RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 ZNF429Q86V71 674 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 COMMD7Q86VX2 200 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 PDPNQ86YL7 162 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 TGIF2LXQ8IUE1 241 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 KRTAP1-3Q8IUG1 177 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 ODF3L1Q8IXM7 274 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 PIP4P2Q8N4L2 257 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 LY6G5BQ8NDX9 201 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 BEND2Q8NDZ0 799 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 OR4C13Q8NGP0 309 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 OR4A5Q8NH83 315 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 SCGB1C1Q8TD33 95 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 DTD1Q8TEA8 209 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 LEAP2Q969E1 77 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 LHX4Q969G2 390 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 PINX1Q96BK5 328 aaKnown RBP8.38□□□□□ -1.07
HDAC3-210ENST00000490808 Q96MF0 132 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 ATP5SQ99766 215 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 GINS3Q9BRX5 216 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 RBKSQ9H477 322 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 C11orf1Q9H5F2 150 aa8.38□□□□□ -1.07
HDAC3-210ENST00000490808 RPS10-NUDT3A0A1W2PQS6 291 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 KIAA1324LA8MWY0 1029 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-210ENST00000490808 UMAD1C9J7I0 102 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 H7C2Y5 167 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 SHOXO15266 292 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 KCNAB3O43448 404 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 ENSAO43768 121 aaKnown RBP8.37□□□□□ -1.07
HDAC3-210ENST00000490808 PROP1O75360 226 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 USF1P22415 310 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-210ENST00000490808 ATP5IP56385 69 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-210ENST00000490808 RAB11AP62491 216 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 SPANXN5Q5MJ07 72 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 MRPL41Q8IXM3 137 aaKnown RBP8.37□□□□□ -1.07
HDAC3-210ENST00000490808 LILRB2Q8N423 598 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 KIR3DL3Q8N743 410 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 ZNF525Q8N782 197 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 ZNF383Q8NA42 475 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 WFDC11Q8NEX6 87 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 OR10P1Q8NGE3 313 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 OR5C1Q8NGR4 320 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 FLYWCH2Q96CP2 140 aaKnown RBP8.37□□□□□ -1.07
HDAC3-210ENST00000490808 RHOVQ96L33 236 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 CITED4Q96RK1 184 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 MDFIQ99750 246 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 ZNF251Q9BRH9 671 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 REG4Q9BYZ8 158 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 SMIM3Q9BZL3 60 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 ARV1Q9H2C2 271 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 ONECUT1Q9UBC0 465 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 AUP1Q9Y679 476 aa8.37□□□□□ -1.07
HDAC3-210ENST00000490808 IGHV2-26A0A0B4J1V2 119 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 IGSF23A1L1A6 192 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 TEX46H3BTG2 121 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 TRIM77I1YAP6 450 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 FGF16O43320 207 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 NDUFS7O75251 213 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 NXPH3O95157 252 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 NMBP08949 121 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 CT45A6P0DMU7 189 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 CT45A5P0DMU8 189 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 CT45A7P0DMV0 189 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 IAPPP10997 89 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 LGALS7P47929 136 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 SULT1A2P50226 295 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 BRWD1-AS2P59051 145 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 RAB2AP61019 212 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 VMA21Q3ZAQ7 101 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 AARDQ4LEZ3 155 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 PDLIM3Q53GG5 364 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-210ENST00000490808 TMEM177Q53S58 311 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 Q71RC1 249 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-210ENST00000490808 HSD17B13Q7Z5P4 300 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-210ENST00000490808 PUSL1Q8N0Z8 303 aaKnown RBP8.36□□□□□ -1.07
HDAC3-210ENST00000490808 STPG2Q8N412 459 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 OR5AN1Q8NGI8 311 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 TMED6Q8WW62 240 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 PARD6GQ9BYG4 376 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-210ENST00000490808 TMEM140Q9NV12 185 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 BET1LQ9NYM9 111 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 FOXA2Q9Y261 457 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-210ENST00000490808 ZNF257Q9Y2Q1 563 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 WASHC3Q9Y3C0 194 aa8.36□□□□□ -1.07
HDAC3-210ENST00000490808 ZNF705EA8MWA4 302 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-210ENST00000490808 SOX15O60248 233 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 FBXO24O75426 580 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 FOXH1O75593 365 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 CST7O76096 145 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 OR8U8P0C7N1 319 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 SPP1P10451 314 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 DYNLT3P51808 116 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 PAX9P55771 341 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 HSPE1P61604 102 aaKnown RBP8.35□□□□□ -1.07
HDAC3-210ENST00000490808 RPS16P62249 146 aaKnown RBP8.35□□□□□ -1.07
HDAC3-210ENST00000490808 IZUMO4Q1ZYL8 232 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 HLA-DRB5Q30154 266 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 UQCC3Q6UW78 93 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 DPPA3Q6W0C5 159 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 SSX9Q7RTT3 188 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 COMMD1Q8N668 190 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms