RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 RUNX1Q01196 453 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 IL18Q14116 193 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 RNASE10Q5GAN6 216 aaKnown RBP9.94□□□□□ -0.82
HSPG2-213ENST00000498495 KPRPQ5T749 579 aaPredicted RBP9.94□□□□□ -0.82
HSPG2-213ENST00000498495 FOXB2Q5VYV0 432 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 PUSL1Q8N0Z8 303 aaKnown RBP9.94□□□□□ -0.82
HSPG2-213ENST00000498495 MCFD2Q8NI22 146 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 TMEM167AQ8TBQ9 72 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 SPIN2AQ99865 258 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 SPIN2BQ9BPZ2 258 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 GPR61Q9BZJ8 451 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 SLIRPQ9GZT3 109 aaKnown RBP9.94□□□□□ -0.82
HSPG2-213ENST00000498495 FXYD6Q9H0Q3 95 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 HRASLSQ9HDD0 168 aa9.94□□□□□ -0.82
HSPG2-213ENST00000498495 A0A0G2JLM5 398 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 IGHV3-11P01762 117 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 CD3DP04234 171 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 RLN1P04808 185 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 OR8U8P0C7N1 319 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 F2RP25116 425 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 MAS1LP35410 378 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 UCP3P55916 312 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 TAS2R19P59542 299 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 SSBP1Q04837 148 aaKnown RBP9.93□□□□□ -0.82
HSPG2-213ENST00000498495 ZNF616Q08AN1 781 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 PHLDA2Q53GA4 152 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 PDLIM3Q53GG5 364 aaPredicted RBP9.93□□□□□ -0.82
HSPG2-213ENST00000498495 ASPHD1Q5U4P2 390 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 OR4A47Q6IF82 309 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 TMEM229BQ8NBD8 167 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 DMBX1Q8NFW5 382 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 OR4A5Q8NH83 315 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 DGCR14Q96DF8 476 aaKnown RBP9.93□□□□□ -0.82
HSPG2-213ENST00000498495 FYTTD1Q96QD9 318 aaKnown RBP9.93□□□□□ -0.82
HSPG2-213ENST00000498495 RSRP1Q9BUV0 290 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 TINAGL1Q9GZM7 467 aaPredicted RBP9.93□□□□□ -0.82
HSPG2-213ENST00000498495 ALX4Q9H161 411 aaPredicted RBP9.93□□□□□ -0.82
HSPG2-213ENST00000498495 PLEKHA2Q9HB19 425 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 COA4Q9NYJ1 87 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 BET1LQ9NYM9 111 aa9.93□□□□□ -0.82
HSPG2-213ENST00000498495 VWFP04275 2813 aa9.92□□□□□ -0.82
HSPG2-213ENST00000498495 C13orf42A0A1B0GVH6 325 aa9.92□□□□□ -0.82
HSPG2-213ENST00000498495 FABP12A6NFH5 140 aa9.92□□□□□ -0.82
HSPG2-213ENST00000498495 BRI3O95415 125 aa9.92□□□□□ -0.82
HSPG2-213ENST00000498495 PRB2P02812 416 aaPredicted RBP9.92□□□□□ -0.82
HSPG2-213ENST00000498495 LGALS1P09382 135 aaKnown RBP9.92□□□□□ -0.82
HSPG2-213ENST00000498495 OR9G9P0C7N8 305 aa9.92□□□□□ -0.82
HSPG2-213ENST00000498495 TBPP20226 339 aa9.92□□□□□ -0.82
HSPG2-213ENST00000498495 TNFSF8P32971 234 aa9.92□□□□□ -0.82
HSPG2-213ENST00000498495 LPAR6P43657 344 aa9.92□□□□□ -0.82
HSPG2-213ENST00000498495 RPL8P62917 257 aaKnown RBP9.92□□□□□ -0.82
HSPG2-213ENST00000498495 DGCR2P98153 550 aa9.92□□□□□ -0.82
HSPG2-213ENST00000498495 SLC38A6Q8IZM9 456 aa9.92□□□□□ -0.82
HSPG2-213ENST00000498495 ARRDC1Q8N5I2 433 aa9.92□□□□□ -0.82
HSPG2-213ENST00000498495 RSL24D1Q9UHA3 163 aaKnown RBP9.92□□□□□ -0.82
HSPG2-213ENST00000498495 DPPA5A6NC42 116 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 LINC01619G3V211 115 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 UPK2O00526 184 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 CTDSPLO15194 276 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 S1PR2O95136 353 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 RAB3DO95716 219 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 HSPB1P04792 205 aaKnown RBP9.91□□□□□ -0.82
HSPG2-213ENST00000498495 PGAM2P15259 253 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 RPA2P15927 270 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 RPL27AP46776 148 aaKnown RBP9.91□□□□□ -0.82
HSPG2-213ENST00000498495 ERVK-16P61578 105 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 FHL3Q13643 280 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 POU2AF1Q16633 256 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 C10orf55Q5SWW7 151 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 STEAP1BQ6NZ63 245 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 REC114Q7Z4M0 266 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 SLC25A42Q86VD7 318 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 TTC9CQ8N5M4 171 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 USMG5Q96IX5 58 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 NXF2Q9GZY0 626 aaKnown RBP9.91□□□□□ -0.82
HSPG2-213ENST00000498495 COMMD9Q9P000 198 aa9.91□□□□□ -0.82
HSPG2-213ENST00000498495 IGHV4OR15-8A0A075B7B6 117 aa9.9□□□□□ -0.82
HSPG2-213ENST00000498495 A0A087WW49 117 aa9.9□□□□□ -0.82
HSPG2-213ENST00000498495 HMX3A6NHT5 357 aa9.9□□□□□ -0.82
HSPG2-213ENST00000498495 E7EUB6 86 aa9.9□□□□□ -0.82
HSPG2-213ENST00000498495 KRASP01116 189 aa9.9□□□□□ -0.82
HSPG2-213ENST00000498495 CD74P04233 296 aa9.9□□□□□ -0.82
HSPG2-213ENST00000498495 IL6RP08887 468 aaPredicted RBP9.9□□□□□ -0.82
HSPG2-213ENST00000498495 HLA-GP17693 338 aa9.9□□□□□ -0.82
HSPG2-213ENST00000498495 HOXD3P31249 432 aaPredicted RBP9.9□□□□□ -0.82
HSPG2-213ENST00000498495 SCGB2B2Q4G0G5 96 aa9.9□□□□□ -0.82
HSPG2-213ENST00000498495 C9orf66Q5T8R8 295 aa9.9□□□□□ -0.82
HSPG2-213ENST00000498495 TBC1D26Q86UD7 250 aa9.9□□□□□ -0.82
HSPG2-213ENST00000498495 LHFPL1Q86WI0 220 aa9.9□□□□□ -0.82
HSPG2-213ENST00000498495 ADAD2Q8NCV1 583 aaKnown RBP9.9□□□□□ -0.82
HSPG2-213ENST00000498495 TERB2Q8NHR7 220 aa9.9□□□□□ -0.82
HSPG2-213ENST00000498495 SMIM4Q8WVI0 70 aa9.9□□□□□ -0.82
HSPG2-213ENST00000498495 COMMD5Q9GZQ3 224 aa9.9□□□□□ -0.82
HSPG2-213ENST00000498495 RANGRFQ9HD47 186 aaPredicted RBP9.9□□□□□ -0.82
HSPG2-213ENST00000498495 SLC2A9Q9NRM0 540 aa9.9□□□□□ -0.82
HSPG2-213ENST00000498495 TMEM140Q9NV12 185 aa9.9□□□□□ -0.82
HSPG2-213ENST00000498495 TRAV3A0A0B4J244 114 aa9.89□□□□□ -0.83
HSPG2-213ENST00000498495 SEC14L6B5MCN3 397 aa9.89□□□□□ -0.83
HSPG2-213ENST00000498495 DISC1C4P0D8 188 aa9.89□□□□□ -0.83
HSPG2-213ENST00000498495 ZNF701M0R085 212 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms