RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 PMCHP20382 165 aa14.24□□□□□ -0.13
SQSTM1-211ENST00000506690 ERVK11-1P61568 191 aa14.24□□□□□ -0.13
SQSTM1-211ENST00000506690 ZNF738Q8NE65 137 aa14.24□□□□□ -0.13
SQSTM1-211ENST00000506690 KCNIP1Q9NZI2 227 aa14.24□□□□□ -0.13
SQSTM1-211ENST00000506690 OR10J4P0C629 311 aa14.23□□□□□ -0.13
SQSTM1-211ENST00000506690 CA6P23280 308 aa14.23□□□□□ -0.13
SQSTM1-211ENST00000506690 GCHFRP30047 84 aa14.23□□□□□ -0.13
SQSTM1-211ENST00000506690 FOXG1P55316 489 aaPredicted RBP14.23□□□□□ -0.13
SQSTM1-211ENST00000506690 WIPI1Q5MNZ9 446 aaPredicted RBP14.23□□□□□ -0.13
SQSTM1-211ENST00000506690 GGTLC1Q9BX51 225 aa14.23□□□□□ -0.13
SQSTM1-211ENST00000506690 TUBG2Q9NRH3 451 aa14.23□□□□□ -0.13
SQSTM1-211ENST00000506690 KMT2EQ8IZD2 1858 aa14.23□□□□□ -0.13
SQSTM1-211ENST00000506690 CDIPTO14735 213 aa14.23□□□□□ -0.13
SQSTM1-211ENST00000506690 PDLIM3Q53GG5 364 aaPredicted RBP14.23□□□□□ -0.13
SQSTM1-211ENST00000506690 MIC13Q5XKP0 118 aa14.23□□□□□ -0.13
SQSTM1-211ENST00000506690 FAM53AQ6NSI3 398 aaPredicted RBP14.23□□□□□ -0.13
SQSTM1-211ENST00000506690 UNQ5815/PRO19632Q6UWF5 114 aa14.23□□□□□ -0.13
SQSTM1-211ENST00000506690 Q6ZVH6 145 aa14.23□□□□□ -0.13
SQSTM1-211ENST00000506690 OR2D3Q8NGH3 330 aa14.23□□□□□ -0.13
SQSTM1-211ENST00000506690 WNT10AQ9GZT5 417 aa14.23□□□□□ -0.13
SQSTM1-211ENST00000506690 IGKV3D-15A0A087WSY6 115 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 CEACAM8P31997 349 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 GFRA1P56159 465 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 CLDN18P56856 261 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 TMPRSS3P57727 454 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 COX19Q49B96 90 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 GUSBP11Q6P575 273 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 C19orf35Q6ZS72 473 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 WDR31Q8NA23 367 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 GALMQ96C23 342 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 TAAR6Q96RI8 345 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 ALKBH7Q9BT30 221 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 TRAV34A0A0B4J273 112 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 IGHV2OR16-5A0A0B4J2B6 119 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 PRSS46E5RG02 174 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 CXCL12P48061 93 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 HINT1P49773 126 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 RPP30P78346 268 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 RPL19P84098 196 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 ZNF146Q15072 292 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 KIAA1644Q3SXP7 199 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 AARDQ4LEZ3 155 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 Q8IYB0 196 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 SLC35D1Q9NTN3 355 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 BET1LQ9NYM9 111 aa14.22□□□□□ -0.13
SQSTM1-211ENST00000506690 IGHV2-26A0A0B4J1V2 119 aa14.21□□□□□ -0.13
SQSTM1-211ENST00000506690 P04436 131 aa14.21□□□□□ -0.13
SQSTM1-211ENST00000506690 WDR86Q86TI4 376 aa14.21□□□□□ -0.13
SQSTM1-211ENST00000506690 OR52L2PQ8NGH6 319 aa14.21□□□□□ -0.13
SQSTM1-211ENST00000506690 GUCD1Q96NT3 240 aa14.21□□□□□ -0.13
SQSTM1-211ENST00000506690 UHRF2Q96PU4 802 aa14.21□□□□□ -0.13
SQSTM1-211ENST00000506690 MS4A5Q9H3V2 200 aa14.21□□□□□ -0.13
SQSTM1-211ENST00000506690 OCIAD1Q9NX40 245 aa14.21□□□□□ -0.13
SQSTM1-211ENST00000506690 IGHV2-70DA0A0C4DH43 119 aa14.21□□□□□ -0.14
SQSTM1-211ENST00000506690 C12orf77C9JDV5 145 aa14.21□□□□□ -0.14
SQSTM1-211ENST00000506690 BMPR1BO00238 502 aa14.21□□□□□ -0.14
SQSTM1-211ENST00000506690 KLF7O75840 302 aaPredicted RBP14.21□□□□□ -0.14
SQSTM1-211ENST00000506690 CA2P00918 260 aa14.21□□□□□ -0.14
SQSTM1-211ENST00000506690 ZXDAP98168 799 aa14.21□□□□□ -0.14
SQSTM1-211ENST00000506690 OR5B3Q8NH48 314 aa14.21□□□□□ -0.14
SQSTM1-211ENST00000506690 TSKUQ8WUA8 353 aa14.21□□□□□ -0.14
SQSTM1-211ENST00000506690 LINC00473A8K010 186 aa14.2□□□□□ -0.14
SQSTM1-211ENST00000506690 AREGP15514 252 aa14.2□□□□□ -0.14
SQSTM1-211ENST00000506690 GDF9O60383 454 aa14.2□□□□□ -0.14
SQSTM1-211ENST00000506690 OR9G9P0C7N8 305 aa14.2□□□□□ -0.14
SQSTM1-211ENST00000506690 SRIP30626 198 aa14.2□□□□□ -0.14
SQSTM1-211ENST00000506690 ARR3P36575 388 aa14.2□□□□□ -0.14
SQSTM1-211ENST00000506690 SSPNQ14714 243 aa14.2□□□□□ -0.14
SQSTM1-211ENST00000506690 SCCPDHQ8NBX0 429 aa14.2□□□□□ -0.14
SQSTM1-211ENST00000506690 HES4Q9HCC6 221 aa14.2□□□□□ -0.14
SQSTM1-211ENST00000506690 SEPSECSQ9HD40 501 aaKnown RBP14.2□□□□□ -0.14
SQSTM1-211ENST00000506690 SIT1Q9Y3P8 196 aa14.2□□□□□ -0.14
SQSTM1-211ENST00000506690 SPINK4O60575 86 aa14.19□□□□□ -0.14
SQSTM1-211ENST00000506690 LINC00205P59089 165 aa14.19□□□□□ -0.14
SQSTM1-211ENST00000506690 EFNB3Q15768 340 aa14.19□□□□□ -0.14
SQSTM1-211ENST00000506690 PMCHL1Q16048 86 aa14.19□□□□□ -0.14
SQSTM1-211ENST00000506690 MAJINQ3KP22 176 aa14.19□□□□□ -0.14
SQSTM1-211ENST00000506690 FAM19A2Q8N3H0 131 aa14.19□□□□□ -0.14
SQSTM1-211ENST00000506690 C1orf159Q96HA4 380 aa14.19□□□□□ -0.14
SQSTM1-211ENST00000506690 CDC42EP3Q9UKI2 254 aa14.19□□□□□ -0.14
SQSTM1-211ENST00000506690 LSM4Q9Y4Z0 139 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-211ENST00000506690 RHOBP62745 196 aa14.19□□□□□ -0.14
SQSTM1-211ENST00000506690 FBLN7Q53RD9 439 aa14.19□□□□□ -0.14
SQSTM1-211ENST00000506690 SPATA31B1PQ5VZV4 182 aa14.19□□□□□ -0.14
SQSTM1-211ENST00000506690 PNKDQ8N490 385 aa14.19□□□□□ -0.14
SQSTM1-211ENST00000506690 GSX1Q9H4S2 264 aaPredicted RBP14.19□□□□□ -0.14
SQSTM1-211ENST00000506690 POLDIP2Q9Y2S7 368 aa14.19□□□□□ -0.14
SQSTM1-211ENST00000506690 IGHV1-69-2A0A0G2JMI3 117 aa14.18□□□□□ -0.14
SQSTM1-211ENST00000506690 TMEM30CPA0ZSE6 113 aa14.18□□□□□ -0.14
SQSTM1-211ENST00000506690 K7ESF4 209 aa14.18□□□□□ -0.14
SQSTM1-211ENST00000506690 MT-CO2P00403 227 aa14.18□□□□□ -0.14
SQSTM1-211ENST00000506690 HLA-DQA1P01909 254 aa14.18□□□□□ -0.14
SQSTM1-211ENST00000506690 HBZP02008 142 aa14.18□□□□□ -0.14
SQSTM1-211ENST00000506690 AMY1AP04745 511 aa14.18□□□□□ -0.14
SQSTM1-211ENST00000506690 CENPWQ5EE01 88 aa14.18□□□□□ -0.14
SQSTM1-211ENST00000506690 STUMQ69YW2 141 aa14.18□□□□□ -0.14
SQSTM1-211ENST00000506690 VASH2Q86V25 355 aa14.18□□□□□ -0.14
SQSTM1-211ENST00000506690 ZNF439Q8NDP4 499 aa14.18□□□□□ -0.14
SQSTM1-211ENST00000506690 OR4F17Q8NGA8 305 aa14.18□□□□□ -0.14
SQSTM1-211ENST00000506690 BORCS7Q96B45 105 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms