RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 OR4A5Q8NH83 315 aa13.5□□□□□ -0.25
MDC1-206ENST00000489540 SMIM4Q8WVI0 70 aa13.5□□□□□ -0.25
MDC1-206ENST00000489540 SRSF12Q8WXF0 261 aaKnown RBP13.5□□□□□ -0.25
MDC1-206ENST00000489540 PHB2Q99623 299 aa13.5□□□□□ -0.25
MDC1-206ENST00000489540 SPIN2AQ99865 258 aa13.5□□□□□ -0.25
MDC1-206ENST00000489540 SPIN2BQ9BPZ2 258 aa13.5□□□□□ -0.25
MDC1-206ENST00000489540 RSRP1Q9BUV0 290 aa13.5□□□□□ -0.25
MDC1-206ENST00000489540 TINAGL1Q9GZM7 467 aaPredicted RBP13.5□□□□□ -0.25
MDC1-206ENST00000489540 PLEKHA2Q9HB19 425 aa13.5□□□□□ -0.25
MDC1-206ENST00000489540 FABP12A6NFH5 140 aa13.49□□□□□ -0.25
MDC1-206ENST00000489540 BRI3O95415 125 aa13.49□□□□□ -0.25
MDC1-206ENST00000489540 RLN1P04808 185 aa13.49□□□□□ -0.25
MDC1-206ENST00000489540 F2RP25116 425 aa13.49□□□□□ -0.25
MDC1-206ENST00000489540 OR5T1Q8NG75 326 aa13.49□□□□□ -0.25
MDC1-206ENST00000489540 DGCR14Q96DF8 476 aaKnown RBP13.49□□□□□ -0.25
MDC1-206ENST00000489540 ZNF355PQ9NSJ1 428 aa13.49□□□□□ -0.25
MDC1-206ENST00000489540 BET1LQ9NYM9 111 aa13.49□□□□□ -0.25
MDC1-206ENST00000489540 I3L521 148 aa13.48□□□□□ -0.25
MDC1-206ENST00000489540 RAB3DO95716 219 aa13.48□□□□□ -0.25
MDC1-206ENST00000489540 POU2AF1Q16633 256 aa13.48□□□□□ -0.25
MDC1-206ENST00000489540 OXLD1Q5BKU9 147 aa13.48□□□□□ -0.25
MDC1-206ENST00000489540 KPRPQ5T749 579 aaPredicted RBP13.48□□□□□ -0.25
MDC1-206ENST00000489540 ASPHD1Q5U4P2 390 aa13.48□□□□□ -0.25
MDC1-206ENST00000489540 STEAP1BQ6NZ63 245 aa13.48□□□□□ -0.25
MDC1-206ENST00000489540 SSX9Q7RTT3 188 aa13.48□□□□□ -0.25
MDC1-206ENST00000489540 C1QL4Q86Z23 238 aa13.48□□□□□ -0.25
MDC1-206ENST00000489540 MS4A10Q96PG2 267 aa13.48□□□□□ -0.25
MDC1-206ENST00000489540 SOSTQ9BQB4 213 aa13.48□□□□□ -0.25
MDC1-206ENST00000489540 MCRIP2Q9BUT9 160 aaKnown RBP13.48□□□□□ -0.25
MDC1-206ENST00000489540 GNB4Q9HAV0 340 aa13.48□□□□□ -0.25
MDC1-206ENST00000489540 COMMD9Q9P000 198 aa13.48□□□□□ -0.25
MDC1-206ENST00000489540 PLXNB1O43157 2135 aa13.48□□□□□ -0.25
MDC1-206ENST00000489540 A6NHS1 94 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 MPPED1O15442 326 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 GSTZ1O43708 216 aaPredicted RBP13.47□□□□□ -0.25
MDC1-206ENST00000489540 TRGV3P03979 118 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 IGLL1P15814 213 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 TPPP2P59282 170 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 RPL8P62917 257 aaKnown RBP13.47□□□□□ -0.25
MDC1-206ENST00000489540 MEF2DQ14814 521 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 DEFB136Q30KP8 78 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 BEAN1Q3B7T3 259 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 PHLDA2Q53GA4 152 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 OR4A47Q6IF82 309 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 LHFPL1Q86WI0 220 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 OR11H1Q8NG94 326 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 OR1N2Q8NGR9 330 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 TERB2Q8NHR7 220 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 CASTOR1Q8WTX7 329 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 ZNF486Q96H40 463 aaPredicted RBP13.47□□□□□ -0.25
MDC1-206ENST00000489540 DUX3Q96PT4 197 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 GPR61Q9BZJ8 451 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 HRASLSQ9HDD0 168 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 FAM212BQ9NTI7 297 aaPredicted RBP13.47□□□□□ -0.25
MDC1-206ENST00000489540 NOTCH3Q9UM47 2321 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 A0A0G2JLM5 398 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 S100A5P33763 92 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 ERVK-16P61578 105 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 OR5B12Q96R08 314 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 NDUFA13Q9P0J0 144 aa13.47□□□□□ -0.25
MDC1-206ENST00000489540 S1PR2O95136 353 aa13.46□□□□□ -0.26
MDC1-206ENST00000489540 IL6RP08887 468 aaPredicted RBP13.46□□□□□ -0.26
MDC1-206ENST00000489540 FGF2P09038 288 aa13.46□□□□□ -0.26
MDC1-206ENST00000489540 OR9G9P0C7N8 305 aa13.46□□□□□ -0.26
MDC1-206ENST00000489540 PGAM2P15259 253 aa13.46□□□□□ -0.26
MDC1-206ENST00000489540 HLA-GP17693 338 aa13.46□□□□□ -0.26
MDC1-206ENST00000489540 LPAR6P43657 344 aa13.46□□□□□ -0.26
MDC1-206ENST00000489540 RPL27AP46776 148 aaKnown RBP13.46□□□□□ -0.26
MDC1-206ENST00000489540 FHL3Q13643 280 aa13.46□□□□□ -0.26
MDC1-206ENST00000489540 TBC1D26Q86UD7 250 aa13.46□□□□□ -0.26
MDC1-206ENST00000489540 SLC25A42Q86VD7 318 aa13.46□□□□□ -0.26
MDC1-206ENST00000489540 CADM3Q8N126 398 aa13.46□□□□□ -0.26
MDC1-206ENST00000489540 TTC9CQ8N5M4 171 aa13.46□□□□□ -0.26
MDC1-206ENST00000489540 DMBX1Q8NFW5 382 aa13.46□□□□□ -0.26
MDC1-206ENST00000489540 OR4D10Q8NGI6 311 aa13.46□□□□□ -0.26
MDC1-206ENST00000489540 ZFAND1Q8TCF1 268 aa13.46□□□□□ -0.26
MDC1-206ENST00000489540 DPF1Q92782 380 aa13.46□□□□□ -0.26
MDC1-206ENST00000489540 DISC1C4P0D8 188 aa13.45□□□□□ -0.26
MDC1-206ENST00000489540 UPK2O00526 184 aa13.45□□□□□ -0.26
MDC1-206ENST00000489540 LGALS1P09382 135 aaKnown RBP13.45□□□□□ -0.26
MDC1-206ENST00000489540 OR8U8P0C7N1 319 aa13.45□□□□□ -0.26
MDC1-206ENST00000489540 RAB25P57735 213 aa13.45□□□□□ -0.26
MDC1-206ENST00000489540 RND3P61587 244 aa13.45□□□□□ -0.26
MDC1-206ENST00000489540 ZNF616Q08AN1 781 aa13.45□□□□□ -0.26
MDC1-206ENST00000489540 SCGB2B2Q4G0G5 96 aa13.45□□□□□ -0.26
MDC1-206ENST00000489540 ZNF585BQ52M93 769 aa13.45□□□□□ -0.26
MDC1-206ENST00000489540 ADAD2Q8NCV1 583 aaKnown RBP13.45□□□□□ -0.26
MDC1-206ENST00000489540 USMG5Q96IX5 58 aa13.45□□□□□ -0.26
MDC1-206ENST00000489540 SLC2A9Q9NRM0 540 aa13.45□□□□□ -0.26
MDC1-206ENST00000489540 TMEM140Q9NV12 185 aa13.45□□□□□ -0.26
MDC1-206ENST00000489540 COA4Q9NYJ1 87 aa13.45□□□□□ -0.26
MDC1-206ENST00000489540 C13orf42A0A1B0GVH6 325 aa13.44□□□□□ -0.26
MDC1-206ENST00000489540 MARCH11A6NNE9 402 aa13.44□□□□□ -0.26
MDC1-206ENST00000489540 AKAIN1P0CW23 69 aa13.44□□□□□ -0.26
MDC1-206ENST00000489540 APELAP0DMC3 54 aa13.44□□□□□ -0.26
MDC1-206ENST00000489540 ECI1P42126 302 aa13.44□□□□□ -0.26
MDC1-206ENST00000489540 C10orf55Q5SWW7 151 aa13.44□□□□□ -0.26
MDC1-206ENST00000489540 FYTTD1Q96QD9 318 aaKnown RBP13.44□□□□□ -0.26
MDC1-206ENST00000489540 TEX22C9J3V5 150 aa13.43□□□□□ -0.26
MDC1-206ENST00000489540 IGHV3-11P01762 117 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms