RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 A0A1W2PRM7 423 aa11.4□□□□□ -0.58
VPS26A-209ENST00000497564 K7EPK0 472 aa11.4□□□□□ -0.58
VPS26A-209ENST00000497564 TIMM23O14925 209 aa11.4□□□□□ -0.58
VPS26A-209ENST00000497564 SHOXO15266 292 aa11.4□□□□□ -0.58
VPS26A-209ENST00000497564 SRD5A1P18405 259 aa11.4□□□□□ -0.58
VPS26A-209ENST00000497564 NKX2-1P43699 371 aaPredicted RBP11.4□□□□□ -0.58
VPS26A-209ENST00000497564 LGALS7P47929 136 aa11.4□□□□□ -0.58
VPS26A-209ENST00000497564 GPR157Q5UAW9 335 aa11.4□□□□□ -0.58
VPS26A-209ENST00000497564 OR4A47Q6IF82 309 aa11.4□□□□□ -0.58
VPS26A-209ENST00000497564 FOXRED2Q8IWF2 684 aa11.4□□□□□ -0.58
VPS26A-209ENST00000497564 PUSL1Q8N0Z8 303 aaKnown RBP11.4□□□□□ -0.58
VPS26A-209ENST00000497564 FAM71E2Q8N5Q1 922 aa11.4□□□□□ -0.58
VPS26A-209ENST00000497564 OR1S1Q8NH92 325 aa11.4□□□□□ -0.58
VPS26A-209ENST00000497564 THAP6Q8TBB0 222 aa11.4□□□□□ -0.58
VPS26A-209ENST00000497564 HARBI1Q96MB7 349 aa11.4□□□□□ -0.58
VPS26A-209ENST00000497564 RNF126Q9BV68 326 aa11.4□□□□□ -0.58
VPS26A-209ENST00000497564 MS4A7Q9GZW8 240 aaPredicted RBP11.4□□□□□ -0.58
VPS26A-209ENST00000497564 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.4□□□□□ -0.58
VPS26A-209ENST00000497564 TMEM140Q9NV12 185 aa11.4□□□□□ -0.58
VPS26A-209ENST00000497564 CACFD1Q9UGQ2 172 aa11.4□□□□□ -0.58
VPS26A-209ENST00000497564 HILPDAQ9Y5L2 63 aa11.4□□□□□ -0.58
VPS26A-209ENST00000497564 TRAV40A0A0B4J280 105 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 SRRM4A7MD48 611 aaKnown RBP11.39□□□□□ -0.59
VPS26A-209ENST00000497564 H0YIZ8 118 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 DEDDO75618 318 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 VENTXO95231 258 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 AVPP01185 164 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 IGLV2-23P01705 113 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 FGF2P09038 288 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 OR9G9P0C7N8 305 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 BPIFB3P59826 476 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 RELBQ01201 579 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 EBI3Q14213 229 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 SSX2Q16385 188 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 IZUMO4Q1ZYL8 232 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 LRRC37A5PQ49AS3 106 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 ZNF429Q86V71 674 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 DYNAPQ8N1N2 210 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 C11orf1Q9H5F2 150 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 MBD2Q9UBB5 411 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 HSPB7Q9UBY9 170 aa11.39□□□□□ -0.59
VPS26A-209ENST00000497564 PLXNB1O43157 2135 aa11.38□□□□□ -0.59
VPS26A-209ENST00000497564 C15orf61A6NNL5 157 aa11.38□□□□□ -0.59
VPS26A-209ENST00000497564 RLN2P04090 185 aa11.38□□□□□ -0.59
VPS26A-209ENST00000497564 NKX2-5P52952 324 aaPredicted RBP11.38□□□□□ -0.59
VPS26A-209ENST00000497564 S100A10P60903 97 aa11.38□□□□□ -0.59
VPS26A-209ENST00000497564 UBE2KP61086 200 aa11.38□□□□□ -0.59
VPS26A-209ENST00000497564 RPS16P62249 146 aaKnown RBP11.38□□□□□ -0.59
VPS26A-209ENST00000497564 PDLIM3Q53GG5 364 aaPredicted RBP11.38□□□□□ -0.59
VPS26A-209ENST00000497564 CXorf66Q5JRM2 361 aaPredicted RBP11.38□□□□□ -0.59
VPS26A-209ENST00000497564 KLF17Q5JT82 389 aaPredicted RBP11.38□□□□□ -0.59
VPS26A-209ENST00000497564 SSX9Q7RTT3 188 aa11.38□□□□□ -0.59
VPS26A-209ENST00000497564 VKORC1L1Q8N0U8 176 aa11.38□□□□□ -0.59
VPS26A-209ENST00000497564 OR52E5Q8NH55 327 aa11.38□□□□□ -0.59
VPS26A-209ENST00000497564 OR4A5Q8NH83 315 aa11.38□□□□□ -0.59
VPS26A-209ENST00000497564 VSTM2AQ8TAG5 236 aa11.38□□□□□ -0.59
VPS26A-209ENST00000497564 TSNAXQ99598 290 aaKnown RBP11.38□□□□□ -0.59
VPS26A-209ENST00000497564 TNFSF18Q9UNG2 199 aa11.38□□□□□ -0.59
VPS26A-209ENST00000497564 RCL1Q9Y2P8 373 aaKnown RBP11.38□□□□□ -0.59
VPS26A-209ENST00000497564 FXYD6-FXYD2A0A087WZ82 144 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 IGHV3-72A0A0B4J1Y9 119 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 E5RGE8 158 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 UPK2O00526 184 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 KBTBD11O94819 623 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 SPDEFO95238 335 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 SCGB1D2O95969 90 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 FSHBP01225 129 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 SAA1P0DJI8 122 aaPredicted RBP11.37□□□□□ -0.59
VPS26A-209ENST00000497564 IGHV4-38-2P0DP08 117 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 HNF1AP20823 631 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 DYNLT3P51808 116 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 TNFRSF9Q07011 255 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 VMA21Q3ZAQ7 101 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 LAMTOR1Q6IAA8 161 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 ZNF546Q86UE3 836 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 THNSL2Q86YJ6 484 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 C9orf62Q8N4C0 152 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 TEX45Q8NA69 505 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 OR4A16Q8NH70 328 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 TMEM167AQ8TBQ9 72 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 C17orf50Q8WW18 174 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 MEGF9Q9H1U4 602 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 TMEM14BQ9NUH8 114 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 OR5AC2Q9NZP5 309 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 FOXA2Q9Y261 457 aaPredicted RBP11.37□□□□□ -0.59
VPS26A-209ENST00000497564 NSG2Q9Y328 171 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 LSM5Q9Y4Y9 91 aaKnown RBP11.37□□□□□ -0.59
VPS26A-209ENST00000497564 ANK2Q01484 3957 aa11.37□□□□□ -0.59
VPS26A-209ENST00000497564 TRAV3A0A0B4J244 114 aa11.36□□□□□ -0.59
VPS26A-209ENST00000497564 MED6O75586 246 aa11.36□□□□□ -0.59
VPS26A-209ENST00000497564 MOSP00540 346 aa11.36□□□□□ -0.59
VPS26A-209ENST00000497564 CRYGBP07316 175 aa11.36□□□□□ -0.59
VPS26A-209ENST00000497564 PVALBP20472 110 aaPredicted RBP11.36□□□□□ -0.59
VPS26A-209ENST00000497564 BRS3P32247 399 aa11.36□□□□□ -0.59
VPS26A-209ENST00000497564 POLR2GP62487 172 aaKnown RBP eCLIP11.36□□□□□ -0.59
VPS26A-209ENST00000497564 ZNF345Q14585 488 aa11.36□□□□□ -0.59
VPS26A-209ENST00000497564 RUSC1-AS1Q66K80 236 aa11.36□□□□□ -0.59
VPS26A-209ENST00000497564 Q8N6K4 173 aa11.36□□□□□ -0.59
VPS26A-209ENST00000497564 OR2T10Q8NGZ9 312 aa11.36□□□□□ -0.59
VPS26A-209ENST00000497564 GRPEL2Q8TAA5 225 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms