RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 HLA-DMAP28067 261 aa14.14□□□□□ -0.15
HOXD11-202ENST00000498438 HRH1P35367 487 aa14.14□□□□□ -0.15
HOXD11-202ENST00000498438 DCTN2Q13561 401 aaKnown RBP14.14□□□□□ -0.15
HOXD11-202ENST00000498438 AADACL3Q5VUY0 350 aa14.14□□□□□ -0.15
HOXD11-202ENST00000498438 ACSM6Q6P461 480 aa14.14□□□□□ -0.15
HOXD11-202ENST00000498438 MOB3AQ96BX8 217 aa14.14□□□□□ -0.15
HOXD11-202ENST00000498438 USMG5Q96IX5 58 aa14.14□□□□□ -0.15
HOXD11-202ENST00000498438 SCPEP1Q9HB40 452 aa14.14□□□□□ -0.15
HOXD11-202ENST00000498438 RANGRFQ9HD47 186 aaPredicted RBP14.14□□□□□ -0.15
HOXD11-202ENST00000498438 ZNF256Q9Y2P7 627 aaPredicted RBP14.14□□□□□ -0.15
HOXD11-202ENST00000498438 COL7A1Q02388 2944 aa14.13□□□□□ -0.15
HOXD11-202ENST00000498438 HMX3A6NHT5 357 aa14.13□□□□□ -0.15
HOXD11-202ENST00000498438 TEX22C9J3V5 150 aa14.13□□□□□ -0.15
HOXD11-202ENST00000498438 GNRHRP30968 328 aa14.13□□□□□ -0.15
HOXD11-202ENST00000498438 RPL27AP46776 148 aaKnown RBP14.13□□□□□ -0.15
HOXD11-202ENST00000498438 ALDH3B2P48448 385 aa14.13□□□□□ -0.15
HOXD11-202ENST00000498438 ZNF45Q02386 682 aa14.13□□□□□ -0.15
HOXD11-202ENST00000498438 MZT2AQ6P582 158 aa14.13□□□□□ -0.15
HOXD11-202ENST00000498438 LYSMD2Q8IV50 215 aa14.13□□□□□ -0.15
HOXD11-202ENST00000498438 TTC9CQ8N5M4 171 aa14.13□□□□□ -0.15
HOXD11-202ENST00000498438 AP3S1Q92572 193 aa14.13□□□□□ -0.15
HOXD11-202ENST00000498438 BORCS5Q969J3 196 aa14.13□□□□□ -0.15
HOXD11-202ENST00000498438 FXYD6Q9H0Q3 95 aa14.13□□□□□ -0.15
HOXD11-202ENST00000498438 FAM25AB3EWG3 89 aa14.12□□□□□ -0.15
HOXD11-202ENST00000498438 FAM25CB3EWG5 89 aa14.12□□□□□ -0.15
HOXD11-202ENST00000498438 FAM25GB3EWG6 89 aa14.12□□□□□ -0.15
HOXD11-202ENST00000498438 LY86O95711 162 aa14.12□□□□□ -0.15
HOXD11-202ENST00000498438 TRBV12-3P01733 135 aa14.12□□□□□ -0.15
HOXD11-202ENST00000498438 RLN1P04808 185 aa14.12□□□□□ -0.15
HOXD11-202ENST00000498438 IL6RP08887 468 aaPredicted RBP14.12□□□□□ -0.15
HOXD11-202ENST00000498438 ZNF182P17025 639 aaPredicted RBP14.12□□□□□ -0.15
HOXD11-202ENST00000498438 ZP3P21754 424 aa14.12□□□□□ -0.15
HOXD11-202ENST00000498438 MAS1LP35410 378 aa14.12□□□□□ -0.15
HOXD11-202ENST00000498438 TAS2R31P59538 309 aa14.12□□□□□ -0.15
HOXD11-202ENST00000498438 RPL8P62917 257 aaKnown RBP14.12□□□□□ -0.15
HOXD11-202ENST00000498438 RHOGP84095 191 aa14.12□□□□□ -0.15
HOXD11-202ENST00000498438 OR4A47Q6IF82 309 aa14.12□□□□□ -0.15
HOXD11-202ENST00000498438 ZNF343Q6P1L6 599 aa14.12□□□□□ -0.15
HOXD11-202ENST00000498438 GPR141Q7Z602 305 aa14.12□□□□□ -0.15
HOXD11-202ENST00000498438 FYTTD1Q96QD9 318 aaKnown RBP14.12□□□□□ -0.15
HOXD11-202ENST00000498438 B9D2Q9BPU9 175 aa14.12□□□□□ -0.15
HOXD11-202ENST00000498438 AKIP1Q9NQ31 210 aa14.12□□□□□ -0.15
HOXD11-202ENST00000498438 BET1LQ9NYM9 111 aa14.12□□□□□ -0.15
HOXD11-202ENST00000498438 ADAM30Q9UKF2 790 aa14.12□□□□□ -0.15
HOXD11-202ENST00000498438 TRBV9A0A0B4J1U6 114 aa14.11□□□□□ -0.15
HOXD11-202ENST00000498438 A0A1B0GW64 132 aa14.11□□□□□ -0.15
HOXD11-202ENST00000498438 FAM223BA6NKX1 122 aa14.11□□□□□ -0.15
HOXD11-202ENST00000498438 E7EUB6 86 aa14.11□□□□□ -0.15
HOXD11-202ENST00000498438 S1PR2O95136 353 aa14.11□□□□□ -0.15
HOXD11-202ENST00000498438 HPRT1P00492 218 aa14.11□□□□□ -0.15
HOXD11-202ENST00000498438 ZNF735P0CB33 412 aa14.11□□□□□ -0.15
HOXD11-202ENST00000498438 RCVRNP35243 200 aa14.11□□□□□ -0.15
HOXD11-202ENST00000498438 CD69Q07108 199 aa14.11□□□□□ -0.15
HOXD11-202ENST00000498438 C19orf35Q6ZS72 473 aa14.11□□□□□ -0.15
HOXD11-202ENST00000498438 SLC25A42Q86VD7 318 aa14.11□□□□□ -0.15
HOXD11-202ENST00000498438 FAM223AQ8IWN6 122 aa14.11□□□□□ -0.15
HOXD11-202ENST00000498438 OR6F1Q8NGZ6 308 aa14.11□□□□□ -0.15
HOXD11-202ENST00000498438 OR4A5Q8NH83 315 aa14.11□□□□□ -0.15
HOXD11-202ENST00000498438 AIFM2Q9BRQ8 373 aa14.11□□□□□ -0.15
HOXD11-202ENST00000498438 HRASLSQ9HDD0 168 aa14.11□□□□□ -0.15
HOXD11-202ENST00000498438 PEF1Q9UBV8 284 aaKnown RBP14.11□□□□□ -0.15
HOXD11-202ENST00000498438 LSM4Q9Y4Z0 139 aaKnown RBP14.11□□□□□ -0.15
HOXD11-202ENST00000498438 MYOD1P15172 320 aa14.1□□□□□ -0.15
HOXD11-202ENST00000498438 NQO2P16083 231 aa14.1□□□□□ -0.15
HOXD11-202ENST00000498438 HLA-GP17693 338 aa14.1□□□□□ -0.15
HOXD11-202ENST00000498438 EXOSC2Q13868 293 aaKnown RBP14.1□□□□□ -0.15
HOXD11-202ENST00000498438 POU2AF1Q16633 256 aa14.1□□□□□ -0.15
HOXD11-202ENST00000498438 CD300LFQ8TDQ1 290 aa14.1□□□□□ -0.15
HOXD11-202ENST00000498438 OR4C12Q96R67 309 aa14.1□□□□□ -0.15
HOXD11-202ENST00000498438 PLEKHA2Q9HB19 425 aa14.1□□□□□ -0.15
HOXD11-202ENST00000498438 COMMD9Q9P000 198 aa14.1□□□□□ -0.15
HOXD11-202ENST00000498438 ZNF257Q9Y2Q1 563 aa14.1□□□□□ -0.15
HOXD11-202ENST00000498438 DPPA5A6NC42 116 aa14.09□□□□□ -0.15
HOXD11-202ENST00000498438 NPIPB5A8MRT5 1133 aa14.09□□□□□ -0.15
HOXD11-202ENST00000498438 PGLYRP1O75594 196 aaPredicted RBP14.09□□□□□ -0.15
HOXD11-202ENST00000498438 TSPAN5P62079 268 aa14.09□□□□□ -0.15
HOXD11-202ENST00000498438 ATP5G2Q06055 141 aa14.09□□□□□ -0.15
HOXD11-202ENST00000498438 KLF5Q13887 457 aaPredicted RBP14.09□□□□□ -0.15
HOXD11-202ENST00000498438 RNASE12Q5GAN4 147 aaKnown RBP14.09□□□□□ -0.15
HOXD11-202ENST00000498438 HAPLN4Q86UW8 402 aa14.09□□□□□ -0.15
HOXD11-202ENST00000498438 CMTM1Q8IZ96 169 aa14.09□□□□□ -0.15
HOXD11-202ENST00000498438 NECAP1Q8NC96 275 aa14.09□□□□□ -0.15
HOXD11-202ENST00000498438 OR6Q1Q8NGQ2 317 aa14.09□□□□□ -0.15
HOXD11-202ENST00000498438 RSRP1Q9BUV0 290 aa14.09□□□□□ -0.15
HOXD11-202ENST00000498438 ELOVL1Q9BW60 279 aa14.09□□□□□ -0.15
HOXD11-202ENST00000498438 SLC2A9Q9NRM0 540 aa14.09□□□□□ -0.15
HOXD11-202ENST00000498438 TMEM140Q9NV12 185 aa14.09□□□□□ -0.15
HOXD11-202ENST00000498438 TRAV3A0A0B4J244 114 aa14.08□□□□□ -0.16
HOXD11-202ENST00000498438 GPR31O00270 319 aa14.08□□□□□ -0.16
HOXD11-202ENST00000498438 OR2J3O76001 311 aa14.08□□□□□ -0.16
HOXD11-202ENST00000498438 AREGP15514 252 aa14.08□□□□□ -0.16
HOXD11-202ENST00000498438 RPA2P15927 270 aa14.08□□□□□ -0.16
HOXD11-202ENST00000498438 SPNP16150 400 aa14.08□□□□□ -0.16
HOXD11-202ENST00000498438 SYNJ2BPP57105 145 aa14.08□□□□□ -0.16
HOXD11-202ENST00000498438 SPCS2Q15005 226 aa14.08□□□□□ -0.16
HOXD11-202ENST00000498438 C11orf87Q6NUJ2 197 aa14.08□□□□□ -0.16
HOXD11-202ENST00000498438 DMBX1Q8NFW5 382 aa14.08□□□□□ -0.16
HOXD11-202ENST00000498438 EXTL2Q9UBQ6 330 aa14.08□□□□□ -0.16
HOXD11-202ENST00000498438 CGB1A6NKQ9 187 aa14.07□□□□□ -0.16
HOXD11-202ENST00000498438 UPK2O00526 184 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms