RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	S100A7	P31151	101 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	CDC34	P49427	236 aa	Predicted RBP	5.25	□□□□□ -1.57
FN1-223	ENST00000490833	AKR1D1	P51857	326 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	PRRX1	P54821	245 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	FAM3B	P58499	235 aa	Predicted RBP	5.25	□□□□□ -1.57
FN1-223	ENST00000490833	SELENOT	P62341	195 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	EDDM3A	Q14507	147 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	BSX	Q3C1V8	233 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	ADAM5	Q6NVV9	412 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	LCN15	Q6UWW0	184 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	CLEC9A	Q6UXN8	241 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	GFRAL	Q6UXV0	394 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	SLC25A48	Q6ZT89	311 aa	Known RBP	5.25	□□□□□ -1.57
FN1-223	ENST00000490833	SEM1	Q6ZVN7	128 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	MYPOP	Q86VE0	399 aa	Predicted RBP	5.25	□□□□□ -1.57
FN1-223	ENST00000490833	PDPN	Q86YL7	162 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	ZNF808	Q8N4W9	903 aa	Predicted RBP	5.25	□□□□□ -1.57
FN1-223	ENST00000490833	RBMXL3	Q8N7X1	1067 aa	Known RBP	5.25	□□□□□ -1.57
FN1-223	ENST00000490833	CYB561D1	Q8N8Q1	229 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	OR4C13	Q8NGP0	309 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	ITLN1	Q8WWA0	313 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	BSCL2	Q96G97	398 aa	Predicted RBP	5.25	□□□□□ -1.57
FN1-223	ENST00000490833	RHOV	Q96L33	236 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	RARRES2	Q99969	163 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	SMIM7	Q9BQ49	75 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	PLEKHA3	Q9HB20	300 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	SLC45A2	Q9UMX9	530 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	PPIAL4A	Q9Y536	164 aa		5.25	□□□□□ -1.57
FN1-223	ENST00000490833	MED12L	Q86YW9	2145 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	MED13	Q9UHV7	2174 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	PMS2P5	A8MQ11	134 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833		C9JQL5	133 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	PPP5D1	E7EU14	171 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833		H3BP45	60 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833		J3QR06	171 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	TMPRSS2	O15393	492 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	IGLV1-40	P01703	118 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	IGHV1-46	P01743	117 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	FABP1	P07148	127 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	AREG	P15514	252 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	BMP5	P22003	454 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	NPY1R	P25929	384 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	APOBEC3A	P31941	199 aa	Predicted RBP	5.24	□□□□□ -1.57
FN1-223	ENST00000490833	SSTR5	P35346	364 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	RPS10	P46783	165 aa	Known RBP	5.24	□□□□□ -1.57
FN1-223	ENST00000490833	MEOX2	P50222	304 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	RPL30	P62888	115 aa	Known RBP	5.24	□□□□□ -1.57
FN1-223	ENST00000490833	RPL31	P62899	125 aa	Known RBP	5.24	□□□□□ -1.57
FN1-223	ENST00000490833	RUNX1	Q01196	453 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	EFNB3	Q15768	340 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	AKIRIN2	Q53H80	203 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	C2orf83	Q53S99	150 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	PQLC2	Q6ZP29	291 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	DOLPP1	Q86YN1	238 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	IQCF2	Q8IXL9	164 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	ODF3L1	Q8IXM7	274 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	RPP25L	Q8N5L8	163 aa	Known RBP	5.24	□□□□□ -1.57
FN1-223	ENST00000490833	FAM24B	Q8N5W8	94 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	SLC24A4	Q8NFF2	622 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	OR1L6	Q8NGR2	347 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	OR1L8	Q8NGR8	309 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	RFESD	Q8TAC1	157 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	ZNF596	Q8TC21	504 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	RNASEH2C	Q8TDP1	164 aa	Known RBP	5.24	□□□□□ -1.57
FN1-223	ENST00000490833	CA5BP1	Q8WTZ4	195 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	C22orf15	Q8WYQ4	148 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	DDB2	Q92466	427 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	RAB24	Q969Q5	203 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	FLYWCH2	Q96CP2	140 aa	Known RBP	5.24	□□□□□ -1.57
FN1-223	ENST00000490833	ACY3	Q96HD9	319 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	FAM210B	Q96KR6	192 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	ZNF714	Q96N38	554 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	SRSF8	Q9BRL6	282 aa	Known RBP	5.24	□□□□□ -1.57
FN1-223	ENST00000490833	RSG1	Q9BU20	258 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	CHRDL1	Q9BU40	450 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	COMMD5	Q9GZQ3	224 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	IFI27L2	Q9H2X8	130 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	SAP30L	Q9HAJ7	183 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	TMEM140	Q9NV12	185 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	SLC25A10	Q9UBX3	287 aa	Predicted RBP	5.24	□□□□□ -1.57
FN1-223	ENST00000490833	PITPNC1	Q9UKF7	332 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	5.24	□□□□□ -1.57
FN1-223	ENST00000490833	WDR87	Q6ZQQ6	2873 aa		5.24	□□□□□ -1.57
FN1-223	ENST00000490833		A0A087X0M5	115 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833		A0A1B0GX30	115 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	ZNF98	A6NK75	572 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	LINC00473	A8K010	186 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	C11orf94	C9JXX5	98 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833		H7BYZ3	331 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833		K7ENP7	123 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	SCGB2A1	O75556	95 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	OR4A8	P0C604	315 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	VDAC2	P45880	294 aa	Predicted RBP	5.23	□□□□□ -1.57
FN1-223	ENST00000490833	CDX1	P47902	265 aa	Predicted RBP	5.23	□□□□□ -1.57
FN1-223	ENST00000490833	ID4	P47928	161 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	ZNF137P	P52743	207 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	CEBPG	P53567	150 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	CCL20	P78556	96 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	PRCD	Q00LT1	54 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	TCF15	Q12870	199 aa		5.23	□□□□□ -1.57

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