RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 KIR2DL5AQ8N109 375 aa4.84□□□□□ -1.63
VPS41-214ENST00000490924 Q8N7P7 452 aa4.84□□□□□ -1.63
VPS41-214ENST00000490924 IL1F10Q8WWZ1 152 aa4.84□□□□□ -1.63
VPS41-214ENST00000490924 ADTRPQ96IZ2 230 aa4.84□□□□□ -1.63
VPS41-214ENST00000490924 THOC3Q96J01 351 aaKnown RBP4.84□□□□□ -1.63
VPS41-214ENST00000490924 YPEL2Q96QA6 119 aa4.84□□□□□ -1.63
VPS41-214ENST00000490924 VSIRQ9H7M9 311 aa4.84□□□□□ -1.63
VPS41-214ENST00000490924 IL36RNQ9UBH0 155 aa4.84□□□□□ -1.63
VPS41-214ENST00000490924 SLC25A10Q9UBX3 287 aaPredicted RBP4.84□□□□□ -1.63
VPS41-214ENST00000490924 KCNS2Q9ULS6 477 aa4.84□□□□□ -1.63
VPS41-214ENST00000490924 LSM4Q9Y4Z0 139 aaKnown RBP4.84□□□□□ -1.63
VPS41-214ENST00000490924 PXMP4Q9Y6I8 212 aa4.84□□□□□ -1.63
VPS41-214ENST00000490924 KMT2EQ8IZD2 1858 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 EPG5Q9HCE0 2579 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 RTTNQ86VV8 2226 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 C15orf62A8K5M9 175 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 PRSS46E5RG02 174 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 INS-IGF2F8WCM5 200 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 ZG16O60844 167 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 RHBDL1O75783 438 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 KRASP01116 189 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 PDGFBP01127 241 aaPredicted RBP4.83□□□□□ -1.64
VPS41-214ENST00000490924 IGHG3P01860 377 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 HBZP02008 142 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 GYPAP02724 150 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 CFIP05156 583 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 SP1P08047 785 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 CCNOP22674 350 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 CD82P27701 267 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 OR10J1P30954 320 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 RPL29P47914 159 aaKnown RBP4.83□□□□□ -1.64
VPS41-214ENST00000490924 IDH3GP51553 393 aaPredicted RBP4.83□□□□□ -1.64
VPS41-214ENST00000490924 ERVFC1-1P60608 527 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 Q0VG73 95 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 GFI1BQ5VTD9 330 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 WDR73Q6P4I2 378 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 RASL11AQ6T310 242 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 ACP7Q6ZNF0 438 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 ASCL5Q7RTU5 278 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 WDR86Q86TI4 376 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 MDP1Q86V88 176 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 TMEM178AQ8NBL3 297 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 OR4F5Q8NH21 305 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 R3HDM4Q96D70 268 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 WDYHV1Q96HA8 205 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 SFRP2Q96HF1 295 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 OR4F4Q96R69 305 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 C20orf144Q9BQM9 153 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 OR2J1Q9GZK6 312 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 OR2D2Q9H210 308 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 LINC00574Q9H8X3 128 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 CLCF1Q9UBD9 225 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 PPP1R3CQ9UQK1 317 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 ZNF257Q9Y2Q1 563 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 RFNGQ9Y644 331 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 KMT2BQ9UMN6 2715 aaPredicted RBP4.83□□□□□ -1.64
VPS41-214ENST00000490924 TRIOO75962 3097 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 CACNA1GO43497 2377 aa4.83□□□□□ -1.64
VPS41-214ENST00000490924 ZDBF2Q9HCK1 2354 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 SAA2-SAA4A0A096LPE2 208 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 TRGV10A0A0A0MS01 117 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 A0A1W2PPQ1 181 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 A0A1W2PPV4 95 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 A8MXE2 369 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 C15orf65H3BRN8 121 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 SIRPB1O00241 398 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 PAGE4O60829 102 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 S1PR2O95136 353 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 IGLV1-44P01699 117 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 JMJD7P0C870 316 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 IL3RAP26951 378 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 DUTP33316 252 aaKnown RBP4.82□□□□□ -1.64
VPS41-214ENST00000490924 TIMP3P35625 211 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 MAGEA5P43359 124 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 VDAC2P45880 294 aaPredicted RBP4.82□□□□□ -1.64
VPS41-214ENST00000490924 OR3A1P47881 315 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 MEOX1P50221 254 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 FGF8P55075 233 aaPredicted RBP4.82□□□□□ -1.64
VPS41-214ENST00000490924 ELLP55199 621 aaPredicted RBP4.82□□□□□ -1.64
VPS41-214ENST00000490924 BRWD1-AS2P59051 145 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 ERVK-16P61578 105 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 RHOBP62745 196 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 GAGE1Q13065 139 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 P2RY6Q15077 328 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 SPINK14Q6IE38 97 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 OR8G2PQ6IF36 304 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 ZNF664Q8N3J9 261 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 GCSAMQ8N6F7 178 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 NAXEQ8NCW5 288 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 OR10G8Q8NGN5 311 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 OR4S2Q8NH73 311 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 SMIM12Q96EX1 92 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 SDSLQ96GA7 329 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 COQ2Q96H96 371 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 SLC35E1Q96K37 410 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 UHRF2Q96PU4 802 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 RNF2Q99496 336 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 NEU1Q99519 415 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 GNB1LQ9BYB4 327 aa4.82□□□□□ -1.64
VPS41-214ENST00000490924 OPN3Q9H1Y3 402 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms