RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 KCTD7Q96MP8 289 aa1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 CST9LQ9H4G1 147 aa1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 HES4Q9HCC6 221 aa1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 HRASLSQ9HDD0 168 aa1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 SPANXB1Q9NS25 103 aaPredicted RBP1.09□□□□□ -2.23
TOPBP1-204ENST00000505804 RTTNQ86VV8 2226 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 COL6A6A6NMZ7 2263 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 KMT2BQ9UMN6 2715 aaPredicted RBP1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 IGHV1-18A0A0C4DH31 117 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 A0A0J9YW62 118 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 GOLGA8KD6RF30 607 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 GOLGA8MH3BSY2 632 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 H3BT86 120 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 CIAO1O76071 339 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 APOMO95445 188 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 RPL28P46779 137 aaKnown RBP1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 CDC34P49427 236 aaPredicted RBP1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 EMP1P54849 157 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 MED21Q13503 144 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 PPP1R1AQ13522 171 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 NNATQ16517 81 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 SBSNQ6UWP8 590 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 TMEM156Q8N614 296 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 OR2T27Q8NH04 317 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 HAVCR2Q8TDQ0 301 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 C10orf105Q8TEF2 133 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 SLC7A6Q92536 515 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 GNPNAT1Q96EK6 184 aaPredicted RBP1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 RETNLBQ9BQ08 111 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 PLEKHJ1Q9NW61 149 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 USE1Q9NZ43 259 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 ANAPC10Q9UM13 185 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 ANGPT4Q9Y264 503 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 SRCAPQ6ZRS2 3230 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 KIF15Q9NS87 1388 aa1.08□□□□□ -2.24
TOPBP1-204ENST00000505804 CUL9Q8IWT3 2517 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 TRAV7A0A075B6U4 112 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 TRAV38-1A0A0B4J264 116 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 TMEM269A0A1B0GVZ9 245 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 H7C2G1 150 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 CREBL2O60519 120 aaPredicted RBP1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 AHSA1O95433 338 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 HLA-DRAP01903 254 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 CRPP02741 224 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 PPBPP02775 128 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 SERPINA7P05543 415 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 S100A6P06703 90 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 OCM2P0CE71 109 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 COX5BP10606 129 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 AKR1C3P42330 323 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 MAGEA2P43356 314 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 MGAT3Q09327 533 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 COQ5Q5HYK3 327 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 SLC36A1Q7Z2H8 476 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 UMODL1-AS1Q8N2C9 162 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 TMEM251Q8N6I4 163 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 CXorf21Q9HAI6 301 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 COQ4Q9Y3A0 265 aa1.07□□□□□ -2.24
TOPBP1-204ENST00000505804 MEIKINA0A087WXM9 373 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 IGKV1D-43A0A0B4J1Z2 117 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 A0A0D9SEW6 157 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 DEXIO95424 95 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 REG1AP05451 166 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 KRT7P08729 469 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 TFPTP0C1Z6 253 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 DDTP30046 118 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 MYL6P60660 151 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 RAB14P61106 215 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 MAGOHP61326 146 aaKnown RBP1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 CST9Q5W186 159 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 C7orf65Q6ZTY9 151 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 FP248Q71RG6 208 aaPredicted RBP1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 CMTM5Q96DZ9 223 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 C8orf76Q96K31 380 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 CYSTM1Q9H1C7 97 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 NAT8Q9UHE5 227 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 PRELID1Q9Y255 219 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 ADCY9O60503 1353 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 MYOFQ9NZM1 2061 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 FREM1Q5H8C1 2179 aa1.06□□□□□ -2.24
TOPBP1-204ENST00000505804 PLB1Q6P1J6 1458 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 M0QZ92 97 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 SLC16A4O15374 487 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 PLA2G10O15496 165 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 NSA2O95478 260 aaKnown RBP1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 C8orf88P0DMB2 117 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 ALDH3A1P30838 453 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 BLVRAP53004 296 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 RPL30P62888 115 aaKnown RBP1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 AKR1C1Q04828 323 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 MLLT11Q13015 90 aaPredicted RBP1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 MOGQ16653 247 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 ACSM3Q53FZ2 586 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 FAM78BQ5VT40 261 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 TNFAIP8L2Q6P589 184 aaPredicted RBP1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 SLC51BQ86UW2 128 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 ZNF565Q8N9K5 539 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 TMEM161BQ8NDZ6 487 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 OR8J2Q8NGG1 315 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 PARD6GQ9BYG4 376 aaPredicted RBP1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms