RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SCN9AQ15858 1988 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 MDC1Q14676 2089 aaKnown RBP1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 IGLV3-9A0A075B6K5 115 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 TRAV41A0A0B4J266 112 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 TMEM269A0A1B0GVZ9 245 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 ARRDC5A6NEK1 342 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 INMT-MINDY4F8WBC2 141 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 J3QKU1 62 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 M0R036 132 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 FAM228BP0C875 321 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 HIST1H1EP10412 219 aaKnown RBP1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 CCL5P13501 91 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 PEBP1P30086 187 aaKnown RBP1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 CA5AP35218 305 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 HINT1P49773 126 aaPredicted RBP1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 POLR2GP62487 172 aaKnown RBP eCLIP1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 PMAIP1Q13794 54 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 ZNF791Q3KP31 576 aaPredicted RBP1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 FAM201AQ5SY85 155 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 CCDC122Q5T0U0 273 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 ALKAL1Q6UXT8 129 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 Q6ZTI0 123 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 OR1M1Q8NGA1 313 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 OR8J2Q8NGG1 315 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 LHFPL5Q8TAF8 219 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 IMMP2LQ96T52 175 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 ANGPT4Q9Y264 503 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 LSM5Q9Y4Y9 91 aaKnown RBP1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 RBM7Q9Y580 266 aaKnown RBP1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 V9GYY5 206 aaPredicted RBP1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 SDK1Q7Z5N4 2213 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 RTEL1-TNFRSF6BF6WH68 1400 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 PXDNLA1KZ92 1463 aa1.05□□□□□ -2.24
HMGB1P30-201ENST00000492455 RTTNQ86VV8 2226 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 FN1P02751 2386 aaKnown RBP1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 NAV1Q8NEY1 1877 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 IGHV3-64A0A075B6Q5 118 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 TMSB15BA0A087X1C1 80 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 TGIF2-C20orf24A0A0A6YYL0 155 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 A0A0J9YW62 118 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 ZNF705FA8MVS1 300 aaPredicted RBP1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 KCNK1O00180 336 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 NSA2O95478 260 aaKnown RBP1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 IGKV1-16P04430 117 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 TFPTP0C1Z6 253 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 OR5G3P0C626 314 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 ALDH3A1P30838 453 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 IDH3GP51553 393 aaPredicted RBP1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 MYL6P60660 151 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 ERHP84090 104 aaKnown RBP1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 AKR1C1Q04828 323 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 ITGB3BPQ13352 177 aaPredicted RBP1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 OR2F1Q13607 317 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 HIST3H3Q16695 136 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 ACSM3Q53FZ2 586 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 LYZL1Q6UWQ5 148 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 SSX8Q7RTT4 187 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 SLC35E3Q7Z769 313 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 C1orf158Q8N1D5 194 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 TMEM86BQ8N661 226 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 OR51T1Q8NGJ9 327 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 OR1L8Q8NGR8 309 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 OR2T4Q8NH00 348 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 DCANP1Q8TF63 244 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 VCX3BQ9H321 246 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 MUC6Q6W4X9 2439 aa1.04□□□□□ -2.24
HMGB1P30-201ENST00000492455 SMIM23A6NLE4 172 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 RFPL4AA6NLU0 287 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 EEF1E1-BLOC1S5C9J1V9 151 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 RFPL4AL1F8VTS6 287 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 I3L521 148 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 J3QQQ9 107 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 KLRC4O43908 158 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 SERPINA6P08185 405 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 FGF6P10767 208 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 KCNE1P15382 129 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 RAB13P51153 203 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 RAP1GDS1P52306 607 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 OR4D2P58180 307 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 RPL26P61254 145 aaKnown RBP1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 AP1S1P61966 158 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 CAV1Q03135 178 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 GUK1Q16774 197 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 RGS21Q2M5E4 152 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 HIST2H3PS2Q5TEC6 136 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 SYPL2Q5VXT5 272 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 C8orf74Q6P047 294 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 DCXRQ7Z4W1 244 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 TBC1D19Q8N5T2 526 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 OR51D1Q8NGF3 324 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 SPACA4Q8TDM5 124 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 SLC35B4Q969S0 331 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 ROPN1LQ96C74 230 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 IMP4Q96G21 291 aaKnown RBP1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 CNBD2Q96M20 576 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 TIMM21Q9BVV7 248 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 XAGE1AQ9HD64 81 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 UBAP1Q9NZ09 502 aa1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 RSL24D1Q9UHA3 163 aaKnown RBP1.03□□□□□ -2.24
HMGB1P30-201ENST00000492455 RPL26L1Q9UNX3 145 aaKnown RBP1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms