RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 ACTL6BO94805 426 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 KBTBD11O94819 623 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 OR2A4O95047 310 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 IGF1P05019 195 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 IL7P13232 177 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 RPA2P15927 270 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 NQO2P16083 231 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 TAS2R31P59538 309 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 FXYD3Q14802 87 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 PRSS8Q16651 343 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 BEAN1Q3B7T3 259 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 OR4A47Q6IF82 309 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 LINC00299Q6ZSB3 139 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 REC114Q7Z4M0 266 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 MMD2Q8IY49 270 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 DMBX1Q8NFW5 382 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 DEDD2Q8WXF8 326 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 OR2A7Q96R45 310 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 CITED2Q99967 270 aaPredicted RBP9.1□□□□□ -0.95
CTSA-209ENST00000493522 AIFM2Q9BRQ8 373 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 ZNF430Q9H8G1 570 aaPredicted RBP9.1□□□□□ -0.95
CTSA-209ENST00000493522 PLEKHA2Q9HB19 425 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 ZNF580Q9UK33 172 aa9.1□□□□□ -0.95
CTSA-209ENST00000493522 A0A1W2PRX2 142 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 TCRBV4S1A1TA0A5B7 111 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 G3V318 75 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 G3V4G9 280 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 H0Y980 276 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 ARPC1BO15143 372 aaKnown RBP9.09□□□□□ -0.95
CTSA-209ENST00000493522 MPPED1O15442 326 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 OPN1MWP04001 364 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 OPN1MW2P0DN77 364 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 OPN1MW3P0DN78 364 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 NSUN5P1Q3KNT7 163 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 UNQ5815/PRO19632Q6UWF5 114 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 ZNF562Q6V9R5 426 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 PUSL1Q8N0Z8 303 aaKnown RBP9.09□□□□□ -0.95
CTSA-209ENST00000493522 TMEM167AQ8TBQ9 72 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 SCGB3A2Q96PL1 93 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 PHB2Q99623 299 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 C5orf66Q9H5L9 145 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 TMEM140Q9NV12 185 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 VSIG4Q9Y279 399 aa9.09□□□□□ -0.95
CTSA-209ENST00000493522 NBEAL2Q6ZNJ1 2754 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 TEX13DA0A0J9YY54 714 aaPredicted RBP9.08□□□□□ -0.96
CTSA-209ENST00000493522 C3orf85A0A1B0GTC6 90 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 A0A1W2PN81 502 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 NAP1L6A6NFF2 107 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 MARCH11A6NNE9 402 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 KRASP01116 189 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 SERPINE2P07093 398 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 G6PCP35575 357 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 CHRNA7P36544 502 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 SSBP2P81877 361 aaPredicted RBP9.08□□□□□ -0.96
CTSA-209ENST00000493522 CFHR3Q02985 330 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 TMEM267Q0VDI3 215 aaPredicted RBP9.08□□□□□ -0.96
CTSA-209ENST00000493522 ZNF846Q147U1 533 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 POU2AF1Q16633 256 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 MRGPRG-AS1Q2M3A8 158 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 TRIM16LQ309B1 348 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 ZNF585BQ52M93 769 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 CXorf66Q5JRM2 361 aaPredicted RBP9.08□□□□□ -0.96
CTSA-209ENST00000493522 C10orf55Q5SWW7 151 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 KPRPQ5T749 579 aaPredicted RBP9.08□□□□□ -0.96
CTSA-209ENST00000493522 SAMD5Q5TGI4 173 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 TEX38Q6PEX7 206 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 COMMD1Q8N668 190 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 LFNGQ8NES3 379 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 SRSF12Q8WXF0 261 aaKnown RBP9.08□□□□□ -0.96
CTSA-209ENST00000493522 TP53RKQ96S44 253 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 RTBDNQ9BSG5 229 aaPredicted RBP9.08□□□□□ -0.96
CTSA-209ENST00000493522 CCDC32Q9BV29 185 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 WDR12Q9GZL7 423 aaKnown RBP9.08□□□□□ -0.96
CTSA-209ENST00000493522 NAA60Q9H7X0 242 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 FAM212BQ9NTI7 297 aaPredicted RBP9.08□□□□□ -0.96
CTSA-209ENST00000493522 BET1LQ9NYM9 111 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 GPR132Q9UNW8 380 aa9.08□□□□□ -0.96
CTSA-209ENST00000493522 FOXA2Q9Y261 457 aaPredicted RBP9.08□□□□□ -0.96
CTSA-209ENST00000493522 CENPXA8MT69 81 aa9.07□□□□□ -0.96
CTSA-209ENST00000493522 OR5AC1P0C628 307 aa9.07□□□□□ -0.96
CTSA-209ENST00000493522 APELAP0DMC3 54 aa9.07□□□□□ -0.96
CTSA-209ENST00000493522 PF4V1P10720 104 aa9.07□□□□□ -0.96
CTSA-209ENST00000493522 CCR6P51684 374 aa9.07□□□□□ -0.96
CTSA-209ENST00000493522 AKR1C2P52895 323 aa9.07□□□□□ -0.96
CTSA-209ENST00000493522 CRIP2P52943 208 aaPredicted RBP9.07□□□□□ -0.96
CTSA-209ENST00000493522 RPL8P62917 257 aaKnown RBP9.07□□□□□ -0.96
CTSA-209ENST00000493522 CD83Q01151 205 aa9.07□□□□□ -0.96
CTSA-209ENST00000493522 FOXE3Q13461 319 aa9.07□□□□□ -0.96
CTSA-209ENST00000493522 SP6Q3SY56 376 aa9.07□□□□□ -0.96
CTSA-209ENST00000493522 TCTEX1D4Q5JR98 221 aa9.07□□□□□ -0.96
CTSA-209ENST00000493522 LCNL1Q6ZST4 164 aa9.07□□□□□ -0.96
CTSA-209ENST00000493522 TMED4Q7Z7H5 227 aa9.07□□□□□ -0.96
CTSA-209ENST00000493522 NDUFA11Q86Y39 141 aa9.07□□□□□ -0.96
CTSA-209ENST00000493522 ADAD2Q8NCV1 583 aaKnown RBP9.07□□□□□ -0.96
CTSA-209ENST00000493522 OR4A5Q8NH83 315 aa9.07□□□□□ -0.96
CTSA-209ENST00000493522 RNASE11Q8TAA1 199 aaKnown RBP9.07□□□□□ -0.96
CTSA-209ENST00000493522 C7orf50Q9BRJ6 194 aaKnown RBP9.07□□□□□ -0.96
CTSA-209ENST00000493522 TSSC4Q9Y5U2 329 aaPredicted RBP9.07□□□□□ -0.96
CTSA-209ENST00000493522 RYR3Q15413 4870 aa9.06□□□□□ -0.96
CTSA-209ENST00000493522 TRAV3A0A0B4J244 114 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms