RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 OR4A5Q8NH83 315 aa11.38□□□□□ -0.59
VPS26A-205ENST00000489656 VSTM2AQ8TAG5 236 aa11.38□□□□□ -0.59
VPS26A-205ENST00000489656 TSNAXQ99598 290 aaKnown RBP11.38□□□□□ -0.59
VPS26A-205ENST00000489656 TNFSF18Q9UNG2 199 aa11.38□□□□□ -0.59
VPS26A-205ENST00000489656 RCL1Q9Y2P8 373 aaKnown RBP11.38□□□□□ -0.59
VPS26A-205ENST00000489656 FXYD6-FXYD2A0A087WZ82 144 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 IGHV3-72A0A0B4J1Y9 119 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 E5RGE8 158 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 UPK2O00526 184 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 KBTBD11O94819 623 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 SPDEFO95238 335 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 SCGB1D2O95969 90 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 FSHBP01225 129 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 SAA1P0DJI8 122 aaPredicted RBP11.37□□□□□ -0.59
VPS26A-205ENST00000489656 IGHV4-38-2P0DP08 117 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 DYNLT3P51808 116 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 TNFRSF9Q07011 255 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 VMA21Q3ZAQ7 101 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 LAMTOR1Q6IAA8 161 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 ZNF546Q86UE3 836 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 THNSL2Q86YJ6 484 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 C9orf62Q8N4C0 152 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 TEX45Q8NA69 505 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 OR4A16Q8NH70 328 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 TMEM167AQ8TBQ9 72 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 C17orf50Q8WW18 174 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 MEGF9Q9H1U4 602 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 TMEM14BQ9NUH8 114 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 OR5AC2Q9NZP5 309 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 FOXA2Q9Y261 457 aaPredicted RBP11.37□□□□□ -0.59
VPS26A-205ENST00000489656 NSG2Q9Y328 171 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 LSM5Q9Y4Y9 91 aaKnown RBP11.37□□□□□ -0.59
VPS26A-205ENST00000489656 CELSR1Q9NYQ6 3014 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 MYO9AB2RTY4 2548 aa11.37□□□□□ -0.59
VPS26A-205ENST00000489656 TRAV3A0A0B4J244 114 aa11.36□□□□□ -0.59
VPS26A-205ENST00000489656 MED6O75586 246 aa11.36□□□□□ -0.59
VPS26A-205ENST00000489656 MOSP00540 346 aa11.36□□□□□ -0.59
VPS26A-205ENST00000489656 CRYGBP07316 175 aa11.36□□□□□ -0.59
VPS26A-205ENST00000489656 PVALBP20472 110 aaPredicted RBP11.36□□□□□ -0.59
VPS26A-205ENST00000489656 BRS3P32247 399 aa11.36□□□□□ -0.59
VPS26A-205ENST00000489656 POLR2GP62487 172 aaKnown RBP eCLIP11.36□□□□□ -0.59
VPS26A-205ENST00000489656 ZNF345Q14585 488 aa11.36□□□□□ -0.59
VPS26A-205ENST00000489656 RUSC1-AS1Q66K80 236 aa11.36□□□□□ -0.59
VPS26A-205ENST00000489656 CIARTQ8N365 385 aaPredicted RBP11.36□□□□□ -0.59
VPS26A-205ENST00000489656 Q8N6K4 173 aa11.36□□□□□ -0.59
VPS26A-205ENST00000489656 OR2T10Q8NGZ9 312 aa11.36□□□□□ -0.59
VPS26A-205ENST00000489656 GRPEL2Q8TAA5 225 aa11.36□□□□□ -0.59
VPS26A-205ENST00000489656 RITA1Q96K30 269 aa11.36□□□□□ -0.59
VPS26A-205ENST00000489656 RAB40CQ96S21 281 aa11.36□□□□□ -0.59
VPS26A-205ENST00000489656 PRNDQ9UKY0 176 aa11.36□□□□□ -0.59
VPS26A-205ENST00000489656 WRBO00258 174 aa11.35□□□□□ -0.59
VPS26A-205ENST00000489656 ARPC5O15511 151 aa11.35□□□□□ -0.59
VPS26A-205ENST00000489656 SYNGR2O43760 224 aa11.35□□□□□ -0.59
VPS26A-205ENST00000489656 LY86O95711 162 aa11.35□□□□□ -0.59
VPS26A-205ENST00000489656 IGKV1D-33P01593 117 aa11.35□□□□□ -0.59
VPS26A-205ENST00000489656 IGKV1-33P01594 117 aa11.35□□□□□ -0.59
VPS26A-205ENST00000489656 P2RY1P47900 373 aa11.35□□□□□ -0.59
VPS26A-205ENST00000489656 SPCS3P61009 180 aa11.35□□□□□ -0.59
VPS26A-205ENST00000489656 PSG5Q15238 335 aa11.35□□□□□ -0.59
VPS26A-205ENST00000489656 LGALSLQ3ZCW2 172 aaPredicted RBP11.35□□□□□ -0.59
VPS26A-205ENST00000489656 ACOT7LQ6ZUV0 252 aa11.35□□□□□ -0.59
VPS26A-205ENST00000489656 NPBQ8NG41 125 aa11.35□□□□□ -0.59
VPS26A-205ENST00000489656 DCUN1D4Q92564 292 aa11.35□□□□□ -0.59
VPS26A-205ENST00000489656 RBMXL1Q96E39 390 aaKnown RBP11.35□□□□□ -0.59
VPS26A-205ENST00000489656 EAF1Q96JC9 268 aaPredicted RBP11.35□□□□□ -0.59
VPS26A-205ENST00000489656 QTRT1Q9BXR0 403 aaKnown RBP11.35□□□□□ -0.59
VPS26A-205ENST00000489656 FKBP11Q9NYL4 201 aa11.35□□□□□ -0.59
VPS26A-205ENST00000489656 ZNF257Q9Y2Q1 563 aa11.35□□□□□ -0.59
VPS26A-205ENST00000489656 RNF222A6NCQ9 220 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 CHST1O43916 411 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 SSSCA1O60232 199 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 RBMXL2O75526 392 aaKnown RBP11.34□□□□□ -0.59
VPS26A-205ENST00000489656 OR2F2O95006 317 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 NDUFA3O95167 84 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 SNRNP70P08621 437 aaKnown RBP11.34□□□□□ -0.59
VPS26A-205ENST00000489656 CXCL2P19875 107 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 PAX9P55771 341 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 TAS2R30P59541 319 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 OR2B8PP59922 312 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 HSPE1P61604 102 aaKnown RBP11.34□□□□□ -0.59
VPS26A-205ENST00000489656 OR2F1Q13607 317 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 AANATQ16613 207 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 BRD3OSQ6XYD6 125 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 TEX29Q8N6K0 151 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 INO80EQ8NBZ0 244 aaPredicted RBP11.34□□□□□ -0.59
VPS26A-205ENST00000489656 SMIM8Q96KF7 97 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 AQP10Q96PS8 301 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 MFFQ9GZY8 342 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 MAGT1Q9H0U3 335 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 RBKSQ9H477 322 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 WSB1Q9Y6I7 421 aa11.34□□□□□ -0.59
VPS26A-205ENST00000489656 IGHV3OR16-10A0A075B7F0 116 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 A0A0D9SG52 128 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 A0A0U1RQK1 487 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 L7N2F9 121 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 NBR2O15453 112 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 SLC25A17O43808 307 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 FBP1P09467 338 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 FAM106CPP0CH98 169 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 PAX6P26367 422 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms