RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 IL6RP08887 468 aaPredicted RBP6.7□□□□□ -1.34
CCDC171-209ENST00000498725 DEFA4P12838 97 aa6.7□□□□□ -1.34
CCDC171-209ENST00000498725 CRHBPP24387 322 aa6.7□□□□□ -1.34
CCDC171-209ENST00000498725 MAPK3P27361 379 aaPredicted RBP6.7□□□□□ -1.34
CCDC171-209ENST00000498725 DUTP33316 252 aaKnown RBP6.7□□□□□ -1.34
CCDC171-209ENST00000498725 TFPI2P48307 235 aa6.7□□□□□ -1.34
CCDC171-209ENST00000498725 MFAP2P55001 183 aa6.7□□□□□ -1.34
CCDC171-209ENST00000498725 TAS2R43P59537 309 aa6.7□□□□□ -1.34
CCDC171-209ENST00000498725 MRPS15P82914 257 aaKnown RBP6.7□□□□□ -1.34
CCDC171-209ENST00000498725 QRFPP83859 136 aa6.7□□□□□ -1.34
CCDC171-209ENST00000498725 ST3GAL4Q11206 333 aa6.7□□□□□ -1.34
CCDC171-209ENST00000498725 ACSM3Q53FZ2 586 aa6.7□□□□□ -1.34
CCDC171-209ENST00000498725 ZNF485Q8NCK3 441 aa6.7□□□□□ -1.34
CCDC171-209ENST00000498725 ZNF555Q8NEP9 628 aa6.7□□□□□ -1.34
CCDC171-209ENST00000498725 OSR1Q8TAX0 266 aaPredicted RBP6.7□□□□□ -1.34
CCDC171-209ENST00000498725 SPAG8Q99932 426 aaPredicted RBP6.7□□□□□ -1.34
CCDC171-209ENST00000498725 GINS4Q9BRT9 223 aa6.7□□□□□ -1.34
CCDC171-209ENST00000498725 C9orf16Q9BUW7 83 aa6.7□□□□□ -1.34
CCDC171-209ENST00000498725 PLGRKTQ9HBL7 147 aa6.7□□□□□ -1.34
CCDC171-209ENST00000498725 MRPL27Q9P0M9 148 aaKnown RBP6.7□□□□□ -1.34
CCDC171-209ENST00000498725 UFC1Q9Y3C8 167 aa6.7□□□□□ -1.34
CCDC171-209ENST00000498725 A0A075B6Q4 140 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 A0A1B0GW64 132 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 OR4C46A6NHA9 309 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 NPIPB5A8MRT5 1133 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 MPTX1A8MV57 137 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 TSPAN4O14817 238 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 MYL12BO14950 172 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 BPNT1O95861 308 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 CTSDP07339 412 aaPredicted RBP6.69□□□□□ -1.34
CCDC171-209ENST00000498725 C8orf88P0DMB2 117 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 PSMB6P28072 239 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 SERPINB10P48595 397 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 PSMD7P51665 324 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 CLDN12P56749 244 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 TTC23Q5W5X9 447 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 LAMTOR1Q6IAA8 161 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 PLET1Q6UQ28 207 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 KCTD9Q7L273 389 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 SSX9Q7RTT3 188 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 GVQW1Q8N7I0 195 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 OR4A5Q8NH83 315 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 MARC2Q969Z3 335 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 ADTRPQ96IZ2 230 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 C20orf24Q9BUV8 137 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 C6orf62Q9GZU0 229 aaPredicted RBP6.69□□□□□ -1.34
CCDC171-209ENST00000498725 CSTL1Q9H114 145 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 OR51E2Q9H255 320 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 C5orf66Q9H5L9 145 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 HSF4Q9ULV5 492 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 DNAH6Q9C0G6 4158 aa6.69□□□□□ -1.34
CCDC171-209ENST00000498725 TRBV6-7A0A0A0MS04 114 aa6.68□□□□□ -1.34
CCDC171-209ENST00000498725 TRBV7-1A0A0A6YYK4 115 aa6.68□□□□□ -1.34
CCDC171-209ENST00000498725 IGHV3-21A0A0B4J1V1 117 aa6.68□□□□□ -1.34
CCDC171-209ENST00000498725 DHFRP00374 187 aa6.68□□□□□ -1.34
CCDC171-209ENST00000498725 FCGR3AP08637 254 aa6.68□□□□□ -1.34
CCDC171-209ENST00000498725 RASSF2P50749 326 aa6.68□□□□□ -1.34
CCDC171-209ENST00000498725 RPL30P62888 115 aaKnown RBP6.68□□□□□ -1.34
CCDC171-209ENST00000498725 PLAC9Q5JTB6 97 aa6.68□□□□□ -1.34
CCDC171-209ENST00000498725 ZNF575Q86XF7 245 aa6.68□□□□□ -1.34
CCDC171-209ENST00000498725 FAM89BQ8N5H3 189 aa6.68□□□□□ -1.34
CCDC171-209ENST00000498725 SETD9Q8NE22 299 aa6.68□□□□□ -1.34
CCDC171-209ENST00000498725 CYGBQ8WWM9 190 aa6.68□□□□□ -1.34
CCDC171-209ENST00000498725 CABLES2Q9BTV7 478 aa6.68□□□□□ -1.34
CCDC171-209ENST00000498725 C11orf68Q9H3H3 251 aaKnown RBP6.68□□□□□ -1.34
CCDC171-209ENST00000498725 SLC2A9Q9NRM0 540 aa6.68□□□□□ -1.34
CCDC171-209ENST00000498725 IGHV4-4A0A075B6R2 117 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 IGHV3-49A0A0A0MS15 119 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 EFCAB10A6NFE3 127 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 OR2T8A6NH00 312 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 FOXI3A8MTJ6 420 aaPredicted RBP6.67□□□□□ -1.34
CCDC171-209ENST00000498725 RTL8CO15255 209 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 KBTBD11O94819 623 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 CA1P00915 261 aaPredicted RBP6.67□□□□□ -1.34
CCDC171-209ENST00000498725 ZNF735P0CB33 412 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 HIST1H1BP16401 226 aaKnown RBP6.67□□□□□ -1.34
CCDC171-209ENST00000498725 GALP22466 123 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 ELLP55199 621 aaPredicted RBP6.67□□□□□ -1.34
CCDC171-209ENST00000498725 WNT4P56705 351 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 TCTAP57738 103 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 PLA2G7Q13093 441 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 HSD17B12Q53GQ0 312 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 GBGT1Q8N5D6 347 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 OR56B1Q8NGI3 324 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 TCTEX1D2Q8WW35 142 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 CXorf58Q96LI9 332 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 OR2A7Q96R45 310 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 GPHA2Q96T91 129 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 MRPS7Q9Y2R9 242 aaKnown RBP6.67□□□□□ -1.34
CCDC171-209ENST00000498725 PRELID3BQ9Y3B1 194 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 AK6Q9Y3D8 172 aaKnown RBP6.67□□□□□ -1.34
CCDC171-209ENST00000498725 ABCA13Q86UQ4 5058 aa6.67□□□□□ -1.34
CCDC171-209ENST00000498725 IGLV11-55A0A075B6I3 123 aa6.66□□□□□ -1.34
CCDC171-209ENST00000498725 TGOLN2O43493 480 aa6.66□□□□□ -1.34
CCDC171-209ENST00000498725 DENRO43583 198 aaKnown RBP6.66□□□□□ -1.34
CCDC171-209ENST00000498725 CRYGCP07315 174 aa6.66□□□□□ -1.34
CCDC171-209ENST00000498725 HLA-DMBP28068 263 aa6.66□□□□□ -1.34
CCDC171-209ENST00000498725 ARFRP1Q13795 201 aa6.66□□□□□ -1.34
CCDC171-209ENST00000498725 RAB11BQ15907 218 aa6.66□□□□□ -1.34
CCDC171-209ENST00000498725 AHSA2Q719I0 299 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms