RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 NUP35Q8NFH5 326 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR8G5Q8NG78 346 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR4K17Q8NGC6 315 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR11H6Q8NGC7 330 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR5AR1Q8NGP9 310 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR1B1Q8NGR6 318 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR2T35Q8NGX2 323 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR4L1Q8NH43 312 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR52N5Q8NH56 324 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 JOSD2Q8TAC2 188 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 SLC25A40Q8TBP6 338 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR51E1Q8TCB6 317 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 FBXO25Q8TCJ0 367 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 BLNKQ8WV28 456 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 TWIST2Q8WVJ9 160 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 PCNPQ8WW12 178 aaKnown RBP1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 RTN4IP1Q8WWV3 396 aaPredicted RBP1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 CRYGNQ8WXF5 182 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 NDRG1Q92597 394 aaKnown RBP1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 PNPLA2Q96AD5 504 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 DDIT4LQ96D03 193 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 STARD4Q96DR4 205 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 MS4A6EQ96DS6 147 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 DYNLL2Q96FJ2 89 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 BMFQ96LC9 184 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 C1orf147Q96MC9 270 aaPredicted RBP1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR4C12Q96R67 309 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 TBX15Q96SF7 602 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 S1PR3Q99500 378 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 GPR21Q99679 349 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 KIR2DL4Q99706 377 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 AGMATQ9BSE5 352 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 PRADC1Q9BSG0 188 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 C16orf70Q9BSU1 422 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 GGTLC1Q9BX51 225 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 TSSK6Q9BXA6 273 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 C1QTNF6Q9BXI9 259 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 SLC25A39Q9BZJ4 359 aaPredicted RBP1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 SMIM3Q9BZL3 60 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 CHIAQ9BZP6 476 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 ATG5Q9H1Y0 275 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 MS4A6AQ9H2W1 248 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 POMKQ9H5K3 350 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 ACOT13Q9NPJ3 140 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 B3GAT2Q9NPZ5 323 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 EXOSC3Q9NQT5 275 aaKnown RBP1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 ASF1BQ9NVP2 202 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 FKBP11Q9NYL4 201 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 CCDC167Q9P0B6 97 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 CTSZQ9UBR2 303 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR5V1Q9UGF6 321 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 SLC2A6Q9UGQ3 507 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF222Q9UK12 451 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 HIGD1AQ9Y241 93 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 RCL1Q9Y2P8 373 aaKnown RBP1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 HDGFL3Q9Y3E1 203 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 MPC1Q9Y5U8 109 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 RFNGQ9Y644 331 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 ENPP4Q9Y6X5 453 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 PARP4Q9UKK3 1724 aaKnown RBP1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 UBR2Q8IWV8 1755 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 FRMPD3Q5JV73 1810 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 KIF13BQ9NQT8 1826 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 ANKRD31Q8N7Z5 1873 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 TANC1Q9C0D5 1861 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF106Q9H2Y7 1883 aaKnown RBP1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 PTPRMP28827 1452 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 SLIT2O94813 1529 aa1.56□□□□□ -2.16
HMGB3P17-201ENST00000504195 KDM6BO15054 1643 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 AHDC1Q5TGY3 1603 aaPredicted RBP1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 CICQ96RK0 1608 aaPredicted RBP1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 MYOM1P52179 1685 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 SHPRHQ149N8 1683 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 PLCH1Q4KWH8 1693 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 RGPD1P0DJD0 1748 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 FMN2Q9NZ56 1722 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 ECM29Q5VYK3 1845 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 TRAV18A0A075B6X5 111 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 A0A1B0GTH9 108 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 TEX50A0A1B0GTY4 177 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 KANTRA0A1W2PQU2 76 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 IGLC7A0M8Q6 106 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 C7orf77A4D0Y5 90 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 RBFOX3A6NFN3 312 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 FOXI3A8MTJ6 420 aaPredicted RBP1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 BBIP1A8MTZ0 92 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 PRSS46E5RG02 174 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 FNDC10F2Z333 226 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 TMEM250H0YL14 139 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 H3BMH7 237 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 H3BQ15 152 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 K7EP34 96 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 SULT2B1O00204 365 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 SAP18O00422 153 aaKnown RBP1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 PLPP1O14494 284 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 OVOL1O14753 267 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 YPEL1O60688 119 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 CLDN11O75508 207 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 DPM2O94777 84 aa1.55□□□□□ -2.16
HMGB3P17-201ENST00000504195 PROSCO94903 275 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms