RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 HSPE1P61604 102 aaKnown RBP5.23□□□□□ -1.57
SF3A3-208ENST00000489537 TFF3Q07654 80 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 ZNF816Q0VGE8 651 aaPredicted RBP5.23□□□□□ -1.57
SF3A3-208ENST00000489537 ZNF124Q15973 351 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 VMA21Q3ZAQ7 101 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 CT45A1Q5HYN5 189 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 CXorf66Q5JRM2 361 aaPredicted RBP5.23□□□□□ -1.57
SF3A3-208ENST00000489537 NCR3LG1Q68D85 454 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 LYG1Q8N1E2 194 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 SVBPQ8N300 66 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 KIR3DL3Q8N743 410 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 FAM216BQ8N7L0 139 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 TPRX1Q8N7U7 411 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 ZNF439Q8NDP4 499 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 BEND2Q8NDZ0 799 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 OR13D1Q8NGV5 346 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 OR10X1Q8NGY0 326 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 OR2G3Q8NGZ4 309 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 CT45A3Q8NHU0 189 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 LYPD6BQ8NI32 183 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 SUN5Q8TC36 379 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 H1FXQ92522 213 aaKnown RBP5.23□□□□□ -1.57
SF3A3-208ENST00000489537 FLYWCH2Q96CP2 140 aaKnown RBP5.23□□□□□ -1.57
SF3A3-208ENST00000489537 RHOVQ96L33 236 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 DCTN5Q9BTE1 182 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 TMEM147Q9BVK8 224 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 BET1LQ9NYM9 111 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 FOXA2Q9Y261 457 aaPredicted RBP5.23□□□□□ -1.57
SF3A3-208ENST00000489537 KLF2Q9Y5W3 355 aaPredicted RBP5.23□□□□□ -1.57
SF3A3-208ENST00000489537 U3KQE9 123 aa5.23□□□□□ -1.57
SF3A3-208ENST00000489537 POLQO75417 2590 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 ZNF469Q96JG9 3925 aaPredicted RBP5.22□□□□□ -1.57
SF3A3-208ENST00000489537 SAA2-SAA4A0A096LPE2 208 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 IGHV3-43A0A0B4J1X8 118 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 TRAV1-1A0A0B4J248 108 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 C17orf98A8MV24 154 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 INS-IGF2F8WCM5 200 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 J3QR06 171 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 FBXO24O75426 580 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 SNAPINO95295 136 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 IGKV1-39P01597 117 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 IGHV2-70P01814 119 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 IGKV1D-39P04432 117 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 FAM157CP0CG43 387 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 SAA2P0DJI9 122 aaPredicted RBP5.22□□□□□ -1.57
SF3A3-208ENST00000489537 IGHV3-43DP0DP04 118 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 G6PCP35575 357 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 NHLH2Q02577 135 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 PMS2P11Q13670 270 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 LRRC75BQ2VPJ9 315 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 TOR2AQ5JU69 321 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 SPANXN5Q5MJ07 72 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 TMEM200BQ69YZ2 307 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 CCDC144NLQ6NUI1 221 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 TMEM14EPQ6UXP3 125 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 ZNF833PQ6ZTB9 187 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 DDB2Q92466 427 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 LHX4Q969G2 390 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 CLEC7AQ9BXN2 247 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 MAGT1Q9H0U3 335 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 TMEM133Q9H2Q1 129 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 RBKSQ9H477 322 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 BARX1Q9HBU1 254 aaPredicted RBP5.22□□□□□ -1.57
SF3A3-208ENST00000489537 HEYLQ9NQ87 328 aaPredicted RBP5.22□□□□□ -1.57
SF3A3-208ENST00000489537 SLC35D1Q9NTN3 355 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 UQCC1Q9NVA1 299 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 KPTNQ9Y664 436 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 TACC2O95359 2948 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 PKDREJQ9NTG1 2253 aa5.22□□□□□ -1.57
SF3A3-208ENST00000489537 PPIAL4CA0A0B4J2A2 164 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 IGSF23A1L1A6 192 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 C15orf61A6NNL5 157 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 LINC00473A8K010 186 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 C19orf84I3L1E1 186 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 NDUFS8O00217 210 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 CYB5BO43169 146 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 RAMP3O60896 148 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 CRYZL1O95825 349 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 MT-CO2P00403 227 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 IFNA10P01566 189 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 PPIAL4GP0DN37 164 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 IGHV1-8P0DP01 117 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 LOXP28300 417 aaPredicted RBP5.21□□□□□ -1.58
SF3A3-208ENST00000489537 SNCAP37840 140 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 HOXA1P49639 335 aaPredicted RBP5.21□□□□□ -1.58
SF3A3-208ENST00000489537 DYNLT3P51808 116 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 EFNA4P52798 201 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 KRTAP10-9P60411 292 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 DLK1P80370 383 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 ERHP84090 104 aaKnown RBP5.21□□□□□ -1.58
SF3A3-208ENST00000489537 SLC38A11Q08AI6 406 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 ZNF616Q08AN1 781 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 CLINT1Q14677 625 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 SSX2Q16385 188 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 MLANAQ16655 118 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 LTC4SQ16873 150 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 TMEM177Q53S58 311 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 ETFRF1Q6IPR1 90 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 BTNL3Q6UXE8 466 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 RBMS3Q6XE24 437 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms