RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 SCPEP1Q9HB40 452 aa19■□□□□ 0.63
UPF3A-209ENST00000492270 ANKRD34BA5PLL1 514 aa18.99■□□□□ 0.63
UPF3A-209ENST00000492270 HMX3A6NHT5 357 aa18.99■□□□□ 0.63
UPF3A-209ENST00000492270 E7EUB6 86 aa18.99■□□□□ 0.63
UPF3A-209ENST00000492270 BRI3O95415 125 aa18.99■□□□□ 0.63
UPF3A-209ENST00000492270 HRASP01112 189 aa18.99■□□□□ 0.63
UPF3A-209ENST00000492270 MYOD1P15172 320 aa18.99■□□□□ 0.63
UPF3A-209ENST00000492270 AADACL3Q5VUY0 350 aa18.99■□□□□ 0.63
UPF3A-209ENST00000492270 CLVS1Q8IUQ0 354 aaPredicted RBP18.99■□□□□ 0.63
UPF3A-209ENST00000492270 PRR25Q96S07 402 aa18.99■□□□□ 0.63
UPF3A-209ENST00000492270 SPIN2AQ99865 258 aa18.99■□□□□ 0.63
UPF3A-209ENST00000492270 SPIN2BQ9BPZ2 258 aa18.99■□□□□ 0.63
UPF3A-209ENST00000492270 A0A0G2JLM5 398 aa18.98■□□□□ 0.63
UPF3A-209ENST00000492270 A0A1B0GW64 132 aa18.98■□□□□ 0.63
UPF3A-209ENST00000492270 TEX22C9J3V5 150 aa18.98■□□□□ 0.63
UPF3A-209ENST00000492270 RBFOX2O43251 390 aaKnown RBP eCLIP18.98■□□□□ 0.63
UPF3A-209ENST00000492270 RLN1P04808 185 aa18.98■□□□□ 0.63
UPF3A-209ENST00000492270 ECI1P42126 302 aa18.98■□□□□ 0.63
UPF3A-209ENST00000492270 ZNF45Q02386 682 aa18.98■□□□□ 0.63
UPF3A-209ENST00000492270 OR4A47Q6IF82 309 aa18.98■□□□□ 0.63
UPF3A-209ENST00000492270 C19orf35Q6ZS72 473 aa18.98■□□□□ 0.63
UPF3A-209ENST00000492270 EXTL2Q9UBQ6 330 aa18.98■□□□□ 0.63
UPF3A-209ENST00000492270 ADAM30Q9UKF2 790 aa18.98■□□□□ 0.63
UPF3A-209ENST00000492270 COL7A1Q02388 2944 aa18.98■□□□□ 0.63
UPF3A-209ENST00000492270 SAP30O75446 220 aa18.97■□□□□ 0.63
UPF3A-209ENST00000492270 S1PR2O95136 353 aa18.97■□□□□ 0.63
UPF3A-209ENST00000492270 IL6RP08887 468 aaPredicted RBP18.97■□□□□ 0.63
UPF3A-209ENST00000492270 RCVRNP35243 200 aa18.97■□□□□ 0.63
UPF3A-209ENST00000492270 RPL27AP46776 148 aaKnown RBP18.97■□□□□ 0.63
UPF3A-209ENST00000492270 OR6F1Q8NGZ6 308 aa18.97■□□□□ 0.63
UPF3A-209ENST00000492270 HPRT1P00492 218 aa18.96■□□□□ 0.63
UPF3A-209ENST00000492270 TRBV12-3P01733 135 aa18.96■□□□□ 0.63
UPF3A-209ENST00000492270 TTC9CQ8N5M4 171 aa18.96■□□□□ 0.63
UPF3A-209ENST00000492270 FYTTD1Q96QD9 318 aaKnown RBP18.96■□□□□ 0.63
UPF3A-209ENST00000492270 MIXL1Q9H2W2 232 aa18.96■□□□□ 0.63
UPF3A-209ENST00000492270 RANGRFQ9HD47 186 aaPredicted RBP18.96■□□□□ 0.63
UPF3A-209ENST00000492270 BET1LQ9NYM9 111 aa18.96■□□□□ 0.63
UPF3A-209ENST00000492270 ZMAT5Q9UDW3 170 aaKnown RBP18.96■□□□□ 0.63
UPF3A-209ENST00000492270 SORL1Q92673 2214 aa18.96■□□□□ 0.63
UPF3A-209ENST00000492270 TRAV3A0A0B4J244 114 aa18.95■□□□□ 0.62
UPF3A-209ENST00000492270 PGLYRP1O75594 196 aaPredicted RBP18.95■□□□□ 0.62
UPF3A-209ENST00000492270 RPA2P15927 270 aa18.95■□□□□ 0.62
UPF3A-209ENST00000492270 MAS1LP35410 378 aa18.95■□□□□ 0.62
UPF3A-209ENST00000492270 TAS2R31P59538 309 aa18.95■□□□□ 0.62
UPF3A-209ENST00000492270 RPL8P62917 257 aaKnown RBP18.95■□□□□ 0.62
UPF3A-209ENST00000492270 ZNF343Q6P1L6 599 aa18.95■□□□□ 0.62
UPF3A-209ENST00000492270 ACSM6Q6P461 480 aa18.95■□□□□ 0.62
UPF3A-209ENST00000492270 BORCS5Q969J3 196 aa18.95■□□□□ 0.62
UPF3A-209ENST00000492270 HRASLSQ9HDD0 168 aa18.95■□□□□ 0.62
UPF3A-209ENST00000492270 AKIP1Q9NQ31 210 aa18.95■□□□□ 0.62
UPF3A-209ENST00000492270 M0QYG6 137 aa18.94■□□□□ 0.62
UPF3A-209ENST00000492270 ZNF735P0CB33 412 aa18.94■□□□□ 0.62
UPF3A-209ENST00000492270 NQO2P16083 231 aa18.94■□□□□ 0.62
UPF3A-209ENST00000492270 INSL3P51460 131 aa18.94■□□□□ 0.62
UPF3A-209ENST00000492270 TSPAN5P62079 268 aa18.94■□□□□ 0.62
UPF3A-209ENST00000492270 RHOGP84095 191 aa18.94■□□□□ 0.62
UPF3A-209ENST00000492270 ZNF429Q86V71 674 aa18.94■□□□□ 0.62
UPF3A-209ENST00000492270 OR52I2Q8NH67 350 aa18.94■□□□□ 0.62
UPF3A-209ENST00000492270 USMG5Q96IX5 58 aa18.94■□□□□ 0.62
UPF3A-209ENST00000492270 KLK11Q9UBX7 282 aa18.94■□□□□ 0.62
UPF3A-209ENST00000492270 TRBV9A0A0B4J1U6 114 aa18.93■□□□□ 0.62
UPF3A-209ENST00000492270 CGB1A6NKQ9 187 aa18.93■□□□□ 0.62
UPF3A-209ENST00000492270 GPR31O00270 319 aa18.93■□□□□ 0.62
UPF3A-209ENST00000492270 AREGP15514 252 aa18.93■□□□□ 0.62
UPF3A-209ENST00000492270 HLA-GP17693 338 aa18.93■□□□□ 0.62
UPF3A-209ENST00000492270 POU2AF1Q16633 256 aa18.93■□□□□ 0.62
UPF3A-209ENST00000492270 LAX1Q8IWV1 398 aa18.93■□□□□ 0.62
UPF3A-209ENST00000492270 OR4A5Q8NH83 315 aa18.93■□□□□ 0.62
UPF3A-209ENST00000492270 ABHD1Q96SE0 405 aa18.93■□□□□ 0.62
UPF3A-209ENST00000492270 PLEKHA2Q9HB19 425 aa18.93■□□□□ 0.62
UPF3A-209ENST00000492270 TMEM140Q9NV12 185 aa18.93■□□□□ 0.62
UPF3A-209ENST00000492270 ZNF256Q9Y2P7 627 aaPredicted RBP18.93■□□□□ 0.62
UPF3A-209ENST00000492270 CTDSP2O14595 271 aa18.92■□□□□ 0.62
UPF3A-209ENST00000492270 PHLDA2Q53GA4 152 aa18.92■□□□□ 0.62
UPF3A-209ENST00000492270 CD300LFQ8TDQ1 290 aa18.92■□□□□ 0.62
UPF3A-209ENST00000492270 RAB2BQ8WUD1 216 aa18.92■□□□□ 0.62
UPF3A-209ENST00000492270 SLC2A9Q9NRM0 540 aa18.92■□□□□ 0.62
UPF3A-209ENST00000492270 COMMD9Q9P000 198 aa18.92■□□□□ 0.62
UPF3A-209ENST00000492270 PEF1Q9UBV8 284 aaKnown RBP18.92■□□□□ 0.62
UPF3A-209ENST00000492270 FAM223BA6NKX1 122 aa18.91■□□□□ 0.62
UPF3A-209ENST00000492270 UPK2O00526 184 aa18.91■□□□□ 0.62
UPF3A-209ENST00000492270 RGS5O15539 181 aa18.91■□□□□ 0.62
UPF3A-209ENST00000492270 OR2J3O76001 311 aa18.91■□□□□ 0.62
UPF3A-209ENST00000492270 REG1AP05451 166 aa18.91■□□□□ 0.62
UPF3A-209ENST00000492270 ZP3P21754 424 aa18.91■□□□□ 0.62
UPF3A-209ENST00000492270 F2RP25116 425 aa18.91■□□□□ 0.62
UPF3A-209ENST00000492270 EXOSC2Q13868 293 aaKnown RBP18.91■□□□□ 0.62
UPF3A-209ENST00000492270 HAPLN4Q86UW8 402 aa18.91■□□□□ 0.62
UPF3A-209ENST00000492270 FAM223AQ8IWN6 122 aa18.91■□□□□ 0.62
UPF3A-209ENST00000492270 CMTM1Q8IZ96 169 aa18.91■□□□□ 0.62
UPF3A-209ENST00000492270 DMBX1Q8NFW5 382 aa18.91■□□□□ 0.62
UPF3A-209ENST00000492270 AIFM2Q9BRQ8 373 aa18.91■□□□□ 0.62
UPF3A-209ENST00000492270 ZNF257Q9Y2Q1 563 aa18.91■□□□□ 0.62
UPF3A-209ENST00000492270 DPPA5A6NC42 116 aa18.9■□□□□ 0.62
UPF3A-209ENST00000492270 NPIPB5A8MRT5 1133 aa18.9■□□□□ 0.62
UPF3A-209ENST00000492270 LY86O95711 162 aa18.9■□□□□ 0.62
UPF3A-209ENST00000492270 LPAR6P43657 344 aa18.9■□□□□ 0.62
UPF3A-209ENST00000492270 TMBIM6P55061 237 aa18.9■□□□□ 0.62
UPF3A-209ENST00000492270 ZNF585BQ52M93 769 aa18.9■□□□□ 0.62
UPF3A-209ENST00000492270 VAX1Q5SQQ9 334 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms