RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 CCL28Q9NRJ3 127 aa10.87□□□□□ -0.67
VTI1A-209ENST00000496445 OR2J3O76001 311 aa10.86□□□□□ -0.67
VTI1A-209ENST00000496445 ACTL6BO94805 426 aa10.86□□□□□ -0.67
VTI1A-209ENST00000496445 PPYP01298 95 aa10.86□□□□□ -0.67
VTI1A-209ENST00000496445 FCER2P06734 321 aa10.86□□□□□ -0.67
VTI1A-209ENST00000496445 IL6RP08887 468 aaPredicted RBP10.86□□□□□ -0.67
VTI1A-209ENST00000496445 IGHV4-30-4P0DP06 118 aa10.86□□□□□ -0.67
VTI1A-209ENST00000496445 MSMO1Q15800 293 aa10.86□□□□□ -0.67
VTI1A-209ENST00000496445 RPEL1Q2QD12 228 aa10.86□□□□□ -0.67
VTI1A-209ENST00000496445 VSTM2AQ8TAG5 236 aa10.86□□□□□ -0.67
VTI1A-209ENST00000496445 TMEM167AQ8TBQ9 72 aa10.86□□□□□ -0.67
VTI1A-209ENST00000496445 DMRT1Q9Y5R6 373 aa10.86□□□□□ -0.67
VTI1A-209ENST00000496445 PLECQ15149 4684 aaKnown RBP10.86□□□□□ -0.67
VTI1A-209ENST00000496445 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.85□□□□□ -0.67
VTI1A-209ENST00000496445 MEIS3P1A6NDR6 274 aa10.85□□□□□ -0.67
VTI1A-209ENST00000496445 MYOD1P15172 320 aa10.85□□□□□ -0.67
VTI1A-209ENST00000496445 ATP5G2Q06055 141 aa10.85□□□□□ -0.67
VTI1A-209ENST00000496445 SSX9Q7RTT3 188 aa10.85□□□□□ -0.67
VTI1A-209ENST00000496445 YIPF6Q96EC8 236 aa10.85□□□□□ -0.67
VTI1A-209ENST00000496445 C19orf73Q9NVV2 129 aa10.85□□□□□ -0.67
VTI1A-209ENST00000496445 SIGLEC8Q9NYZ4 499 aa10.85□□□□□ -0.67
VTI1A-209ENST00000496445 ZNF257Q9Y2Q1 563 aa10.85□□□□□ -0.67
VTI1A-209ENST00000496445 IZUMO1RA6ND01 250 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 CGB1A6NKQ9 187 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 NPIPB5A8MRT5 1133 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 A8MZ25 164 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 TMEM127O75204 238 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 ZNF735P0CB33 412 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 AREGP15514 252 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 RPL27AP46776 148 aaKnown RBP10.84□□□□□ -0.67
VTI1A-209ENST00000496445 FXYD4P59646 89 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 C15orf32Q32M92 178 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 TIMM50Q3ZCQ8 353 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 OR4A47Q6IF82 309 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 ADAMTSL5Q6ZMM2 481 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 ZNF818PQ6ZRF7 136 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 NECAP1Q8NC96 275 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 FANCD2OSQ96PS1 177 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 FYTTD1Q96QD9 318 aaKnown RBP10.84□□□□□ -0.67
VTI1A-209ENST00000496445 TM2D3Q9BRN9 247 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 DIABLOQ9NR28 239 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 ANAPC10Q9UM13 185 aa10.84□□□□□ -0.67
VTI1A-209ENST00000496445 PPP5D1E7EU14 171 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 SULT1C2O00338 296 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 XRCC3O43542 346 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 AIREO43918 545 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 EDN2P20800 178 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 MAS1LP35410 378 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 RPS19P39019 145 aaKnown RBP10.83□□□□□ -0.68
VTI1A-209ENST00000496445 KIR2DS2P43631 304 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 CBX5P45973 191 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 MECP2P51608 486 aaKnown RBP10.83□□□□□ -0.68
VTI1A-209ENST00000496445 LSM3P62310 102 aaKnown RBP10.83□□□□□ -0.68
VTI1A-209ENST00000496445 UBE2NLQ5JXB2 153 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 SLC25A42Q86VD7 318 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 TMEM17Q86X19 198 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 SGPP2Q8IWX5 399 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 SPAG16Q8N0X2 631 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 ZBTB34Q8NCN2 500 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 OR5AP2Q8NGF4 316 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 SLC5A7Q9GZV3 580 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 SLC2A9Q9NRM0 540 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 BET1LQ9NYM9 111 aa10.83□□□□□ -0.68
VTI1A-209ENST00000496445 H0Y980 276 aa10.82□□□□□ -0.68
VTI1A-209ENST00000496445 C3orf84H3BNL1 204 aa10.82□□□□□ -0.68
VTI1A-209ENST00000496445 RBFOX2O43251 390 aaKnown RBP eCLIP10.82□□□□□ -0.68
VTI1A-209ENST00000496445 NDUFB8O95169 186 aa10.82□□□□□ -0.68
VTI1A-209ENST00000496445 HRASP01112 189 aa10.82□□□□□ -0.68
VTI1A-209ENST00000496445 HLA-AP01891 365 aaKnown RBP10.82□□□□□ -0.68
VTI1A-209ENST00000496445 CRYGCP07315 174 aa10.82□□□□□ -0.68
VTI1A-209ENST00000496445 CTRB1P17538 263 aa10.82□□□□□ -0.68
VTI1A-209ENST00000496445 RPL8P62917 257 aaKnown RBP10.82□□□□□ -0.68
VTI1A-209ENST00000496445 TATDN3Q17R31 274 aa10.82□□□□□ -0.68
VTI1A-209ENST00000496445 KLK9Q2XQG4 91 aa10.82□□□□□ -0.68
VTI1A-209ENST00000496445 CTRB2Q6GPI1 263 aa10.82□□□□□ -0.68
VTI1A-209ENST00000496445 CROCCP3Q8IVE0 287 aa10.82□□□□□ -0.68
VTI1A-209ENST00000496445 Q8N402 240 aa10.82□□□□□ -0.68
VTI1A-209ENST00000496445 GIMAP1Q8WWP7 306 aa10.82□□□□□ -0.68
VTI1A-209ENST00000496445 CCDC140Q96MF4 163 aa10.82□□□□□ -0.68
VTI1A-209ENST00000496445 PEMTQ9UBM1 199 aa10.82□□□□□ -0.68
VTI1A-209ENST00000496445 FBXL7Q9UJT9 491 aa10.82□□□□□ -0.68
VTI1A-209ENST00000496445 KLK9Q9UKQ9 250 aa10.82□□□□□ -0.68
VTI1A-209ENST00000496445 TRAV3A0A0B4J244 114 aa10.81□□□□□ -0.68
VTI1A-209ENST00000496445 IGHV3-23P01764 117 aa10.81□□□□□ -0.68
VTI1A-209ENST00000496445 REG1AP05451 166 aa10.81□□□□□ -0.68
VTI1A-209ENST00000496445 HLA-GP17693 338 aa10.81□□□□□ -0.68
VTI1A-209ENST00000496445 PSMB6P28072 239 aa10.81□□□□□ -0.68
VTI1A-209ENST00000496445 TAS2R31P59538 309 aa10.81□□□□□ -0.68
VTI1A-209ENST00000496445 TAS2R20P59543 309 aa10.81□□□□□ -0.68
VTI1A-209ENST00000496445 POU2AF1Q16633 256 aa10.81□□□□□ -0.68
VTI1A-209ENST00000496445 LCN12Q6JVE5 192 aa10.81□□□□□ -0.68
VTI1A-209ENST00000496445 SAMD12Q8N8I0 201 aa10.81□□□□□ -0.68
VTI1A-209ENST00000496445 TSPAN14Q8NG11 270 aa10.81□□□□□ -0.68
VTI1A-209ENST00000496445 OR4A5Q8NH83 315 aa10.81□□□□□ -0.68
VTI1A-209ENST00000496445 MUC7Q8TAX7 377 aa10.81□□□□□ -0.68
VTI1A-209ENST00000496445 ZMAT4Q9H898 229 aa10.81□□□□□ -0.68
VTI1A-209ENST00000496445 IFT46Q9NQC8 304 aa10.81□□□□□ -0.68
VTI1A-209ENST00000496445 EHFQ9NZC4 300 aa10.81□□□□□ -0.68
VTI1A-209ENST00000496445 S4R3C0 116 aa10.81□□□□□ -0.68
VTI1A-209ENST00000496445 HYDINQ4G0P3 5121 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms