RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 MINDY2Q8NBR6 621 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 BPIFB6Q8NFQ5 453 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 OR5AU1Q8NGC0 362 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 OR52M1Q8NGK5 317 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 OR8J1Q8NGP2 316 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 OR4A16Q8NH70 328 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 RPS4Y2Q8TD47 263 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 NEK7Q8TDX7 302 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 ASB17Q8WXJ9 295 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 DNAJC9Q8WXX5 260 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 TMEM203Q969S6 136 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 TMEM106AQ96A25 262 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 C12orf43Q96C57 262 aaKnown RBP2.14□□□□□ -2.07
PTCD3-218ENST00000493430 NRBF2Q96F24 287 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 ABHD14BQ96IU4 210 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 ZNF184Q99676 751 aaPredicted RBP2.14□□□□□ -2.07
PTCD3-218ENST00000493430 SULT4A1Q9BR01 284 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 ALKBH7Q9BT30 221 aaPredicted RBP2.14□□□□□ -2.07
PTCD3-218ENST00000493430 TMED9Q9BVK6 235 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 MRPL20Q9BYC9 149 aaKnown RBP2.14□□□□□ -2.07
PTCD3-218ENST00000493430 PKIBQ9C010 78 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 SLC22A4Q9H015 551 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 RGCCQ9H4X1 137 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 TMEM231Q9H6L2 316 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 METTL8Q9H825 291 aaKnown RBP2.14□□□□□ -2.07
PTCD3-218ENST00000493430 RAB9BQ9NP90 201 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 SMPD3Q9NY59 655 aaPredicted RBP2.14□□□□□ -2.07
PTCD3-218ENST00000493430 CALYQ9NYX4 217 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 NDUFA13Q9P0J0 144 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 HHLA2Q9UM44 414 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 SPATA2Q9UM82 520 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 SLC7A11Q9UPY5 501 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 PSG11Q9UQ72 335 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 MRPS7Q9Y2R9 242 aaKnown RBP2.14□□□□□ -2.07
PTCD3-218ENST00000493430 WSB1Q9Y6I7 421 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 S4R3C0 116 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 NBEAL2Q6ZNJ1 2754 aa2.14□□□□□ -2.07
PTCD3-218ENST00000493430 DYNC2H1Q8NCM8 4307 aaKnown RBP2.13□□□□□ -2.07
PTCD3-218ENST00000493430 IGKV1-6A0A0C4DH72 117 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 A0A0U1RRA0 63 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 BTBD17A6NE02 478 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 LY6LH3BQJ8 138 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 BUB1B-PAK6H3BSN5 160 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 SDCBPO00560 298 aaPredicted RBP2.13□□□□□ -2.07
PTCD3-218ENST00000493430 HSD17B6O14756 317 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 DEGS1O15121 323 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 MAGEB3O15480 346 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 SOCS1O15524 211 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 SOX15O60248 233 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 NOS1APO75052 506 aaPredicted RBP2.13□□□□□ -2.07
PTCD3-218ENST00000493430 CLN5O75503 358 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 CRTAPO75718 401 aaPredicted RBP2.13□□□□□ -2.07
PTCD3-218ENST00000493430 GATBO75879 557 aaKnown RBP2.13□□□□□ -2.07
PTCD3-218ENST00000493430 OR7C1O76099 320 aaPredicted RBP2.13□□□□□ -2.07
PTCD3-218ENST00000493430 ECDO95905 644 aaPredicted RBP2.13□□□□□ -2.07
PTCD3-218ENST00000493430 TRBV12-3P01733 135 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 IGHV3-11P01762 117 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 HBZP02008 142 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 APOC1P02654 83 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 OCM2P0CE71 109 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 OCMP0CE72 109 aaPredicted RBP2.13□□□□□ -2.07
PTCD3-218ENST00000493430 CGB3P0DN86 165 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 CGB7P0DN87 165 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 IGFBP3P17936 291 aaPredicted RBP2.13□□□□□ -2.07
PTCD3-218ENST00000493430 CELP19835 753 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 TUBG1P23258 451 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 HTR1DP28221 377 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 BLVRBP30043 206 aaPredicted RBP2.13□□□□□ -2.07
PTCD3-218ENST00000493430 DUTP33316 252 aaKnown RBP2.13□□□□□ -2.07
PTCD3-218ENST00000493430 PTGFRP43088 359 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 RBM11P57052 281 aaKnown RBP2.13□□□□□ -2.07
PTCD3-218ENST00000493430 ST3GAL4Q11206 333 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 RSU1Q15404 277 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 KCNJ8Q15842 424 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 ECSCRQ19T08 205 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 MAJINQ3KP22 176 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 TMEM41BQ5BJD5 291 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 RBM48Q5RL73 367 aaKnown RBP2.13□□□□□ -2.07
PTCD3-218ENST00000493430 MUC21Q5SSG8 566 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 C10orf55Q5SWW7 151 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 LIPKQ5VXJ0 399 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 GLIPR1L1Q6UWM5 242 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 FAM131AQ6UXB0 335 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 MOB3BQ86TA1 216 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 FTMTQ8N4E7 242 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 TMEM86BQ8N661 226 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 C5orf56Q8N8D9 126 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 ZNF439Q8NDP4 499 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 OR11H6Q8NGC7 330 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 OR51T1Q8NGJ9 327 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 OR5AK2Q8NH90 309 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 SGMS2Q8NHU3 365 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 MRPL30Q8TCC3 161 aaKnown RBP2.13□□□□□ -2.07
PTCD3-218ENST00000493430 FCGR1BQ92637 280 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 GHSRQ92847 366 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 ARL11Q969Q4 196 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 DERL3Q96Q80 235 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 CLCC1Q96S66 551 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 FAAP24Q9BTP7 215 aa2.13□□□□□ -2.07
PTCD3-218ENST00000493430 SELENOIQ9C0D9 397 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms