RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 TBPP20226 339 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 S100GP29377 79 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 TNFSF8P32971 234 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 MYCNOSP40205 109 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 PPP5CP53041 499 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 RAB25P57735 213 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 TPPP2P59282 170 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 SSBP1Q04837 148 aaKnown RBP10.2□□□□□ -0.78
TCOF1-209ENST00000506630 LPCAT3Q6P1A2 487 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 SLC38A6Q8IZM9 456 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 LINC00482Q8N8I6 264 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 ZNF491Q8N8L2 437 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 TMEM229BQ8NBD8 167 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 OR5T1Q8NG75 326 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 MYOZ3Q8TDC0 251 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 C4orf3Q8WVX3 66 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 SRSF12Q8WXF0 261 aaKnown RBP10.2□□□□□ -0.78
TCOF1-209ENST00000506630 RAX2Q96IS3 184 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 RHOVQ96L33 236 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 UBE2E2Q96LR5 201 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 OR5B12Q96R08 314 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 RSRP1Q9BUV0 290 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 GNB4Q9HAV0 340 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 ZNF355PQ9NSJ1 428 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 VSIG4Q9Y279 399 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 K7EIL1 84 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 CCL24O00175 119 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 S1PR2O95136 353 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 RAB3DO95716 219 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 NQO2P16083 231 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 S100A5P33763 92 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 TAS2R31P59538 309 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 SCGB2B2Q4G0G5 96 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 ASPHD1Q5U4P2 390 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 STEAP1BQ6NZ63 245 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 MRPL41Q8IXM3 137 aaKnown RBP10.19□□□□□ -0.78
TCOF1-209ENST00000506630 PUSL1Q8N0Z8 303 aaKnown RBP10.19□□□□□ -0.78
TCOF1-209ENST00000506630 ARRDC1Q8N5I2 433 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 WFDC9Q8NEX5 89 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 OR4D10Q8NGI6 311 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 TMEM167AQ8TBQ9 72 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 CD300LFQ8TDQ1 290 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 MS4A10Q96PG2 267 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 AIFM2Q9BRQ8 373 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 HRASLSQ9HDD0 168 aa10.19□□□□□ -0.78
TCOF1-209ENST00000506630 KMT2CQ8NEZ4 4911 aaKnown RBP10.18□□□□□ -0.78
TCOF1-209ENST00000506630 FABP12A6NFH5 140 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 MSGN1A6NI15 193 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 TRGV3P03979 118 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 CD74P04233 296 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 RPA2P15927 270 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 F2RP25116 425 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 UCP3P55916 312 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 CD69Q07108 199 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 KIAA0141Q14154 515 aaPredicted RBP10.18□□□□□ -0.78
TCOF1-209ENST00000506630 C10orf55Q5SWW7 151 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 OR4A47Q6IF82 309 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 FAAP20Q6NZ36 180 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 TBC1D26Q86UD7 250 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 LHFPL1Q86WI0 220 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 DMBX1Q8NFW5 382 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 OR11H1Q8NG94 326 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 TMEM68Q96MH6 324 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 P2RX4Q99571 388 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 SLA2Q9H6Q3 261 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 COA4Q9NYJ1 87 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 BET1LQ9NYM9 111 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 COMMD9Q9P000 198 aa10.18□□□□□ -0.78
TCOF1-209ENST00000506630 H3BUA1 57 aa10.17□□□□□ -0.78
TCOF1-209ENST00000506630 GSTZ1O43708 216 aaPredicted RBP10.17□□□□□ -0.78
TCOF1-209ENST00000506630 IGHV3-11P01762 117 aa10.17□□□□□ -0.78
TCOF1-209ENST00000506630 RPL27AP46776 148 aaKnown RBP10.17□□□□□ -0.78
TCOF1-209ENST00000506630 ERVK-16P61578 105 aa10.17□□□□□ -0.78
TCOF1-209ENST00000506630 RPL8P62917 257 aaKnown RBP10.17□□□□□ -0.78
TCOF1-209ENST00000506630 DEFA5Q01523 94 aa10.17□□□□□ -0.78
TCOF1-209ENST00000506630 MEF2DQ14814 521 aa10.17□□□□□ -0.78
TCOF1-209ENST00000506630 OR4C16Q8NGL9 310 aa10.17□□□□□ -0.78
TCOF1-209ENST00000506630 OR4A5Q8NH83 315 aa10.17□□□□□ -0.78
TCOF1-209ENST00000506630 DGCR14Q96DF8 476 aaKnown RBP10.17□□□□□ -0.78
TCOF1-209ENST00000506630 RCC1LQ96I51 464 aaKnown RBP10.17□□□□□ -0.78
TCOF1-209ENST00000506630 FYTTD1Q96QD9 318 aaKnown RBP10.17□□□□□ -0.78
TCOF1-209ENST00000506630 SPIN2AQ99865 258 aa10.17□□□□□ -0.78
TCOF1-209ENST00000506630 SPIN2BQ9BPZ2 258 aa10.17□□□□□ -0.78
TCOF1-209ENST00000506630 ALX4Q9H161 411 aaPredicted RBP10.17□□□□□ -0.78
TCOF1-209ENST00000506630 PLEKHA2Q9HB19 425 aa10.17□□□□□ -0.78
TCOF1-209ENST00000506630 SLC2A9Q9NRM0 540 aa10.17□□□□□ -0.78
TCOF1-209ENST00000506630 TMEM140Q9NV12 185 aa10.17□□□□□ -0.78
TCOF1-209ENST00000506630 TENM3Q9P273 2699 aa10.16□□□□□ -0.78
TCOF1-209ENST00000506630 MARCH11A6NNE9 402 aa10.16□□□□□ -0.78
TCOF1-209ENST00000506630 DISC1C4P0D8 188 aa10.16□□□□□ -0.78
TCOF1-209ENST00000506630 I3L521 148 aa10.16□□□□□ -0.78
TCOF1-209ENST00000506630 LGALS1P09382 135 aaKnown RBP10.16□□□□□ -0.78
TCOF1-209ENST00000506630 OR9G9P0C7N8 305 aa10.16□□□□□ -0.78
TCOF1-209ENST00000506630 AKAIN1P0CW23 69 aa10.16□□□□□ -0.78
TCOF1-209ENST00000506630 MYOD1P15172 320 aa10.16□□□□□ -0.78
TCOF1-209ENST00000506630 HLA-GP17693 338 aa10.16□□□□□ -0.78
TCOF1-209ENST00000506630 PI3P19957 117 aa10.16□□□□□ -0.78
TCOF1-209ENST00000506630 MAS1LP35410 378 aa10.16□□□□□ -0.78
TCOF1-209ENST00000506630 LPAR6P43657 344 aa10.16□□□□□ -0.78
TCOF1-209ENST00000506630 POU2AF1Q16633 256 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms