RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 KBTBD11O94819 623 aa8.77□□□□□ -1.01
COL6A3-213ENST00000493475 FOLR2P14207 255 aa8.77□□□□□ -1.01
COL6A3-213ENST00000493475 ARL3P36405 182 aa8.77□□□□□ -1.01
COL6A3-213ENST00000493475 CDNFQ49AH0 187 aa8.77□□□□□ -1.01
COL6A3-213ENST00000493475 ZNF57Q68EA5 555 aaPredicted RBP8.77□□□□□ -1.01
COL6A3-213ENST00000493475 ADAMTSL5Q6ZMM2 481 aa8.77□□□□□ -1.01
COL6A3-213ENST00000493475 ZNF66Q6ZN08 573 aa8.77□□□□□ -1.01
COL6A3-213ENST00000493475 GPHB5Q86YW7 130 aa8.77□□□□□ -1.01
COL6A3-213ENST00000493475 Q8N3U1 123 aa8.77□□□□□ -1.01
COL6A3-213ENST00000493475 OR52B4Q8NGK2 314 aa8.77□□□□□ -1.01
COL6A3-213ENST00000493475 OR4A5Q8NH83 315 aa8.77□□□□□ -1.01
COL6A3-213ENST00000493475 MARC2Q969Z3 335 aa8.77□□□□□ -1.01
COL6A3-213ENST00000493475 THAP7Q9BT49 309 aaPredicted RBP8.77□□□□□ -1.01
COL6A3-213ENST00000493475 HIPK2Q9H2X6 1198 aa8.77□□□□□ -1.01
COL6A3-213ENST00000493475 SLC2A9Q9NRM0 540 aa8.77□□□□□ -1.01
COL6A3-213ENST00000493475 HUWE1Q7Z6Z7 4374 aaKnown RBP8.76□□□□□ -1.01
COL6A3-213ENST00000493475 TRBV7-1A0A0A6YYK4 115 aa8.76□□□□□ -1.01
COL6A3-213ENST00000493475 C2orf70A6NJV1 201 aa8.76□□□□□ -1.01
COL6A3-213ENST00000493475 NOTOA8MTQ0 251 aa8.76□□□□□ -1.01
COL6A3-213ENST00000493475 J3QRK9 145 aa8.76□□□□□ -1.01
COL6A3-213ENST00000493475 MRPS14O60783 128 aaKnown RBP8.76□□□□□ -1.01
COL6A3-213ENST00000493475 HLA-DQB1P01920 261 aa8.76□□□□□ -1.01
COL6A3-213ENST00000493475 PRH1P02810 166 aa8.76□□□□□ -1.01
COL6A3-213ENST00000493475 MECP2P51608 486 aaKnown RBP8.76□□□□□ -1.01
COL6A3-213ENST00000493475 RPL8P62917 257 aaKnown RBP8.76□□□□□ -1.01
COL6A3-213ENST00000493475 CATR1Q13166 79 aa8.76□□□□□ -1.01
COL6A3-213ENST00000493475 DEFB114Q30KQ6 69 aa8.76□□□□□ -1.01
COL6A3-213ENST00000493475 OR2B11Q5JQS5 317 aa8.76□□□□□ -1.01
COL6A3-213ENST00000493475 RBPMS2Q6ZRY4 209 aaKnown RBP8.76□□□□□ -1.01
COL6A3-213ENST00000493475 TPRA1Q86W33 373 aa8.76□□□□□ -1.01
COL6A3-213ENST00000493475 SLC38A6Q8IZM9 456 aa8.76□□□□□ -1.01
COL6A3-213ENST00000493475 TMEM167AQ8TBQ9 72 aa8.76□□□□□ -1.01
COL6A3-213ENST00000493475 ZC4H2Q9NQZ6 224 aa8.76□□□□□ -1.01
COL6A3-213ENST00000493475 SPATA2Q9UM82 520 aa8.76□□□□□ -1.01
COL6A3-213ENST00000493475 DNAH7Q8WXX0 4024 aa8.76□□□□□ -1.01
COL6A3-213ENST00000493475 IZUMO1RA6ND01 250 aa8.75□□□□□ -1.01
COL6A3-213ENST00000493475 NDUFB8O95169 186 aa8.75□□□□□ -1.01
COL6A3-213ENST00000493475 MYOD1P15172 320 aa8.75□□□□□ -1.01
COL6A3-213ENST00000493475 NFYAP23511 347 aaPredicted RBP8.75□□□□□ -1.01
COL6A3-213ENST00000493475 OR10A3P58181 314 aa8.75□□□□□ -1.01
COL6A3-213ENST00000493475 ZNF45Q02386 682 aa8.75□□□□□ -1.01
COL6A3-213ENST00000493475 MSMO1Q15800 293 aa8.75□□□□□ -1.01
COL6A3-213ENST00000493475 C22orf42Q6IC83 251 aa8.75□□□□□ -1.01
COL6A3-213ENST00000493475 DEFB125Q8N687 156 aa8.75□□□□□ -1.01
COL6A3-213ENST00000493475 ZBTB34Q8NCN2 500 aa8.75□□□□□ -1.01
COL6A3-213ENST00000493475 CD300LFQ8TDQ1 290 aa8.75□□□□□ -1.01
COL6A3-213ENST00000493475 CNBD2Q96M20 576 aa8.75□□□□□ -1.01
COL6A3-213ENST00000493475 GGTLC1Q9BX51 225 aa8.75□□□□□ -1.01
COL6A3-213ENST00000493475 COMMD5Q9GZQ3 224 aa8.75□□□□□ -1.01
COL6A3-213ENST00000493475 HRASLSQ9HDD0 168 aa8.75□□□□□ -1.01
COL6A3-213ENST00000493475 ANXA10Q9UJ72 324 aa8.75□□□□□ -1.01
COL6A3-213ENST00000493475 ADAM30Q9UKF2 790 aa8.75□□□□□ -1.01
COL6A3-213ENST00000493475 UFC1Q9Y3C8 167 aa8.75□□□□□ -1.01
COL6A3-213ENST00000493475 LOC102724200A0A096LPH7 203 aaPredicted RBP8.74□□□□□ -1.01
COL6A3-213ENST00000493475 TRAV25A0A0B4J276 109 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 A8MWP6 167 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 PPP5D1E7EU14 171 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 OR2C1O95371 312 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 CD7P09564 240 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 HLA-GP17693 338 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 CBLN1P23435 193 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 PSMB6P28072 239 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 APOC4P55056 127 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 SCAND1P57086 179 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 C10orf55Q5SWW7 151 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 THOC7Q6I9Y2 204 aaKnown RBP8.74□□□□□ -1.01
COL6A3-213ENST00000493475 CLEC19AQ6UXS0 136 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 LINC00322Q6ZN03 302 aaPredicted RBP8.74□□□□□ -1.01
COL6A3-213ENST00000493475 HSD17B13Q7Z5P4 300 aaPredicted RBP8.74□□□□□ -1.01
COL6A3-213ENST00000493475 MFSD4AQ8N468 514 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 FCGR1BQ92637 280 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 C5orf30Q96GV9 206 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 FAM110AQ9BQ89 295 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 SRSF8Q9BRL6 282 aaKnown RBP8.74□□□□□ -1.01
COL6A3-213ENST00000493475 TAS2R8Q9NYW2 309 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 SSR3Q9UNL2 185 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 RYR2Q92736 4967 aa8.74□□□□□ -1.01
COL6A3-213ENST00000493475 TNCP24821 2201 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 HMX3A6NHT5 357 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 ZNF785A8K8V0 405 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 RBFOX2O43251 390 aaKnown RBP eCLIP8.73□□□□□ -1.01
COL6A3-213ENST00000493475 CRYGCP07315 174 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 ZNF735P0CB33 412 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 ELLP55199 621 aaPredicted RBP8.73□□□□□ -1.01
COL6A3-213ENST00000493475 GABARAPL2P60520 117 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 ERVK-16P61578 105 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 PLA2G7Q13093 441 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 MRGPRG-AS1Q2M3A8 158 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 LAMTOR1Q6IAA8 161 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 PLET1Q6UQ28 207 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 VKORC1L1Q8N0U8 176 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 TMEM217Q8N7C4 229 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 OR1L6Q8NGR2 347 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 WDR89Q96FK6 387 aaPredicted RBP8.73□□□□□ -1.01
COL6A3-213ENST00000493475 C6orf62Q9GZU0 229 aaPredicted RBP8.73□□□□□ -1.01
COL6A3-213ENST00000493475 Q9H521 79 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 RETNQ9HD89 108 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 BET1LQ9NYM9 111 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 DAPK2Q9UIK4 370 aa8.73□□□□□ -1.01
COL6A3-213ENST00000493475 DYNC2H1Q8NCM8 4307 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms