RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 BCL2L10Q9HD36 194 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 SLC7A10Q9NS82 523 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 TAS2R5Q9NYW4 299 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 RBM12B-AS1Q9P1G2 102 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 PKIGQ9Y2B9 76 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 CARHSP1Q9Y2V2 147 aaKnown RBP3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 UFC1Q9Y3C8 167 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 ASB4Q9Y574 426 aa3.22□□□□□ -1.89
HMGB1P21-201ENST00000502313 CENPEQ02224 2701 aa3.21□□□□□ -1.89
HMGB1P21-201ENST00000502313 PCM1Q15154 2024 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 UNC79Q9P2D8 2635 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 NBASA2RRP1 2371 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 A0A0G2JMP0 313 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 SLC31A2O15432 143 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 CHST10O43529 356 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 GALR3O60755 368 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 MED6O75586 246 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 ARL6IP5O75915 188 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 KBTBD11O94819 623 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 GADD45GO95257 159 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 IFNA1P01562 189 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 FOLR2P14207 255 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 SLC6A1P30531 599 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR3A4PP47883 348 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 PSMB2P49721 201 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 GZMMP51124 257 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 P2RY4P51582 365 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 RAB5BP61020 215 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 RBX1P62877 108 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 FLI1Q01543 452 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 APOFQ13790 326 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 C1DQ13901 141 aaKnown RBP3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 CDK10Q15131 360 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 GSG1Q2KHT4 349 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 DEFB134Q4QY38 66 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 SLC25A30Q5SVS4 291 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 FAM162BQ5T6X4 162 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 RPL13AP3Q6NVV1 102 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 C18orf65Q6ZTR6 163 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 TMUB2Q71RG4 321 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 NEGR1Q7Z3B1 354 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 TGIF2LYQ8IUE0 185 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 LINC01555Q8NAE3 123 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR4M2Q8NGB6 313 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR4M1Q8NGD0 313 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR4S2Q8NH73 311 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 CCL4L1Q8NHW4 92 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 COQ8AQ8NI60 647 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 RXFP4Q8TDU9 374 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 NPRL2Q8WTW4 380 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 NAT14Q8WUY8 206 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 UCN3Q969E3 161 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 TMBIM1Q969X1 311 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 RMND5BQ96G75 393 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 LINC01587Q99440 93 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF2Q9BSG1 426 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 TMEM243Q9BU79 118 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 SPNS1Q9H2V7 528 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 PTGES2Q9H7Z7 377 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 C14orf105Q9NVL8 296 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 IDI2-AS1Q9NZ38 188 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 DOK5Q9P104 306 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 RPS6KB2Q9UBS0 482 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF223Q9UK11 482 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 SLC35A3Q9Y2D2 325 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 ENPP4Q9Y6X5 453 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 SPTAN1Q13813 2472 aaKnown RBP3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 COL6A6A6NMZ7 2263 aa3.21□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF106Q9H2Y7 1883 aaKnown RBP3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 IGHV3-35A0A0C4DH35 117 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 ARRDC5A6NEK1 342 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 EFCAB10A6NFE3 127 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 CCDC160A6NGH7 325 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR11H12B2RN74 326 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 PRSS44E7EML9 344 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 TSTD3H0UI37 97 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 GPR31O00270 319 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 FAAHO00519 579 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 PSPHP1O15172 72 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 TPST1O60507 370 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 ATG12O94817 140 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 KCNK2O95069 426 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 YIF1AO95070 293 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 HMGN2P05204 90 aaKnown RBP3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 ATP5G1P05496 136 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR12D1P0DN82 309 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 CPMP14384 443 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 NELFEP18615 380 aaKnown RBP3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 GABRA3P34903 492 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 SERPINB10P48595 397 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF133P52736 654 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 CXCL6P80162 114 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 DCDP81605 110 aaKnown RBP3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF45Q02386 682 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 NSDHLQ15738 373 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZFP69Q49AA0 526 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 LRRC10Q5BKY1 277 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 OTPQ5XKR4 325 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 GUSBP11Q6P575 273 aa3.2□□□□□ -1.9
HMGB1P21-201ENST00000502313 NOTCH2NLQ7Z3S9 236 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms