RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 C17orf58Q2M2W7 97 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 Q3ZCU0 254 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 LRRC37A5PQ49AS3 106 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 TMEM155Q4W5P6 130 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 PRSS54Q6PEW0 395 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 UQCC3Q6UW78 93 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 LYPD2Q6UXB3 125 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 ACOT7LQ6ZUV0 252 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 LYZL2Q7Z4W2 148 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 PDZD9Q8IXQ8 264 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 SELENOHQ8IZQ5 122 aaKnown RBP4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 OR8B3Q8NGG8 313 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 OR51H1Q8NH63 302 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 RNASE11Q8TAA1 199 aaKnown RBP4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 CD300LFQ8TDQ1 290 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 RRNAD1Q96FB5 475 aaKnown RBP4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 OR10C1Q96KK4 312 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 ZNF714Q96N38 554 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 OR8B2Q96RD0 313 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 TP53RKQ96S44 253 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 HSD17B10Q99714 261 aaKnown RBP4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 MFFQ9GZY8 342 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 OR2D2Q9H210 308 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 CHODLQ9H9P2 273 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 BEX4Q9NWD9 120 aaPredicted RBP4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 RNF150Q9ULK6 438 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 PSG11Q9UQ72 335 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 SONP18583 2426 aaKnown RBP4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 CADP27708 2225 aa4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 RAI1Q7Z5J4 1906 aaPredicted RBP4.33□□□□□ -1.72
HMGXB4-208ENST00000498325 KANTRA0A1W2PQU2 76 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 G3V3Q6 166 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 RAB29O14966 203 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 ARPC5O15511 151 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 ST8SIA3O43173 380 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 CFDP00746 253 aaPredicted RBP4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 SLC25A6P12236 298 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 LYL1P12980 280 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 PVALBP20472 110 aaPredicted RBP4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 OMGP23515 440 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 CDKN1AP38936 164 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 KIR2DS2P43631 304 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 LPAR6P43657 344 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 HOXA1P49639 335 aaPredicted RBP4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 THBS3P49746 956 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 LOXL3P58215 753 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 PROK1P58294 105 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 S100A10P60903 97 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 B2MP61769 119 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 BTN1A1Q13410 526 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 DUX4L9Q6RFH8 374 aaPredicted RBP4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 HEPN1Q6WQI6 88 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 TMUB2Q71RG4 321 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 LINC00518Q8N0U6 118 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 SPAG16Q8N0X2 631 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 SLC35G3Q8N808 338 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 TCTEX1D2Q8WW35 142 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 DCUN1D4Q92564 292 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 LSM10Q969L4 123 aaKnown RBP4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 PHYHIPLQ96FC7 376 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 ABHD14BQ96IU4 210 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 ADTRPQ96IZ2 230 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 LINC00052Q96N35 136 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 S1PR3Q99500 378 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 NEU1Q99519 415 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 ABHD14AQ9BUJ0 271 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 PARP12Q9H0J9 701 aaKnown RBP4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 PLEKHA2Q9HB19 425 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 PATZ1Q9HBE1 687 aaKnown RBP4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 C19orf12Q9NSK7 152 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 RPUSD1Q9UJJ7 312 aaKnown RBP4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 TNFSF18Q9UNG2 199 aa4.32□□□□□ -1.72
HMGXB4-208ENST00000498325 TRAV14DV4A0A0A6YYC5 116 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 PPIAL4CA0A0B4J2A2 164 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 A0A1B0GU03 582 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 A0A1W2PPR1 153 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 MEX3AA1L020 520 aaKnown RBP4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 E5RGE8 158 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 M0R1X1 148 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 WRBO00258 174 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 HPRT1P00492 218 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 RBP4P02753 201 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 LIPFP07098 398 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 PPIAL4GP0DN37 164 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 CXCL2P19875 107 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 IL3RAP26951 378 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 DUTP33316 252 aaKnown RBP4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 NKX2-1P43699 371 aaPredicted RBP4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 PDLIM4P50479 330 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 ARHGDIBP52566 201 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 AKR1C2P52895 323 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 PRRX1P54821 245 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 GNB2P62879 340 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 IL15RAQ13261 267 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 RAB32Q13637 225 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 ZNF345Q14585 488 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 CT45A1Q5HYN5 189 aa4.31□□□□□ -1.72
HMGXB4-208ENST00000498325 AVPI1Q5T686 147 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms