RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 TMEM200BQ69YZ2 307 aa13.3□□□□□ -0.28
CBX4-204ENST00000495122 ZNF833PQ6ZTB9 187 aa13.3□□□□□ -0.28
CBX4-204ENST00000495122 TNFRSF14Q92956 283 aa13.3□□□□□ -0.28
CBX4-204ENST00000495122 PINX1Q96BK5 328 aaKnown RBP13.3□□□□□ -0.28
CBX4-204ENST00000495122 C19orf12Q9NSK7 152 aa13.3□□□□□ -0.28
CBX4-204ENST00000495122 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.29□□□□□ -0.286e-14■□□□□ 10.9
CBX4-204ENST00000495122 SLC31A2O15432 143 aa13.29□□□□□ -0.28
CBX4-204ENST00000495122 SOX15O60248 233 aa13.29□□□□□ -0.28
CBX4-204ENST00000495122 CST7O76096 145 aa13.29□□□□□ -0.28
CBX4-204ENST00000495122 IGHV2-70P01814 119 aa13.29□□□□□ -0.28
CBX4-204ENST00000495122 ATP6V0CP27449 155 aa13.29□□□□□ -0.28
CBX4-204ENST00000495122 CAMLGP49069 296 aa13.29□□□□□ -0.28
CBX4-204ENST00000495122 ZNF137PP52743 207 aa13.29□□□□□ -0.28
CBX4-204ENST00000495122 ZNF273Q14593 569 aa13.29□□□□□ -0.28
CBX4-204ENST00000495122 Q6ZRG5 221 aa13.29□□□□□ -0.28
CBX4-204ENST00000495122 LYG1Q8N1E2 194 aa13.29□□□□□ -0.28
CBX4-204ENST00000495122 HSD17B11Q8NBQ5 300 aa13.29□□□□□ -0.28
CBX4-204ENST00000495122 OR4A16Q8NH70 328 aa13.29□□□□□ -0.28
CBX4-204ENST00000495122 DTD1Q8TEA8 209 aa13.29□□□□□ -0.28
CBX4-204ENST00000495122 TIMD4Q96H15 378 aa13.29□□□□□ -0.28
CBX4-204ENST00000495122 MIOXQ9UGB7 285 aa13.29□□□□□ -0.28
CBX4-204ENST00000495122 CUBNO60494 3623 aa13.28□□□□□ -0.28
CBX4-204ENST00000495122 PPIHO43447 177 aaKnown RBP13.28□□□□□ -0.28
CBX4-204ENST00000495122 IAPPP10997 89 aa13.28□□□□□ -0.28
CBX4-204ENST00000495122 IL3RAP26951 378 aa13.28□□□□□ -0.28
CBX4-204ENST00000495122 DLX6P56179 175 aa13.28□□□□□ -0.28
CBX4-204ENST00000495122 IZUMO4Q1ZYL8 232 aa13.28□□□□□ -0.28
CBX4-204ENST00000495122 ZNF525Q8N782 197 aa13.28□□□□□ -0.28
CBX4-204ENST00000495122 OR2G3Q8NGZ4 309 aa13.28□□□□□ -0.28
CBX4-204ENST00000495122 C8orf46Q8TAG6 207 aa13.28□□□□□ -0.28
CBX4-204ENST00000495122 SCGB1C1Q8TD33 95 aa13.28□□□□□ -0.28
CBX4-204ENST00000495122 H1FXQ92522 213 aaKnown RBP13.28□□□□□ -0.28
CBX4-204ENST00000495122 TMEM186Q96B77 213 aa13.28□□□□□ -0.28
CBX4-204ENST00000495122 LINC00052Q96N35 136 aa13.28□□□□□ -0.28
CBX4-204ENST00000495122 SMDT1Q9H4I9 107 aa13.28□□□□□ -0.28
CBX4-204ENST00000495122 CTSZQ9UBR2 303 aa13.28□□□□□ -0.28
CBX4-204ENST00000495122 TIMM9Q9Y5J7 89 aa13.28□□□□□ -0.28
CBX4-204ENST00000495122 MXRA5Q9NR99 2828 aa13.27□□□□□ -0.28
CBX4-204ENST00000495122 A0A096LNT2 108 aa13.27□□□□□ -0.29
CBX4-204ENST00000495122 A0A1B0GW64 132 aa13.27□□□□□ -0.29
CBX4-204ENST00000495122 RBMXL2O75526 392 aaKnown RBP13.27□□□□□ -0.29
CBX4-204ENST00000495122 TSPAN15O95858 294 aa13.27□□□□□ -0.29
CBX4-204ENST00000495122 APOA2P02652 100 aa13.27□□□□□ -0.29
CBX4-204ENST00000495122 PRH1P02810 166 aa13.27□□□□□ -0.29
CBX4-204ENST00000495122 M6PRP20645 277 aa13.27□□□□□ -0.29
CBX4-204ENST00000495122 ATP5IP56385 69 aaPredicted RBP13.27□□□□□ -0.29
CBX4-204ENST00000495122 SERF2P84101 59 aa13.27□□□□□ -0.29
CBX4-204ENST00000495122 SLC25A24Q6NUK1 477 aa13.27□□□□□ -0.29
CBX4-204ENST00000495122 LYPD2Q6UXB3 125 aa13.27□□□□□ -0.29
CBX4-204ENST00000495122 LILRB2Q8N423 598 aa13.27□□□□□ -0.29
CBX4-204ENST00000495122 TMEM217Q8N7C4 229 aa13.27□□□□□ -0.29
CBX4-204ENST00000495122 OSR1Q8TAX0 266 aaPredicted RBP13.27□□□□□ -0.29
CBX4-204ENST00000495122 RAB1CQ92928 201 aa13.27□□□□□ -0.29
CBX4-204ENST00000495122 PCGF1Q9BSM1 259 aa13.27□□□□□ -0.29
CBX4-204ENST00000495122 FOXA2Q9Y261 457 aaPredicted RBP13.27□□□□□ -0.29
CBX4-204ENST00000495122 IGHV4-30-2A0A087WSY4 118 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 MEX3AA1L020 520 aaKnown RBP13.26□□□□□ -0.29
CBX4-204ENST00000495122 CEBPZOSA8MTT3 80 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 CRLF1O75462 422 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 NXPH3O95157 252 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 FBN1P35555 2871 aaKnown RBP13.26□□□□□ -0.29
CBX4-204ENST00000495122 RAB2AP61019 212 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 GNB2P62879 340 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 RELBQ01201 579 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 SLC38A11Q08AI6 406 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 TMEM267Q0VDI3 215 aaPredicted RBP13.26□□□□□ -0.29
CBX4-204ENST00000495122 LRRC75BQ2VPJ9 315 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 SPANXN5Q5MJ07 72 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 OR9G1Q8NH87 305 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 TMEM147Q9BVK8 224 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 GGACTQ9BVM4 153 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 HRH4Q9H3N8 390 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 TMEM140Q9NV12 185 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 FKBP11Q9NYL4 201 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 PRNDQ9UKY0 176 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 ZNF257Q9Y2Q1 563 aa13.26□□□□□ -0.29
CBX4-204ENST00000495122 hCG_1809904A0A1W2PP81 198 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 A0A1W2PPE2 198 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 A0A1W2PR64 198 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 A0A1W2PRV1 198 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 TMEM218A2RU14 115 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 C15orf61A6NNL5 157 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 H3BP45 60 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 J3QR06 171 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 CD5LO43866 347 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 FCN3O75636 299 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 HBE1P02100 147 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 ARG1P05089 322 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 OR9G9P0C7N8 305 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 METTL15P1P0C7V9 234 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 GNG10P50151 68 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 DVL1P1P54792 670 aaPredicted RBP13.25□□□□□ -0.29
CBX4-204ENST00000495122 VWC2Q2TAL6 325 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 AKR1C8PQ5T2L2 129 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 ZNF383Q8NA42 475 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 BPIFCQ8NFQ6 507 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 OR10P1Q8NGE3 313 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 OR8B3Q8NGG8 313 aa13.25□□□□□ -0.29
CBX4-204ENST00000495122 NEIL1Q96FI4 390 aaPredicted RBP13.25□□□□□ -0.29
CBX4-204ENST00000495122 RHOVQ96L33 236 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms