RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 HES5Q5TA89 166 aa10.9□□□□□ -0.66
TRAF4-212ENST00000498540 LGALS9CQ6DKI2 356 aa10.9□□□□□ -0.66
TRAF4-212ENST00000498540 OR4A47Q6IF82 309 aa10.9□□□□□ -0.66
TRAF4-212ENST00000498540 PHLDA1Q8WV24 401 aaPredicted RBP10.9□□□□□ -0.66
TRAF4-212ENST00000498540 UFD1Q92890 307 aa10.9□□□□□ -0.66
TRAF4-212ENST00000498540 EEF1AKMT3Q96AZ1 226 aa10.9□□□□□ -0.66
TRAF4-212ENST00000498540 OR51E2Q9H255 320 aa10.9□□□□□ -0.66
TRAF4-212ENST00000498540 RAB22AQ9UL26 194 aa10.9□□□□□ -0.66
TRAF4-212ENST00000498540 TRAV25A0A0B4J276 109 aa10.89□□□□□ -0.67
TRAF4-212ENST00000498540 REG1AP05451 166 aa10.89□□□□□ -0.67
TRAF4-212ENST00000498540 CRYGCP07315 174 aa10.89□□□□□ -0.67
TRAF4-212ENST00000498540 C8orf88P0DMB2 117 aa10.89□□□□□ -0.67
TRAF4-212ENST00000498540 PSMB6P28072 239 aa10.89□□□□□ -0.67
TRAF4-212ENST00000498540 ARFRP1Q13795 201 aa10.89□□□□□ -0.67
TRAF4-212ENST00000498540 ZNF585BQ52M93 769 aa10.89□□□□□ -0.67
TRAF4-212ENST00000498540 RBPMS2Q6ZRY4 209 aaKnown RBP10.89□□□□□ -0.67
TRAF4-212ENST00000498540 OR2C3Q8N628 320 aa10.89□□□□□ -0.67
TRAF4-212ENST00000498540 ZNF645Q8N7E2 425 aa10.89□□□□□ -0.67
TRAF4-212ENST00000498540 OR10R2Q8NGX6 335 aa10.89□□□□□ -0.67
TRAF4-212ENST00000498540 TMEM167AQ8TBQ9 72 aa10.89□□□□□ -0.67
TRAF4-212ENST00000498540 RNF183Q96D59 192 aa10.89□□□□□ -0.67
TRAF4-212ENST00000498540 OR2A7Q96R45 310 aa10.89□□□□□ -0.67
TRAF4-212ENST00000498540 C8orf4Q9NR00 106 aa10.89□□□□□ -0.67
TRAF4-212ENST00000498540 IGHV3-35A0A0C4DH35 117 aa10.88□□□□□ -0.67
TRAF4-212ENST00000498540 PTGES3LE9PB15 166 aa10.88□□□□□ -0.67
TRAF4-212ENST00000498540 RAB27BO00194 218 aa10.88□□□□□ -0.67
TRAF4-212ENST00000498540 ARL6IP5O75915 188 aa10.88□□□□□ -0.67
TRAF4-212ENST00000498540 S1PR2O95136 353 aa10.88□□□□□ -0.67
TRAF4-212ENST00000498540 IGLV2-14P01704 120 aa10.88□□□□□ -0.67
TRAF4-212ENST00000498540 CLEC3BP05452 202 aa10.88□□□□□ -0.67
TRAF4-212ENST00000498540 MYOD1P15172 320 aa10.88□□□□□ -0.67
TRAF4-212ENST00000498540 HIST1H1DP16402 221 aaKnown RBP10.88□□□□□ -0.67
TRAF4-212ENST00000498540 CTRB1P17538 263 aa10.88□□□□□ -0.67
TRAF4-212ENST00000498540 CALRP27797 417 aaKnown RBP10.88□□□□□ -0.67
TRAF4-212ENST00000498540 KLK9Q2XQG4 91 aa10.88□□□□□ -0.67
TRAF4-212ENST00000498540 CTRB2Q6GPI1 263 aa10.88□□□□□ -0.67
TRAF4-212ENST00000498540 PUSL1Q8N0Z8 303 aaKnown RBP10.88□□□□□ -0.67
TRAF4-212ENST00000498540 MARC2Q969Z3 335 aa10.88□□□□□ -0.67
TRAF4-212ENST00000498540 KLK9Q9UKQ9 250 aa10.88□□□□□ -0.67
TRAF4-212ENST00000498540 ELF5Q9UKW6 265 aaPredicted RBP10.88□□□□□ -0.67
TRAF4-212ENST00000498540 MRPS7Q9Y2R9 242 aaKnown RBP10.88□□□□□ -0.67
TRAF4-212ENST00000498540 RBMX2Q9Y388 322 aaKnown RBP10.88□□□□□ -0.67
TRAF4-212ENST00000498540 PRELID3BQ9Y3B1 194 aa10.88□□□□□ -0.67
TRAF4-212ENST00000498540 V9GY05 133 aa10.88□□□□□ -0.67
TRAF4-212ENST00000498540 IGLV11-55A0A075B6I3 123 aa10.87□□□□□ -0.67
TRAF4-212ENST00000498540 IGKV1D-13A0A0B4J2D9 117 aa10.87□□□□□ -0.67
TRAF4-212ENST00000498540 UBE2CO00762 179 aa10.87□□□□□ -0.67
TRAF4-212ENST00000498540 IGKV1-13P0DP09 117 aa10.87□□□□□ -0.67
TRAF4-212ENST00000498540 NFYAP23511 347 aaPredicted RBP10.87□□□□□ -0.67
TRAF4-212ENST00000498540 GADD45AP24522 165 aa10.87□□□□□ -0.67
TRAF4-212ENST00000498540 GPR183P32249 361 aa10.87□□□□□ -0.67
TRAF4-212ENST00000498540 BRWD1-AS2P59051 145 aa10.87□□□□□ -0.67
TRAF4-212ENST00000498540 IRF3Q14653 427 aa10.87□□□□□ -0.67
TRAF4-212ENST00000498540 ODF3L2Q3SX64 289 aa10.87□□□□□ -0.67
TRAF4-212ENST00000498540 Q6ZS49 121 aa10.87□□□□□ -0.67
TRAF4-212ENST00000498540 SLC38A6Q8IZM9 456 aa10.87□□□□□ -0.67
TRAF4-212ENST00000498540 OR4S2Q8NH73 311 aa10.87□□□□□ -0.67
TRAF4-212ENST00000498540 VSTM2AQ8TAG5 236 aa10.87□□□□□ -0.67
TRAF4-212ENST00000498540 SPAG8Q99932 426 aaPredicted RBP10.87□□□□□ -0.67
TRAF4-212ENST00000498540 MRPL27Q9P0M9 148 aaKnown RBP10.87□□□□□ -0.67
TRAF4-212ENST00000498540 TRBV7-1A0A0A6YYK4 115 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 KIR2DL5BA0A0G2JN68 375 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 KIR2DL5BA0A0G2JPC4 375 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 CGB1A6NKQ9 187 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 DHFRP00374 187 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 HSMCR30P0CW71 290 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 HIST1H1BP16401 226 aaKnown RBP10.86□□□□□ -0.67
TRAF4-212ENST00000498540 CD36P16671 472 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 RPL35AP18077 110 aaKnown RBP10.86□□□□□ -0.67
TRAF4-212ENST00000498540 GALP22466 123 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 FCGR2BP31994 310 aaPredicted RBP10.86□□□□□ -0.67
TRAF4-212ENST00000498540 MAS1LP35410 378 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 TALDO1P37837 337 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 PRR20EP86478 221 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 PRR20CP86479 221 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 PRR20DP86480 221 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 PRR20BP86481 221 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 PRR20AP86496 221 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 FABP5Q01469 135 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 EIF4EBP1Q13541 118 aaPredicted RBP10.86□□□□□ -0.67
TRAF4-212ENST00000498540 SSX9Q7RTT3 188 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 KIR2DL5AQ8N109 375 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 TMEM217Q8N7C4 229 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 STPG3Q8N7X2 389 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 KIR2DL5BQ8NHK3 375 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 TCTEX1D2Q8WW35 142 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 C5orf66Q9H5L9 145 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 OR2W1Q9Y3N9 320 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 KIAA1109Q2LD37 5005 aa10.86□□□□□ -0.67
TRAF4-212ENST00000498540 TSPAN4O14817 238 aa10.85□□□□□ -0.67
TRAF4-212ENST00000498540 HLA-DQB1P01920 261 aa10.85□□□□□ -0.67
TRAF4-212ENST00000498540 DEFA4P12838 97 aa10.85□□□□□ -0.67
TRAF4-212ENST00000498540 CRHBPP24387 322 aa10.85□□□□□ -0.67
TRAF4-212ENST00000498540 PSMD7P51665 324 aa10.85□□□□□ -0.67
TRAF4-212ENST00000498540 ELLP55199 621 aaPredicted RBP10.85□□□□□ -0.67
TRAF4-212ENST00000498540 OR10A3P58181 314 aa10.85□□□□□ -0.67
TRAF4-212ENST00000498540 TRAM1Q15629 374 aa10.85□□□□□ -0.67
TRAF4-212ENST00000498540 ZNF502Q8TBZ5 544 aa10.85□□□□□ -0.67
TRAF4-212ENST00000498540 GATAD1Q8WUU5 269 aa10.85□□□□□ -0.67
TRAF4-212ENST00000498540 CXorf58Q96LI9 332 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms