RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 LAMA4Q16363 1823 aa0.22□□□□□ -2.37
SYCP1-208ENST00000493377 TONSLQ96HA7 1378 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 RALGAPA2Q2PPJ7 1873 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 TMED7-TICAM2A0A0A6YYA0 188 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 TRAV38-1A0A0B4J264 116 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 IL6P05231 212 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 KRT7P08729 469 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 RNASE3P12724 160 aaKnown RBP0.21□□□□□ -2.38
SYCP1-208ENST00000493377 CXCL2P19875 107 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 CXCL3P19876 107 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 CD40LGP29965 261 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 RPL28P46779 137 aaKnown RBP0.21□□□□□ -2.38
SYCP1-208ENST00000493377 AQP4P55087 323 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 CXCR4P61073 352 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 POLR2GP62487 172 aaKnown RBP eCLIP0.21□□□□□ -2.38
SYCP1-208ENST00000493377 C10orf55Q5SWW7 151 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 SDHAF4Q5VUM1 108 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 SBSNQ6UWP8 590 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.21□□□□□ -2.38
SYCP1-208ENST00000493377 KRTAP19-3Q7Z4W3 81 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 GID4Q8IVV7 300 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 CD302Q8IX05 232 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 TMEM86AQ8N2M4 240 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 C15orf53Q8NAA6 179 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 OR7G1Q8NGA0 311 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 HAVCR2Q8TDQ0 301 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 GNPNAT1Q96EK6 184 aaPredicted RBP0.21□□□□□ -2.38
SYCP1-208ENST00000493377 TMA16Q96EY4 203 aaKnown RBP0.21□□□□□ -2.38
SYCP1-208ENST00000493377 ANKRD36BP1Q96IX9 119 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 NMNAT3Q96T66 252 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 NSRP1Q9H0G5 558 aaKnown RBP0.21□□□□□ -2.38
SYCP1-208ENST00000493377 MS4A6AQ9H2W1 248 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 WDR54Q9H977 334 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 TREM1Q9NP99 234 aa0.21□□□□□ -2.38
SYCP1-208ENST00000493377 ZNHIT6Q9NWK9 470 aaKnown RBP0.21□□□□□ -2.38
SYCP1-208ENST00000493377 RSL24D1Q9UHA3 163 aaKnown RBP0.21□□□□□ -2.38
SYCP1-208ENST00000493377 FLT4P35916 1363 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 EIF4G1Q04637 1599 aaKnown RBP0.2□□□□□ -2.38
SYCP1-208ENST00000493377 EML5Q05BV3 1969 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 TRBV10-2A0A0K0K1G8 114 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 TINCRA0A1B0GVN0 87 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 HSBP1L1C9JCN9 74 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 H3BT86 120 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 COX7A2LO14548 114 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 NPPAP01160 153 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 HLA-DRAP01903 254 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 C1QAP02745 245 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 GRPRP30550 384 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 SLCO1A2P46721 670 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 PMS2P3Q13401 168 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 JOSD1Q15040 202 aaPredicted RBP0.2□□□□□ -2.38
SYCP1-208ENST00000493377 DNAL1Q4LDG9 190 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 C9orf64Q5T6V5 341 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 FAM173BQ6P4H8 233 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 RASSF6Q6ZTQ3 369 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 DHFR2Q86XF0 187 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 BOD1L2Q8IYS8 172 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 UMODL1-AS1Q8N2C9 162 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 SLC22A24Q8N4F4 322 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 PACRGLQ8N7B6 248 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 SGMS2Q8NHU3 365 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 RAB2BQ8WUD1 216 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 C12orf43Q96C57 262 aaKnown RBP0.2□□□□□ -2.38
SYCP1-208ENST00000493377 SMIM19Q96E16 107 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 ZNF514Q96K75 400 aaPredicted RBP0.2□□□□□ -2.38
SYCP1-208ENST00000493377 TMEM109Q9BVC6 243 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 TIPINQ9BVW5 301 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 AK3Q9UIJ7 227 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 PRELID1Q9Y255 219 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 C22orf24Q9Y442 160 aa0.2□□□□□ -2.38
SYCP1-208ENST00000493377 KIF15Q9NS87 1388 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 SYNRGQ9UMZ2 1314 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 CCDC88AQ3V6T2 1871 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 LOC110117498A0A087WWA1 95 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 TRAPPC2LH3BP13 241 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 SMLR1H3BR10 107 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 ORC5O43913 435 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 HPGDSO60760 199 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 ADAP1O75689 374 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 NSA2O95478 260 aaKnown RBP0.19□□□□□ -2.38
SYCP1-208ENST00000493377 TFPTP0C1Z6 253 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 FGF6P10767 208 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 PSMB6P28072 239 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 FXYD2P54710 66 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 CLDN12P56749 244 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 TNFAIP6P98066 277 aaPredicted RBP0.19□□□□□ -2.38
SYCP1-208ENST00000493377 EMX1Q04741 257 aaPredicted RBP0.19□□□□□ -2.38
SYCP1-208ENST00000493377 SURF2Q15527 256 aaPredicted RBP0.19□□□□□ -2.38
SYCP1-208ENST00000493377 TNFAIP8L3Q5GJ75 292 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 FAM27BQ5VT28 67 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 FAM78BQ5VT40 261 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 FAM19A2Q8N3H0 131 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 Q8N402 240 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 UBL4BQ8N7F7 174 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 C12orf29Q8N999 325 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 OR8B3Q8NGG8 313 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 DHRS9Q9BPW9 319 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 BBS2Q9BXC9 721 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 HRASLSQ9HDD0 168 aa0.19□□□□□ -2.38
SYCP1-208ENST00000493377 CD300AQ9UGN4 299 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms