RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 ARHGEF11O15085 1522 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 PRDM15P57071 1507 aaPredicted RBP2.25□□□□□ -2.05
CALD1-224ENST00000498254 SVILO95425 2214 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 NPHP4O75161 1426 aaPredicted RBP2.25□□□□□ -2.05
CALD1-224ENST00000498254 MYOM3Q5VTT5 1437 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 FMN1Q68DA7 1419 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 BAZ2AQ9UIF9 1905 aaKnown RBP2.25□□□□□ -2.05
CALD1-224ENST00000498254 SPAARA0A1B0GVQ0 90 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 CEACAM18A8MTB9 384 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 H3BP45 60 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 J3KT08 172 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 UBFD1O14562 309 aaKnown RBP2.24□□□□□ -2.05
CALD1-224ENST00000498254 FABP7O15540 132 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 ZNF324O75467 553 aaPredicted RBP2.24□□□□□ -2.05
CALD1-224ENST00000498254 WISP3O95389 354 aaPredicted RBP2.24□□□□□ -2.05
CALD1-224ENST00000498254 IGKV1-39P01597 117 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 IGKV1D-39P04432 117 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 CRYBA1P05813 215 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 PFN1P07737 140 aaKnown RBP2.24□□□□□ -2.05
CALD1-224ENST00000498254 TRAPPC2P0DI81 140 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 TRAPPC2BP0DI82 140 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 BRS3P32247 399 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 SLC18A1P54219 525 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 EMP1P54849 157 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 CCL23P55773 120 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 S100A10P60903 97 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 GNG5P63218 68 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 MEF2CQ06413 473 aaPredicted RBP2.24□□□□□ -2.05
CALD1-224ENST00000498254 EBPQ15125 230 aaKnown RBP2.24□□□□□ -2.05
CALD1-224ENST00000498254 HIST3H3Q16695 136 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 C1orf194Q5T5A4 169 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 SPATA31B1PQ5VZV4 182 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 GLYATQ6IB77 296 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 WDR59Q6PJI9 974 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 AGTRAPQ6RW13 159 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 TBPL2Q6SJ96 375 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 H1FOOQ8IZA3 346 aaPredicted RBP2.24□□□□□ -2.05
CALD1-224ENST00000498254 ZNF101Q8IZC7 436 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 ORMDL3Q8N138 153 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 MMGT1Q8N4V1 131 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 SPICQ8N5J4 248 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 OR2T4Q8NH00 348 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 MCFD2Q8NI22 146 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 ASB13Q8WXK3 278 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 CYYR1Q96J86 154 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 PGLYRP3Q96LB9 341 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 DERL3Q96Q80 235 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 OR52B2Q96RD2 323 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 GPER1Q99527 375 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 DOHHQ9BU89 302 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 EBPLQ9BY08 206 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 TMEM126AQ9H061 195 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 RNASE7Q9H1E1 156 aaKnown RBP2.24□□□□□ -2.05
CALD1-224ENST00000498254 FBXL15Q9H469 300 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 POMKQ9H5K3 350 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 RBM22Q9NW64 420 aaKnown RBP eCLIP2.24□□□□□ -2.05
CALD1-224ENST00000498254 RBM12B-AS1Q9P1G2 102 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 TRAPPC2LQ9UL33 140 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 KLF13Q9Y2Y9 288 aaPredicted RBP2.24□□□□□ -2.05
CALD1-224ENST00000498254 ZNF706Q9Y5V0 76 aaPredicted RBP2.24□□□□□ -2.05
CALD1-224ENST00000498254 GRIN2AQ12879 1464 aa2.24□□□□□ -2.05
CALD1-224ENST00000498254 A0A1W2PP64 1363 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 RTL1A6NKG5 1358 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 ABCC12Q96J65 1359 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 KIAA1551Q9HCM1 1747 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 LOXHD1Q8IVV2 1947 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 TCOF1Q13428 1488 aaKnown RBP2.23□□□□□ -2.05
CALD1-224ENST00000498254 FYCO1Q9BQS8 1478 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 TRAV36DV7A0A075B6V5 113 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 A0A087WUU8 490 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 IGHV1-3A0A0C4DH29 117 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 IGKV1-6A0A0C4DH72 117 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 A0A0J9YY10 115 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 FAM236DA0A1B0GTK5 79 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 LOC389332A0A1B0GUA5 103 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 A0A1B0GX78 115 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 BTNL10A8MVZ5 291 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 E7EQ34 232 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 COPEO14579 308 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 CRXO43186 299 aaPredicted RBP2.23□□□□□ -2.05
CALD1-224ENST00000498254 IFNA7P01567 189 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 OPN1SWP03999 348 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 MAS1P04201 325 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 GYPCP04921 128 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 IL4P05112 153 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 SERPINE1P05121 402 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 CISD3P0C7P0 127 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 FAM236CP0DP71 79 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 ZNF708P17019 499 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 CXCL3P19876 107 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 NTF3P20783 257 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 RPS3P23396 243 aaKnown RBP eCLIP2.23□□□□□ -2.05
CALD1-224ENST00000498254 CMPK1P30085 196 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 RPA3P35244 121 aaPredicted RBP2.23□□□□□ -2.05
CALD1-224ENST00000498254 OR1E2P47887 323 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 DEFA3P59666 94 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 ZNF181Q2M3W8 571 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 ACOT6Q3I5F7 207 aaPredicted RBP2.23□□□□□ -2.05
CALD1-224ENST00000498254 FBXL19-AS1Q494R0 122 aa2.23□□□□□ -2.05
CALD1-224ENST00000498254 TMEM69Q5SWH9 247 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms