RNA–Protein interactions for RNA: ENST00000492806.5

CCDC13-208, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 1,267 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-208ENST00000492806 R3HDM4Q96D70 268 aa13.16□□□□□ -0.3
CCDC13-208ENST00000492806 TMEM68Q96MH6 324 aa13.16□□□□□ -0.3
CCDC13-208ENST00000492806 SLC25A21Q9BQT8 299 aaPredicted RBP13.16□□□□□ -0.3
CCDC13-208ENST00000492806 LINC00527Q9UJ94 153 aa13.16□□□□□ -0.3
CCDC13-208ENST00000492806 CENPXA8MT69 81 aa13.15□□□□□ -0.3
CCDC13-208ENST00000492806 M0QZ24 198 aa13.15□□□□□ -0.3
CCDC13-208ENST00000492806 KBTBD11O94819 623 aa13.15□□□□□ -0.3
CCDC13-208ENST00000492806 IGHG4P01861 327 aa13.15□□□□□ -0.3
CCDC13-208ENST00000492806 ELANEP08246 267 aa13.15□□□□□ -0.3
CCDC13-208ENST00000492806 CD28P10747 220 aa13.15□□□□□ -0.3
CCDC13-208ENST00000492806 PPIFP30405 207 aaKnown RBP13.15□□□□□ -0.3
CCDC13-208ENST00000492806 CFHR3Q02985 330 aa13.15□□□□□ -0.3
CCDC13-208ENST00000492806 FOXE3Q13461 319 aa13.15□□□□□ -0.3
CCDC13-208ENST00000492806 OR4A47Q6IF82 309 aa13.15□□□□□ -0.3
CCDC13-208ENST00000492806 NDUFA11Q86Y39 141 aa13.15□□□□□ -0.3
CCDC13-208ENST00000492806 VKORC1L1Q8N0U8 176 aa13.15□□□□□ -0.3
CCDC13-208ENST00000492806 RTBDNQ9BSG5 229 aaPredicted RBP13.15□□□□□ -0.3
CCDC13-208ENST00000492806 WDR12Q9GZL7 423 aaKnown RBP13.15□□□□□ -0.3
CCDC13-208ENST00000492806 C5orf66Q9H5L9 145 aa13.15□□□□□ -0.3
CCDC13-208ENST00000492806 ZNF430Q9H8G1 570 aaPredicted RBP13.15□□□□□ -0.3
CCDC13-208ENST00000492806 C3orf85A0A1B0GTC6 90 aa13.14□□□□□ -0.31
CCDC13-208ENST00000492806 ARPC1BO15143 372 aaKnown RBP13.14□□□□□ -0.31
CCDC13-208ENST00000492806 ATG12O94817 140 aa13.14□□□□□ -0.31
CCDC13-208ENST00000492806 SERPINE2P07093 398 aa13.14□□□□□ -0.31
CCDC13-208ENST00000492806 EGR2P11161 476 aaPredicted RBP13.14□□□□□ -0.31
CCDC13-208ENST00000492806 GNB1P62873 340 aa13.14□□□□□ -0.31
CCDC13-208ENST00000492806 PJVKQ0ZLH3 352 aa13.14□□□□□ -0.31
CCDC13-208ENST00000492806 TNXAQ16473 311 aa13.14□□□□□ -0.31
CCDC13-208ENST00000492806 MRGPRG-AS1Q2M3A8 158 aa13.14□□□□□ -0.31
CCDC13-208ENST00000492806 C19orf54Q5BKX5 351 aa13.14□□□□□ -0.31
CCDC13-208ENST00000492806 SSX9Q7RTT3 188 aa13.14□□□□□ -0.31
CCDC13-208ENST00000492806 ZNF329Q86UD4 541 aa13.14□□□□□ -0.31
CCDC13-208ENST00000492806 RNF152Q8N8N0 203 aa13.14□□□□□ -0.31
CCDC13-208ENST00000492806 MINDY2Q8NBR6 621 aa13.14□□□□□ -0.31
CCDC13-208ENST00000492806 DMBX1Q8NFW5 382 aa13.14□□□□□ -0.31
CCDC13-208ENST00000492806 ZFP57Q9NU63 452 aa13.14□□□□□ -0.31
CCDC13-208ENST00000492806 FBXO7Q9Y3I1 522 aa13.14□□□□□ -0.31
CCDC13-208ENST00000492806 TSSC4Q9Y5U2 329 aaPredicted RBP13.14□□□□□ -0.31
CCDC13-208ENST00000492806 TCRBV4S1A1TA0A5B7 111 aa13.13□□□□□ -0.31
CCDC13-208ENST00000492806 MARCH11A6NNE9 402 aa13.13□□□□□ -0.31
CCDC13-208ENST00000492806 IL6RP08887 468 aaPredicted RBP13.13□□□□□ -0.31
CCDC13-208ENST00000492806 RPL8P62917 257 aaKnown RBP13.13□□□□□ -0.31
CCDC13-208ENST00000492806 SSBP2P81877 361 aaPredicted RBP13.13□□□□□ -0.31
CCDC13-208ENST00000492806 ZNF846Q147U1 533 aa13.13□□□□□ -0.31
CCDC13-208ENST00000492806 C2orf68Q2NKX9 166 aa13.13□□□□□ -0.31
CCDC13-208ENST00000492806 CXorf66Q5JRM2 361 aaPredicted RBP13.13□□□□□ -0.31
CCDC13-208ENST00000492806 C11orf44Q8N8P7 122 aa13.13□□□□□ -0.31
CCDC13-208ENST00000492806 GRPEL2Q8TAA5 225 aa13.13□□□□□ -0.31
CCDC13-208ENST00000492806 SPIN2AQ99865 258 aa13.13□□□□□ -0.31
CCDC13-208ENST00000492806 CITED2Q99967 270 aaPredicted RBP13.13□□□□□ -0.31
CCDC13-208ENST00000492806 SPIN2BQ9BPZ2 258 aa13.13□□□□□ -0.31
CCDC13-208ENST00000492806 TMEM140Q9NV12 185 aa13.13□□□□□ -0.31
CCDC13-208ENST00000492806 FOXA2Q9Y261 457 aaPredicted RBP13.13□□□□□ -0.31
CCDC13-208ENST00000492806 KCNIP3Q9Y2W7 256 aa13.13□□□□□ -0.31
CCDC13-208ENST00000492806 WSB1Q9Y6I7 421 aa13.13□□□□□ -0.31
CCDC13-208ENST00000492806 WNK1Q9H4A3 2382 aa13.12□□□□□ -0.31
CCDC13-208ENST00000492806 TEX13DA0A0J9YY54 714 aaPredicted RBP13.12□□□□□ -0.31
CCDC13-208ENST00000492806 CRYM-AS1A6NIL9 109 aa13.12□□□□□ -0.31
CCDC13-208ENST00000492806 UPK2O00526 184 aa13.12□□□□□ -0.31
CCDC13-208ENST00000492806 UCP1P25874 307 aa13.12□□□□□ -0.31
CCDC13-208ENST00000492806 DHODHQ02127 395 aa13.12□□□□□ -0.31
CCDC13-208ENST00000492806 RBMS2Q15434 407 aaKnown RBP13.12□□□□□ -0.31
CCDC13-208ENST00000492806 ECSCRQ19T08 205 aa13.12□□□□□ -0.31
CCDC13-208ENST00000492806 TCTEX1D4Q5JR98 221 aa13.12□□□□□ -0.31
CCDC13-208ENST00000492806 UNQ5815/PRO19632Q6UWF5 114 aa13.12□□□□□ -0.31
CCDC13-208ENST00000492806 C10orf99Q6UWK7 81 aa13.12□□□□□ -0.31
CCDC13-208ENST00000492806 SGPP2Q8IWX5 399 aa13.12□□□□□ -0.31
CCDC13-208ENST00000492806 LFNGQ8NES3 379 aa13.12□□□□□ -0.31
CCDC13-208ENST00000492806 OR5M8Q8NGP6 311 aa13.12□□□□□ -0.31
CCDC13-208ENST00000492806 SRSF12Q8WXF0 261 aaKnown RBP13.12□□□□□ -0.31
CCDC13-208ENST00000492806 TP53RKQ96S44 253 aa13.12□□□□□ -0.31
CCDC13-208ENST00000492806 TSC22D3Q99576 134 aa13.12□□□□□ -0.31
CCDC13-208ENST00000492806 NAA60Q9H7X0 242 aa13.12□□□□□ -0.31
CCDC13-208ENST00000492806 VSIG4Q9Y279 399 aa13.12□□□□□ -0.31
CCDC13-208ENST00000492806 G3V318 75 aa13.11□□□□□ -0.31
CCDC13-208ENST00000492806 SNAPC5O75971 98 aa13.11□□□□□ -0.31
CCDC13-208ENST00000492806 KRASP01116 189 aa13.11□□□□□ -0.31
CCDC13-208ENST00000492806 IGLV1-40P01703 118 aa13.11□□□□□ -0.31
CCDC13-208ENST00000492806 HLA-GP17693 338 aa13.11□□□□□ -0.31
CCDC13-208ENST00000492806 PSMB8P28062 276 aa13.11□□□□□ -0.31
CCDC13-208ENST00000492806 SLC6A1P30531 599 aa13.11□□□□□ -0.31
CCDC13-208ENST00000492806 RPL27AP46776 148 aaKnown RBP13.11□□□□□ -0.31
CCDC13-208ENST00000492806 GALNT14Q96FL9 552 aa13.11□□□□□ -0.31
CCDC13-208ENST00000492806 SEC22AQ96IW7 307 aa13.11□□□□□ -0.31
CCDC13-208ENST00000492806 FAM103A1Q9BTL3 118 aaKnown RBP13.11□□□□□ -0.31
CCDC13-208ENST00000492806 PIGBOS1A0A0B4J2F0 54 aa13.1□□□□□ -0.31
CCDC13-208ENST00000492806 A0A1W2PN81 502 aa13.1□□□□□ -0.31
CCDC13-208ENST00000492806 MSGN1A6NI15 193 aa13.1□□□□□ -0.31
CCDC13-208ENST00000492806 H3BUA1 57 aa13.1□□□□□ -0.31
CCDC13-208ENST00000492806 G6PCP35575 357 aa13.1□□□□□ -0.31
CCDC13-208ENST00000492806 CHRNA7P36544 502 aa13.1□□□□□ -0.31
CCDC13-208ENST00000492806 TRIM16LQ309B1 348 aa13.1□□□□□ -0.31
CCDC13-208ENST00000492806 THOC7Q6I9Y2 204 aaKnown RBP13.1□□□□□ -0.31
CCDC13-208ENST00000492806 TMEM65Q6PI78 240 aa13.1□□□□□ -0.31
CCDC13-208ENST00000492806 PHB2Q99623 299 aa13.1□□□□□ -0.31
CCDC13-208ENST00000492806 TMEM222Q9H0R3 208 aa13.1□□□□□ -0.31
CCDC13-208ENST00000492806 FKBP11Q9NYL4 201 aa13.1□□□□□ -0.31
CCDC13-208ENST00000492806 ADARB2-AS1A8MUL3 147 aa13.09□□□□□ -0.31
CCDC13-208ENST00000492806 BRI3O95415 125 aa13.09□□□□□ -0.31
CCDC13-208ENST00000492806 IGKV1-39P01597 117 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms