RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 J3QRK9 145 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 KBTBD11O94819 623 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 HLA-AP01891 365 aaKnown RBP7.04□□□□□ -1.28
SNX17-207ENST00000489402 CBLN1P23435 193 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 MAS1LP35410 378 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 RPL27AP46776 148 aaKnown RBP7.04□□□□□ -1.28
SNX17-207ENST00000489402 OR10A3P58181 314 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 SSX1Q16384 188 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 FAM106AQ4KMX7 169 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 OR2B11Q5JQS5 317 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 ZNF57Q68EA5 555 aaPredicted RBP7.04□□□□□ -1.28
SNX17-207ENST00000489402 OR4A47Q6IF82 309 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 CLEC19AQ6UXS0 136 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 GPHB5Q86YW7 130 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 OR4S2Q8NH73 311 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 TCTEX1D2Q8WW35 142 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 EEF1AKMT3Q96AZ1 226 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 FYTTD1Q96QD9 318 aaKnown RBP7.04□□□□□ -1.28
SNX17-207ENST00000489402 OR2A7Q96R45 310 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 GGTLC1Q9BX51 225 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 ATG5Q9H1Y0 275 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 DUSP21Q9H596 190 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 ELF5Q9UKW6 265 aaPredicted RBP7.04□□□□□ -1.28
SNX17-207ENST00000489402 RBMX2Q9Y388 322 aaKnown RBP7.04□□□□□ -1.28
SNX17-207ENST00000489402 OR2W1Q9Y3N9 320 aa7.04□□□□□ -1.28
SNX17-207ENST00000489402 LOC102724200A0A096LPH7 203 aaPredicted RBP7.03□□□□□ -1.28
SNX17-207ENST00000489402 A8MWP6 167 aa7.03□□□□□ -1.28
SNX17-207ENST00000489402 TEX22C9J3V5 150 aa7.03□□□□□ -1.28
SNX17-207ENST00000489402 ATP6V1G2O95670 118 aa7.03□□□□□ -1.28
SNX17-207ENST00000489402 IGHV3-23P01764 117 aa7.03□□□□□ -1.28
SNX17-207ENST00000489402 DEFA4P12838 97 aa7.03□□□□□ -1.28
SNX17-207ENST00000489402 HIST1H1BP16401 226 aaKnown RBP7.03□□□□□ -1.28
SNX17-207ENST00000489402 RAB3BP20337 219 aa7.03□□□□□ -1.28
SNX17-207ENST00000489402 NFYAP23511 347 aaPredicted RBP7.03□□□□□ -1.28
SNX17-207ENST00000489402 CRHBPP24387 322 aa7.03□□□□□ -1.28
SNX17-207ENST00000489402 PRSS48Q7RTY5 328 aa7.03□□□□□ -1.28
SNX17-207ENST00000489402 TMEM61Q8N0U2 210 aa7.03□□□□□ -1.28
SNX17-207ENST00000489402 VKORC1L1Q8N0U8 176 aa7.03□□□□□ -1.28
SNX17-207ENST00000489402 TMEM167AQ8TBQ9 72 aa7.03□□□□□ -1.28
SNX17-207ENST00000489402 CACNG8Q8WXS5 425 aa7.03□□□□□ -1.28
SNX17-207ENST00000489402 CCDC140Q96MF4 163 aa7.03□□□□□ -1.28
SNX17-207ENST00000489402 HSD17B10Q99714 261 aaKnown RBP7.03□□□□□ -1.28
SNX17-207ENST00000489402 ST6GALNAC5Q9BVH7 336 aa7.03□□□□□ -1.28
SNX17-207ENST00000489402 SLC2A9Q9NRM0 540 aa7.03□□□□□ -1.28
SNX17-207ENST00000489402 DMRT1Q9Y5R6 373 aa7.03□□□□□ -1.28
SNX17-207ENST00000489402 S4R3C0 116 aa7.03□□□□□ -1.28
SNX17-207ENST00000489402 TRBV7-1A0A0A6YYK4 115 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 TMEM213A2RRL7 107 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 CXorf65A6NEN9 183 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 SCAF4O95104 1147 aaKnown RBP7.02□□□□□ -1.29
SNX17-207ENST00000489402 NDUFB8O95169 186 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 HRASP01112 189 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 HLA-DQB1P01920 261 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 ZNF735P0CB33 412 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 PSMB6P28072 239 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 AQP4P55087 323 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 RPL30P62888 115 aaKnown RBP7.02□□□□□ -1.29
SNX17-207ENST00000489402 CDNFQ49AH0 187 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 RBPMS2Q6ZRY4 209 aaKnown RBP7.02□□□□□ -1.29
SNX17-207ENST00000489402 ZNF367Q7RTV3 350 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 PUSL1Q8N0Z8 303 aaKnown RBP7.02□□□□□ -1.29
SNX17-207ENST00000489402 UXS1Q8NBZ7 420 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 LINC00476Q8WZB0 136 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 CXorf58Q96LI9 332 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 FANCD2OSQ96PS1 177 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 DCSTAMPQ9H295 470 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 MLXQ9UH92 298 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 SPATA2Q9UM82 520 aa7.02□□□□□ -1.29
SNX17-207ENST00000489402 TRAV25A0A0B4J276 109 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 NUPR2A6NF83 97 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 SCGNO76038 276 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 LY6G6CO95867 125 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 CRYGCP07315 174 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 IL6RP08887 468 aaPredicted RBP7.01□□□□□ -1.29
SNX17-207ENST00000489402 AREGP15514 252 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 GNG2P59768 71 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 RPL8P62917 257 aaKnown RBP7.01□□□□□ -1.29
SNX17-207ENST00000489402 PMS2P11Q13670 270 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 TBCEQ15813 527 aaPredicted RBP7.01□□□□□ -1.29
SNX17-207ENST00000489402 TM4SF20Q53R12 229 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 HACD4Q5VWC8 232 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 CNIH2Q6PI25 160 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 BTNL8Q6UX41 500 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 ZNF66Q6ZN08 573 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 SSX9Q7RTT3 188 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 SLC38A6Q8IZM9 456 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 OR1L6Q8NGR2 347 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 NRG4Q8WWG1 115 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 MARC2Q969Z3 335 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 OVOL2Q9BRP0 275 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 AIFM2Q9BRQ8 373 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 NDUFB11Q9NX14 153 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 TAS2R8Q9NYW2 309 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 BLOC1S6Q9UL45 172 aa7.01□□□□□ -1.29
SNX17-207ENST00000489402 VPS13DQ5THJ4 4388 aa7□□□□□ -1.29
SNX17-207ENST00000489402 IGKV1D-13A0A0B4J2D9 117 aa7□□□□□ -1.29
SNX17-207ENST00000489402 A0A1B0GW64 132 aa7□□□□□ -1.29
SNX17-207ENST00000489402 TRDV1A0A1B0GX56 115 aa7□□□□□ -1.29
SNX17-207ENST00000489402 E7EUB6 86 aa7□□□□□ -1.29
SNX17-207ENST00000489402 IGLV2-14P01704 120 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms