RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 SLC38A11Q08AI6 406 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 KLRD1Q13241 179 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 DIAPH2-AS1Q14236 149 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 AARDQ4LEZ3 155 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 SAMD5Q5TGI4 173 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 OR8G2PQ6IF36 304 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 CLEC2AQ6UVW9 174 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 PNKDQ8N490 385 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 C11orf42Q8N5U0 333 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 OR4P4Q8NGL7 312 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 CLDND2Q8NHS1 167 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 RNF141Q8WVD5 230 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 ST6GALNAC6Q969X2 333 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 RPEQ96AT9 228 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 OR4C12Q96R67 309 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 TSNAXQ99598 290 aaKnown RBP6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 AIFM2Q9BRQ8 373 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 BARX1Q9HBU1 254 aaPredicted RBP6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 ENY2Q9NPA8 101 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 CACFD1Q9UGQ2 172 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 PRNDQ9UKY0 176 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 TCF19Q9Y242 345 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 FOXA2Q9Y261 457 aaPredicted RBP6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 STRAPQ9Y3F4 350 aaKnown RBP6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 SPTAN1Q13813 2472 aaKnown RBP6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 DOPEY2Q9Y3R5 2298 aa6.56□□□□□ -1.36
PDZRN3-212ENST00000498048 TRAV3A0A0B4J244 114 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 IGHV2-70DA0A0C4DH43 119 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 ZNF705EA8MWA4 302 aaPredicted RBP6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 LEUTXA8MZ59 168 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 TEX46H3BTG2 121 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 IFNA5P01569 189 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 OR8U8P0C7N1 319 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 HOXB4P17483 251 aaPredicted RBP6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 SULT1A2P50226 295 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 ATP5J2P56134 94 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 ARF6P62330 175 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 LCN2P80188 198 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 SRSF1Q07955 248 aaKnown RBP eCLIP6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 VMA21Q3ZAQ7 101 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 TMEM177Q53S58 311 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 TOR2AQ5JU69 321 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 TMEM14EPQ6UXP3 125 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 TMEM182Q6ZP80 229 aaPredicted RBP6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 Q6ZRG5 221 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 VMO1Q7Z5L0 202 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 HAPLN4Q86UW8 402 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 ZNF429Q86V71 674 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 Q8N7P7 452 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 OR5AN1Q8NGI8 311 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 OR4C13Q8NGP0 309 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 OR52E5Q8NH55 327 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 VSTM2AQ8TAG5 236 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 FAM168AQ92567 244 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 FLYWCH2Q96CP2 140 aaKnown RBP6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 MS4A7Q9GZW8 240 aaPredicted RBP6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 SH3BGRL3Q9H299 93 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 ARV1Q9H2C2 271 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 PLEKHA3Q9HB20 300 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 TMEM14BQ9NUH8 114 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 MED9Q9NWA0 146 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 BET1LQ9NYM9 111 aa6.55□□□□□ -1.36
PDZRN3-212ENST00000498048 IGHV3-72A0A0B4J1Y9 119 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 IGHV1-3A0A0C4DH29 117 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 ANKRD34BA5PLL1 514 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 ODF3BA8MYP8 253 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 BUB1B-PAK6H3BSN5 160 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 I3L521 148 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 NDUFS8O00217 210 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 UPK2O00526 184 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 FGF16O43320 207 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 FOXH1O75593 365 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 SEC11BP0C7V7 166 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 SPP1P10451 314 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 CD33P20138 364 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 USF1P22415 310 aaPredicted RBP6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 ATP6V0CP27449 155 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 MC5RP33032 325 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 CEACAM3P40198 252 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 CAMLGP49069 296 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 RPS16P62249 146 aaKnown RBP6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 RPP30P78346 268 aaKnown RBP6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 RUNX1Q01196 453 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 TNP2Q05952 138 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 AANATQ16613 207 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 PDLIM3Q53GG5 364 aaPredicted RBP6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 MOB3BQ86TA1 216 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 PUSL1Q8N0Z8 303 aaKnown RBP6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 PINX1Q96BK5 328 aaKnown RBP6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 RBMXL1Q96E39 390 aaKnown RBP6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 GNPNAT1Q96EK6 184 aaPredicted RBP6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 PERPQ96FX8 193 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 TMEM147Q9BVK8 224 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 HINT2Q9BX68 163 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 HIPK2Q9H2X6 1198 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 HEYLQ9NQ87 328 aaPredicted RBP6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 OR51B2Q9Y5P1 312 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 KPTNQ9Y664 436 aa6.54□□□□□ -1.36
PDZRN3-212ENST00000498048 A0A1W2PPI3 338 aa6.53□□□□□ -1.36
PDZRN3-212ENST00000498048 C15orf62A8K5M9 175 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms