RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 HOXA3O43365 443 aaPredicted RBP7.42□□□□□ -1.22
FN1-227ENST00000498719 IGLV2-14P01704 120 aa7.42□□□□□ -1.22
FN1-227ENST00000498719 MT-ND4LP03901 98 aa7.42□□□□□ -1.22
FN1-227ENST00000498719 KITLGP21583 273 aa7.42□□□□□ -1.22
FN1-227ENST00000498719 PAX6P26367 422 aa7.42□□□□□ -1.22
FN1-227ENST00000498719 PLA2G5P39877 138 aa7.42□□□□□ -1.22
FN1-227ENST00000498719 MEOX1P50221 254 aa7.42□□□□□ -1.22
FN1-227ENST00000498719 ZNF415Q09FC8 603 aa7.42□□□□□ -1.22
FN1-227ENST00000498719 ASCL5Q7RTU5 278 aa7.42□□□□□ -1.22
FN1-227ENST00000498719 TTC28Q96AY4 2481 aa7.42□□□□□ -1.22
FN1-227ENST00000498719 SGK494Q96LW2 274 aa7.42□□□□□ -1.22
FN1-227ENST00000498719 SLC25A31Q9H0C2 315 aa7.42□□□□□ -1.22
FN1-227ENST00000498719 OR2W1Q9Y3N9 320 aa7.42□□□□□ -1.22
FN1-227ENST00000498719 ICE1Q9Y2F5 2266 aa7.42□□□□□ -1.22
FN1-227ENST00000498719 K7EN84 100 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 SIRPB1O00241 398 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 IGKV1-39P01597 117 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 IGKV1D-39P04432 117 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 ZNF14P17017 642 aaPredicted RBP7.41□□□□□ -1.22
FN1-227ENST00000498719 RAB5AP20339 215 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 APLNRP35414 380 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 ARR3P36575 388 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 NBL1P41271 181 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 RPS23P62266 143 aaKnown RBP7.41□□□□□ -1.22
FN1-227ENST00000498719 GNG3P63215 75 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 SRSF7Q16629 238 aaKnown RBP eCLIP7.41□□□□□ -1.22
FN1-227ENST00000498719 SLC16A13Q7RTY0 426 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 WDR86Q86TI4 376 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 MDP1Q86V88 176 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 OR1J1Q8NGS3 322 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 MRPL18Q9H0U6 180 aaKnown RBP7.41□□□□□ -1.22
FN1-227ENST00000498719 DCHS1Q96JQ0 3298 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 CADP27708 2225 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 IAPPP10997 89 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 HLA-DRB3P79483 266 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 FAM53AQ6NSI3 398 aaPredicted RBP7.41□□□□□ -1.22
FN1-227ENST00000498719 H1FOOQ8IZA3 346 aaPredicted RBP7.41□□□□□ -1.22
FN1-227ENST00000498719 CYB561D1Q8N8Q1 229 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 BAALCQ8WXS3 180 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 TMEM37Q8WXS4 190 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 DDA1Q9BW61 102 aa7.41□□□□□ -1.22
FN1-227ENST00000498719 INTS1Q8N201 2190 aaKnown RBP7.4□□□□□ -1.22
FN1-227ENST00000498719 SRRM4A7MD48 611 aaKnown RBP7.4□□□□□ -1.22
FN1-227ENST00000498719 DEGS1O15121 323 aa7.4□□□□□ -1.22
FN1-227ENST00000498719 GP9P14770 177 aa7.4□□□□□ -1.22
FN1-227ENST00000498719 FABP9Q0Z7S8 132 aa7.4□□□□□ -1.22
FN1-227ENST00000498719 CDSNQ15517 529 aa7.4□□□□□ -1.22
FN1-227ENST00000498719 RNF212Q495C1 297 aa7.4□□□□□ -1.22
FN1-227ENST00000498719 Q6P435 159 aa7.4□□□□□ -1.22
FN1-227ENST00000498719 LFNGQ8NES3 379 aa7.4□□□□□ -1.22
FN1-227ENST00000498719 OR1K1Q8NGR3 316 aa7.4□□□□□ -1.22
FN1-227ENST00000498719 RNASE11Q8TAA1 199 aaKnown RBP7.4□□□□□ -1.22
FN1-227ENST00000498719 OR51I2Q9H344 312 aa7.4□□□□□ -1.22
FN1-227ENST00000498719 VSIRQ9H7M9 311 aa7.4□□□□□ -1.22
FN1-227ENST00000498719 CACNG5Q9UF02 275 aa7.4□□□□□ -1.22
FN1-227ENST00000498719 H3BQ15 152 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 WDR1O75083 606 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 IFNA4P05014 189 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 SP1P08047 785 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 SRP19P09132 144 aaKnown RBP7.4□□□□□ -1.23
FN1-227ENST00000498719 METTL15P1P0C7V9 234 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 CD81P60033 236 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 ARL16Q0P5N6 197 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 ICAM4Q14773 271 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 RHEBQ15382 184 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 AKR1C8PQ5T2L2 129 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 ZNF343Q6P1L6 599 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 ZNF561Q8N587 486 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 OR10V1Q8NGI7 309 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 RNASEH2CQ8TDP1 164 aaKnown RBP7.4□□□□□ -1.23
FN1-227ENST00000498719 NEU4Q8WWR8 484 aaPredicted RBP7.4□□□□□ -1.23
FN1-227ENST00000498719 ATP5SQ99766 215 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 OR2J1Q9GZK6 312 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 TUBA4BQ9H853 241 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 MPC1Q9Y5U8 109 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 CEP250Q9BV73 2442 aa7.4□□□□□ -1.23
FN1-227ENST00000498719 DUXBA0A1W2PPF3 345 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 OR5B21A6NL26 309 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 CDIPTO14735 213 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 WISP2O76076 250 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 OR2H2O95918 312 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 IGKV1-5P01602 117 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 TFF1P04155 84 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 BAXQ07812 192 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 SP5Q6BEB4 398 aaPredicted RBP7.39□□□□□ -1.23
FN1-227ENST00000498719 ZNF880Q6PDB4 577 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 DHRS13Q6UX07 377 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 SCCPDHQ8NBX0 429 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 ZNF503Q96F45 646 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 OR51M1Q9H341 326 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 SPRR3Q9UBC9 169 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 KCNS2Q9ULS6 477 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 RBM7Q9Y580 266 aaKnown RBP7.39□□□□□ -1.23
FN1-227ENST00000498719 A0A1B0GW64 132 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 PLA2G1BP04054 148 aaKnown RBP7.39□□□□□ -1.23
FN1-227ENST00000498719 OR8U8P0C7N1 319 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 GATA3P23771 443 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 IDH3GP51553 393 aaPredicted RBP7.39□□□□□ -1.23
FN1-227ENST00000498719 SLC10A1Q14973 349 aa7.39□□□□□ -1.23
FN1-227ENST00000498719 ZNF585BQ52M93 769 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms