RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 UCP1P25874 307 aa17.13■□□□□ 0.33
RNF40-203ENST00000493683 GOLT1AQ6ZVE7 132 aa17.13■□□□□ 0.33
RNF40-203ENST00000493683 WDYHV1Q96HA8 205 aa17.13■□□□□ 0.33
RNF40-203ENST00000493683 MRPL13Q9BYD1 178 aaKnown RBP17.13■□□□□ 0.33
RNF40-203ENST00000493683 RGPD4Q7Z3J3 1758 aa17.13■□□□□ 0.33
RNF40-203ENST00000493683 TCF23Q7RTU1 214 aa17.13■□□□□ 0.33
RNF40-203ENST00000493683 CBLN4Q9NTU7 201 aa17.13■□□□□ 0.33
RNF40-203ENST00000493683 LOC105371242A0A075B767 164 aa17.13■□□□□ 0.33
RNF40-203ENST00000493683 NPIPB7O75200 414 aa17.13■□□□□ 0.33
RNF40-203ENST00000493683 ATP5LO75964 103 aa17.12■□□□□ 0.33
RNF40-203ENST00000493683 B9A039 149 aa17.12■□□□□ 0.33
RNF40-203ENST00000493683 SNRPCP09234 159 aaKnown RBP17.12■□□□□ 0.33
RNF40-203ENST00000493683 EGR4Q05215 589 aa17.12■□□□□ 0.33
RNF40-203ENST00000493683 MBNL2Q5VZF2 373 aaKnown RBP17.12■□□□□ 0.33
RNF40-203ENST00000493683 FOXD3Q9UJU5 478 aaPredicted RBP17.12■□□□□ 0.33
RNF40-203ENST00000493683 STARD6P59095 220 aa17.12■□□□□ 0.33
RNF40-203ENST00000493683 ARF6P62330 175 aa17.12■□□□□ 0.33
RNF40-203ENST00000493683 RPRMQ9NS64 109 aa17.12■□□□□ 0.33
RNF40-203ENST00000493683 ZNF831Q5JPB2 1677 aa17.12■□□□□ 0.33
RNF40-203ENST00000493683 Q5BKY6 102 aa17.12■□□□□ 0.33
RNF40-203ENST00000493683 IFI27L2Q9H2X8 130 aa17.12■□□□□ 0.33
RNF40-203ENST00000493683 TRBV20OR9-2A0A075B6H5 130 aa17.11■□□□□ 0.33
RNF40-203ENST00000493683 A8MXK9 166 aa17.11■□□□□ 0.33
RNF40-203ENST00000493683 SIGLEC5O15389 551 aa17.11■□□□□ 0.33
RNF40-203ENST00000493683 MEF2CQ06413 473 aaPredicted RBP17.11■□□□□ 0.33
RNF40-203ENST00000493683 MEIG1Q5JSS6 88 aa17.11■□□□□ 0.33
RNF40-203ENST00000493683 LINC00305Q7Z4B0 112 aa17.11■□□□□ 0.33
RNF40-203ENST00000493683 FADS6Q8N9I5 356 aa17.11■□□□□ 0.33
RNF40-203ENST00000493683 EAF1Q96JC9 268 aaPredicted RBP17.11■□□□□ 0.33
RNF40-203ENST00000493683 C19orf48Q6RUI8 117 aa17.11■□□□□ 0.33
RNF40-203ENST00000493683 Q6ZT83 130 aa17.11■□□□□ 0.33
RNF40-203ENST00000493683 FAM159AQ6UWV7 190 aa17.11■□□□□ 0.33
RNF40-203ENST00000493683 SPTA1P02549 2419 aa17.11■□□□□ 0.33
RNF40-203ENST00000493683 WFIKKN1Q96NZ8 548 aa17.11■□□□□ 0.33
RNF40-203ENST00000493683 PILRBQ9UKJ0 227 aa17.11■□□□□ 0.33
RNF40-203ENST00000493683 IGHV1-69-2A0A0G2JMI3 117 aa17.11■□□□□ 0.33
RNF40-203ENST00000493683 FAM90A1Q86YD7 464 aa17.11■□□□□ 0.33
RNF40-203ENST00000493683 KIAA1644Q3SXP7 199 aa17.1■□□□□ 0.33
RNF40-203ENST00000493683 LRTM2Q8N967 370 aa17.1■□□□□ 0.33
RNF40-203ENST00000493683 FMC1Q96HJ9 113 aa17.1■□□□□ 0.33
RNF40-203ENST00000493683 TUBA4BQ9H853 241 aa17.1■□□□□ 0.33
RNF40-203ENST00000493683 SPAG17Q6Q759 2223 aa17.1■□□□□ 0.33
RNF40-203ENST00000493683 ALKBH7Q9BT30 221 aaPredicted RBP17.1■□□□□ 0.33
RNF40-203ENST00000493683 MIA3Q5JRA6 1907 aa17.1■□□□□ 0.33
RNF40-203ENST00000493683 GRIFINA4D1Z8 144 aa17.1■□□□□ 0.33
RNF40-203ENST00000493683 DNAL4O96015 105 aa17.1■□□□□ 0.33
RNF40-203ENST00000493683 FAM131CQ96AQ9 280 aa17.1■□□□□ 0.33
RNF40-203ENST00000493683 SDHCQ99643 169 aaPredicted RBP17.1■□□□□ 0.33
RNF40-203ENST00000493683 VCX2Q9H322 139 aa17.1■□□□□ 0.33
RNF40-203ENST00000493683 CGB1A6NKQ9 187 aa17.1■□□□□ 0.33
RNF40-203ENST00000493683 TTC9CQ8N5M4 171 aa17.1■□□□□ 0.33
RNF40-203ENST00000493683 C1orf162Q8NEQ5 155 aaPredicted RBP17.1■□□□□ 0.33
RNF40-203ENST00000493683 FOXH1O75593 365 aa17.09■□□□□ 0.33
RNF40-203ENST00000493683 FHITP49789 147 aa17.09■□□□□ 0.33
RNF40-203ENST00000493683 ZNF56Q15929 161 aa17.09■□□□□ 0.33
RNF40-203ENST00000493683 CACNG8Q8WXS5 425 aa17.09■□□□□ 0.33
RNF40-203ENST00000493683 ICE1Q9Y2F5 2266 aa17.09■□□□□ 0.33
RNF40-203ENST00000493683 SRP19P09132 144 aaKnown RBP17.09■□□□□ 0.33
RNF40-203ENST00000493683 GLRXP35754 106 aa17.09■□□□□ 0.33
RNF40-203ENST00000493683 ZP1P60852 638 aa17.09■□□□□ 0.33
RNF40-203ENST00000493683 MESP2Q0VG99 397 aa17.09■□□□□ 0.33
RNF40-203ENST00000493683 TBR1Q16650 682 aa17.09■□□□□ 0.33
RNF40-203ENST00000493683 BIVMQ86UB2 503 aa17.09■□□□□ 0.33
RNF40-203ENST00000493683 RTN4RL2Q86UN3 420 aa17.09■□□□□ 0.33
RNF40-203ENST00000493683 PRELID3AQ96N28 172 aa17.09■□□□□ 0.33
RNF40-203ENST00000493683 NKX2-8O15522 239 aa17.08■□□□□ 0.33
RNF40-203ENST00000493683 FOXL2P58012 376 aa17.08■□□□□ 0.33
RNF40-203ENST00000493683 SPSB2Q99619 263 aa17.08■□□□□ 0.33
RNF40-203ENST00000493683 ACP7Q6ZNF0 438 aa17.08■□□□□ 0.33
RNF40-203ENST00000493683 C9orf172C9J069 976 aa17.08■□□□□ 0.32
RNF40-203ENST00000493683 NBEAP1P0C6P0 100 aa17.08■□□□□ 0.32
RNF40-203ENST00000493683 CBLN1P23435 193 aa17.08■□□□□ 0.32
RNF40-203ENST00000493683 TIMM23BQ5SRD1 257 aa17.08■□□□□ 0.32
RNF40-203ENST00000493683 SAMD13Q5VXD3 122 aa17.08■□□□□ 0.32
RNF40-203ENST00000493683 F11RQ9Y624 299 aaKnown RBP17.08■□□□□ 0.32
RNF40-203ENST00000493683 RRHO14718 337 aa17.07■□□□□ 0.32
RNF40-203ENST00000493683 NPFFO15130 113 aa17.07■□□□□ 0.32
RNF40-203ENST00000493683 THY1P04216 161 aa17.07■□□□□ 0.32
RNF40-203ENST00000493683 OTX1P32242 354 aaPredicted RBP17.07■□□□□ 0.32
RNF40-203ENST00000493683 RNASEH2CQ8TDP1 164 aaKnown RBP17.07■□□□□ 0.32
RNF40-203ENST00000493683 PDLIM4P50479 330 aa17.07■□□□□ 0.32
RNF40-203ENST00000493683 EMP1P54849 157 aa17.07■□□□□ 0.32
RNF40-203ENST00000493683 SEC16AO15027 2179 aa17.07■□□□□ 0.32
RNF40-203ENST00000493683 COL24A1Q17RW2 1714 aa17.07■□□□□ 0.32
RNF40-203ENST00000493683 A0A0G2JK05 382 aa17.07■□□□□ 0.32
RNF40-203ENST00000493683 DUX5Q96PT3 197 aa17.07■□□□□ 0.32
RNF40-203ENST00000493683 CIARTQ8N365 385 aaPredicted RBP17.07■□□□□ 0.32
RNF40-203ENST00000493683 GPHA2Q96T91 129 aa17.07■□□□□ 0.32
RNF40-203ENST00000493683 RP1P56715 2156 aa17.07■□□□□ 0.32
RNF40-203ENST00000493683 C1QTNF9BB2RNN3 333 aa17.06■□□□□ 0.32
RNF40-203ENST00000493683 PEX7O00628 323 aa17.06■□□□□ 0.32
RNF40-203ENST00000493683 A0A1B0GUT8 65 aa17.06■□□□□ 0.32
RNF40-203ENST00000493683 RTN4RQ9BZR6 473 aa17.06■□□□□ 0.32
RNF40-203ENST00000493683 KCNS1Q96KK3 526 aa17.06■□□□□ 0.32
RNF40-203ENST00000493683 KIAA1217Q5T5P2 1943 aa17.06■□□□□ 0.32
RNF40-203ENST00000493683 FAM181BA6NEQ2 426 aa17.06■□□□□ 0.32
RNF40-203ENST00000493683 ASIPP42127 132 aa17.06■□□□□ 0.32
RNF40-203ENST00000493683 CDCP2Q5VXM1 449 aa17.06■□□□□ 0.32
RNF40-203ENST00000493683 COLQQ9Y215 455 aaPredicted RBP17.06■□□□□ 0.32
RNF40-203ENST00000493683 SCN4AP35499 1836 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms