RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 NPIPB3Q92617 1050 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 TMEM101Q96IK0 257 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 NABP2Q9BQ15 211 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 GP6Q9HCN6 339 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 RBFOX2O43251 390 aaKnown RBP eCLIP6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 HLA-DQA1P01909 254 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 IGHV1-2P23083 117 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 GLRXP35754 106 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 NRIP2Q9BQI9 281 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 S4R3C0 116 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 H0YL77 283 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 CIRBPQ14011 172 aaKnown RBP6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 C1orf162Q8NEQ5 155 aaPredicted RBP6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 OR4X2Q8NGF9 303 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 MRAP2Q96G30 205 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 SGK494Q96LW2 274 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 HIST1H4GQ99525 98 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 AQP10Q96PS8 301 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 ALKBH7Q9BT30 221 aaPredicted RBP6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 KLK15Q9H2R5 256 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 ARID2Q68CP9 1835 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 TRPM6Q9BX84 2022 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 C7orf71A4D174 169 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 PIN1P1O15428 100 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 C1QL1O75973 258 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 VDAC2P45880 294 aaPredicted RBP6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 UCP3P55916 312 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 FAM201AQ5SY85 155 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 ARPC1AQ92747 370 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 DUX3Q96PT4 197 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 FBXL7Q9UJT9 491 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 MRPS16Q9Y3D3 137 aaKnown RBP6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 WDR90Q96KV7 1748 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 SCN3AQ9NY46 2000 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 IGHV3-35A0A0C4DH35 117 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 PRSS2P07478 247 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 IL6RP08887 468 aaPredicted RBP6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 NUTF2P61970 127 aaKnown RBP6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 GCSAMLQ5JQS6 135 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 TMEM105Q8N8V8 129 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 GPR61Q9BZJ8 451 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 FBXL15Q9H469 300 aa6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 FOXA2Q9Y261 457 aaPredicted RBP6.09□□□□□ -1.43
SYNPO2-205ENST00000504178 EIF3GO75821 320 aaKnown RBP eCLIP6.09□□□□□ -1.44
SYNPO2-205ENST00000504178 CEACAM4O75871 244 aa6.09□□□□□ -1.44
SYNPO2-205ENST00000504178 SCGB1A1P11684 91 aa6.09□□□□□ -1.44
SYNPO2-205ENST00000504178 TEX45Q8NA69 505 aa6.09□□□□□ -1.44
SYNPO2-205ENST00000504178 FBLIM1Q8WUP2 373 aa6.09□□□□□ -1.44
SYNPO2-205ENST00000504178 WDYHV1Q96HA8 205 aa6.09□□□□□ -1.44
SYNPO2-205ENST00000504178 PATJQ8NI35 1801 aa6.09□□□□□ -1.44
SYNPO2-205ENST00000504178 IGHV3OR16-13A0A075B7E8 117 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 IGHV3-74A0A0B4J1X5 117 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 C9JCJ5 164 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 RAMP1O60894 148 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 GCHFRP30047 84 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 MBNL2Q5VZF2 373 aaKnown RBP6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 POC1AQ8NBT0 407 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 COL25A1Q9BXS0 654 aaPredicted RBP6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 GEMIN7Q9H840 131 aaKnown RBP6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 LOC107984156A0A0G2JMH3 177 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 TMEM14DPA8MWL7 114 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 ARL17AQ8IVW1 177 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 APCDD1LQ8NCL9 501 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 OR1P1Q8NH06 330 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 ZNF236Q9UL36 1845 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 LEPROTL1O95214 131 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 TRGC2P03986 189 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 CDKN1AP38936 164 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 ASIPP42127 132 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 LINC01590Q5TEZ4 76 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 ABLIM2Q6H8Q1 611 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 OR4A47Q6IF82 309 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 CLEC19AQ6UXS0 136 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 COLCA1Q6ZS62 124 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 KIR2DL4Q99706 377 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 PARLQ9H300 379 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 IGHV3-49A0A0A0MS15 119 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 NPIPB13A6NJU9 1138 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 NPIPB4C9JG80 1138 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 RNASE4P34096 147 aaKnown RBP6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 FAM216BQ8N7L0 139 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 DPM3Q9P2X0 92 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 PEMTQ9UBM1 199 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 KLF4O43474 513 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 OR4D5Q8NGN0 318 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 OR10S1Q8NGN2 331 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 SFRP2Q96HF1 295 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 C7orf69Q9H7B7 122 aa6.08□□□□□ -1.44
SYNPO2-205ENST00000504178 TRBV20OR9-2A0A075B6H5 130 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 A0A0G2JLM5 398 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 OTX1P32242 354 aaPredicted RBP6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 TCF24Q7RTU0 167 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 C9orf106Q8NAJ2 232 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 IFI27L2Q9H2X8 130 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 F11RQ9Y624 299 aaKnown RBP6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 CELA3BP08861 270 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 CLDND2Q8NHS1 167 aa6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 MRPL20Q9BYC9 149 aaKnown RBP6.07□□□□□ -1.44
SYNPO2-205ENST00000504178 TNFRSF18Q9Y5U5 241 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms