RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 KCNIP4Q6PIL6 250 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 Q6ZT83 130 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 MDS2Q8NDY4 140 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 CCL17Q92583 94 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 SAMD10Q9BYL1 202 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 MS4A5Q9H3V2 200 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 PXMP4Q9Y6I8 212 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 SCO2A0A1W2PP80 73 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 LINC00596Q86U02 117 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 FAM216BQ8N7L0 139 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 TMEM140Q9NV12 185 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 CHD8Q9HCK8 2581 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 CREBBPQ92793 2442 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 KBTBD11O94819 623 aa12.65□□□□□ -0.38
TNFRSF1B-203ENST00000492361 NRN1LQ496H8 165 aa12.65□□□□□ -0.38
TNFRSF1B-203ENST00000492361 INO80CQ6PI98 192 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1B-203ENST00000492361 BHLHA15Q7RTS1 189 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1B-203ENST00000492361 BAGE3Q86Y29 109 aa12.65□□□□□ -0.38
TNFRSF1B-203ENST00000492361 BAGE2Q86Y30 109 aa12.65□□□□□ -0.38
TNFRSF1B-203ENST00000492361 CIB3Q96Q77 187 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1B-203ENST00000492361 HIST1H2BLQ99880 126 aa12.65□□□□□ -0.38
TNFRSF1B-203ENST00000492361 MRPS18CQ9Y3D5 142 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1B-203ENST00000492361 DLX1P56177 255 aa12.65□□□□□ -0.38
TNFRSF1B-203ENST00000492361 ZNF705AQ6ZN79 300 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1B-203ENST00000492361 IRF2P14316 349 aa12.65□□□□□ -0.38
TNFRSF1B-203ENST00000492361 HOXA6P31267 233 aa12.65□□□□□ -0.38
TNFRSF1B-203ENST00000492361 ERVFC1-1P60608 527 aa12.65□□□□□ -0.38
TNFRSF1B-203ENST00000492361 ATG101Q9BSB4 218 aa12.65□□□□□ -0.38
TNFRSF1B-203ENST00000492361 SMDT1Q9H4I9 107 aa12.65□□□□□ -0.38
TNFRSF1B-203ENST00000492361 H3BTX0 84 aa12.64□□□□□ -0.39
TNFRSF1B-203ENST00000492361 CBLN1P23435 193 aa12.64□□□□□ -0.39
TNFRSF1B-203ENST00000492361 MRPS11P82912 194 aaKnown RBP12.64□□□□□ -0.39
TNFRSF1B-203ENST00000492361 HTD2P86397 168 aa12.64□□□□□ -0.39
TNFRSF1B-203ENST00000492361 PSG5Q15238 335 aa12.64□□□□□ -0.39
TNFRSF1B-203ENST00000492361 ZNF114Q8NC26 417 aa12.64□□□□□ -0.39
TNFRSF1B-203ENST00000492361 COL5A1P20908 1838 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1B-203ENST00000492361 TRAV17A0A0B4J275 112 aa12.64□□□□□ -0.39
TNFRSF1B-203ENST00000492361 IGHV2OR16-5A0A0B4J2B6 119 aa12.64□□□□□ -0.39
TNFRSF1B-203ENST00000492361 PPIHO43447 177 aaKnown RBP12.64□□□□□ -0.39
TNFRSF1B-203ENST00000492361 FOXH1O75593 365 aa12.64□□□□□ -0.39
TNFRSF1B-203ENST00000492361 ZNF146Q15072 292 aa12.64□□□□□ -0.39
TNFRSF1B-203ENST00000492361 OR6C3Q9NZP0 311 aa12.64□□□□□ -0.39
TNFRSF1B-203ENST00000492361 HCFC1P51610 2035 aa12.64□□□□□ -0.39
TNFRSF1B-203ENST00000492361 TDGF1P13385 188 aa12.64□□□□□ -0.39
TNFRSF1B-203ENST00000492361 PIGBOS1A0A0B4J2F0 54 aa12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 MBP02144 154 aa12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 GNB2P62879 340 aa12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 ANKHD1Q8IWZ3 2542 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 IQCF6A8MYZ5 107 aa12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 KLK10O43240 276 aa12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 REG1AP05451 166 aa12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 NTF3P20783 257 aa12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 KLF3P57682 345 aaPredicted RBP12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 RAB31Q13636 194 aa12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 PSMG3Q9BT73 122 aaPredicted RBP12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 SEBOXQ9HB31 216 aaPredicted RBP12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 HSPB7Q9UBY9 170 aa12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 FTH1P19P0C7X4 201 aa12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 IER3P46695 156 aa12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 TNFAIP6P98066 277 aaPredicted RBP12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 MRPL54Q6P161 138 aaKnown RBP12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 TMEM14EPQ6UXP3 125 aa12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 TMEM256Q8N2U0 113 aa12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 OR1P1Q8NH06 330 aa12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 TCF19Q9Y242 345 aa12.63□□□□□ -0.39
TNFRSF1B-203ENST00000492361 SPTBN4Q9H254 2564 aa12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 TNRC6AQ8NDV7 1962 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 IGHV1-18A0A0C4DH31 117 aa12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 B4DEV8 164 aa12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 CEACAM1P13688 526 aa12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 CD82P27701 267 aa12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 RPL29P47914 159 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 ZNF134P52741 427 aa12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 Q6ZS49 121 aa12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 DOLPP1Q86YN1 238 aa12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 Q8NFD4 153 aa12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 MBD3L1Q8WWY6 194 aa12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 PITPNC1Q9UKF7 332 aa12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 OR5G3P0C626 314 aa12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 IGFBP2P18065 325 aa12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 ZADH2Q8N4Q0 377 aa12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 SEPSECSQ9HD40 501 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 CALYQ9NYX4 217 aa12.62□□□□□ -0.39
TNFRSF1B-203ENST00000492361 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 CGAP01215 116 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 CYP2G1PQ6ZSU1 146 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 ADAMTS20P59510 1910 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 TMEM265A0A087WTH1 108 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 A0A087WWC5 75 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 HRASP01112 189 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 NPY1RP25929 384 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 ERVK11-1P61568 191 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 GNB1P62873 340 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 SUMO1P63165 101 aaKnown RBP12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 CYB5R2Q6BCY4 276 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 SLC35E4Q6ICL7 350 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 WDR31Q8NA23 367 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 UHRF2Q96PU4 802 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 RYDENQ9NUL5 291 aaKnown RBP12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 NOTCH3Q9UM47 2321 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms