RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 DRAXINQ8NBI3 349 aaPredicted RBP5.29□□□□□ -1.56
VPS52-219ENST00000493379 OR5H2Q8NGV7 314 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 OR6F1Q8NGZ6 308 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 TERB2Q8NHR7 220 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 OSR1Q8TAX0 266 aaPredicted RBP5.29□□□□□ -1.56
VPS52-219ENST00000493379 FLYWCH2Q96CP2 140 aaKnown RBP5.29□□□□□ -1.56
VPS52-219ENST00000493379 C6orf62Q9GZU0 229 aaPredicted RBP5.29□□□□□ -1.56
VPS52-219ENST00000493379 BATF3Q9NR55 127 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 SLC2A8Q9NY64 477 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 NUBP2Q9Y5Y2 271 aa5.29□□□□□ -1.56
VPS52-219ENST00000493379 HECTD4Q9Y4D8 3996 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 IGHV7-81A0A0B4J1V7 117 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 CCDC160A6NGH7 325 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 LINC01548A6NM66 108 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 DIRC3C9JPN6 131 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 G3V4G9 280 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 M0R1X1 148 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 PGLYRP1O75594 196 aaPredicted RBP5.28□□□□□ -1.56
VPS52-219ENST00000493379 PMP2P02689 132 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 CSF1P09603 554 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 EGR2P11161 476 aaPredicted RBP5.28□□□□□ -1.56
VPS52-219ENST00000493379 CNTFRP26992 372 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 HLA-DMAP28067 261 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 PPIFP30405 207 aaKnown RBP5.28□□□□□ -1.56
VPS52-219ENST00000493379 UBE2KP61086 200 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 RND3P61587 244 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 RPL30P62888 115 aaKnown RBP5.28□□□□□ -1.56
VPS52-219ENST00000493379 SSBP2P81877 361 aaPredicted RBP5.28□□□□□ -1.56
VPS52-219ENST00000493379 HES1Q14469 280 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 HNF4GQ14541 408 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 PSG5Q15238 335 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 SURF2Q15527 256 aaPredicted RBP5.28□□□□□ -1.56
VPS52-219ENST00000493379 KLK9Q2XQG4 91 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 BEAN1Q3B7T3 259 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 GLDNQ6ZMI3 551 aaPredicted RBP5.28□□□□□ -1.56
VPS52-219ENST00000493379 ZNF818PQ6ZRF7 136 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 Q6ZRM9 215 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 PUSL1Q8N0Z8 303 aaKnown RBP5.28□□□□□ -1.56
VPS52-219ENST00000493379 COMMD1Q8N668 190 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 MINDY2Q8NBR6 621 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 MYOZ3Q8TDC0 251 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 CD300LFQ8TDQ1 290 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 CHPT1Q8WUD6 406 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 MRGPRFQ96AM1 343 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 ZNF486Q96H40 463 aaPredicted RBP5.28□□□□□ -1.56
VPS52-219ENST00000493379 TSNAXQ99598 290 aaKnown RBP5.28□□□□□ -1.56
VPS52-219ENST00000493379 SDHCQ99643 169 aaPredicted RBP5.28□□□□□ -1.56
VPS52-219ENST00000493379 RASL11BQ9BPW5 248 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 ZNF2Q9BSG1 426 aaPredicted RBP5.28□□□□□ -1.56
VPS52-219ENST00000493379 THAP7Q9BT49 309 aaPredicted RBP5.28□□□□□ -1.56
VPS52-219ENST00000493379 DCUN1D5Q9BTE7 237 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 SRRQ9GZT4 340 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 CCL28Q9NRJ3 127 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 SLC35D1Q9NTN3 355 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 EHFQ9NZC4 300 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 KLK9Q9UKQ9 250 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 SIGLEC9Q9Y336 463 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 PRELID3BQ9Y3B1 194 aa5.28□□□□□ -1.56
VPS52-219ENST00000493379 RBM7Q9Y580 266 aaKnown RBP5.28□□□□□ -1.56
VPS52-219ENST00000493379 NCBP2LA6PVI3 153 aaKnown RBP5.27□□□□□ -1.57
VPS52-219ENST00000493379 AP4M1O00189 453 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 GPR31O00270 319 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 FCN1O00602 326 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 IGHG4P01861 327 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 APOA2P02652 100 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 FCER2P06734 321 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 S100A5P33763 92 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 KIR2DS2P43631 304 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 CX3CL1P78423 397 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 ZNF45Q02386 682 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 IL18Q14116 193 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 KIAA0141Q14154 515 aaPredicted RBP5.27□□□□□ -1.57
VPS52-219ENST00000493379 MEF2DQ14814 521 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 MMDQ15546 238 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 ZNF585BQ52M93 769 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 AKIRIN2Q53H80 203 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 RNASE10Q5GAN6 216 aaKnown RBP5.27□□□□□ -1.57
VPS52-219ENST00000493379 TCTEX1D4Q5JR98 221 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 STEAP1BQ6NZ63 245 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 Q6ZSN1 163 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 SLC35E3Q7Z769 313 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 PPP1R27Q86WC6 154 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 TMEM17Q86X19 198 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 STPG2Q8N412 459 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 GDPD1Q8N9F7 314 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 OR4D10Q8NGI6 311 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 TMEM68Q96MH6 324 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 HSPB9Q9BQS6 159 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 AIFM2Q9BRQ8 373 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 GON7Q9BXV9 100 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 SLC5A7Q9GZV3 580 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 OR51J1Q9H342 316 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 PLEKHA2Q9HB19 425 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 GPR132Q9UNW8 380 aa5.27□□□□□ -1.57
VPS52-219ENST00000493379 HERC1Q15751 4861 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 LCE6AA0A183 80 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 H7C2Y5 167 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 B3GALNT1O75752 331 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 RAB3DO95716 219 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 HPRT1P00492 218 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms