RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 AKIP1Q9NQ31 210 aa19.16■□□□□ 0.66
HMGN1-217ENST00000489072 TRBV9A0A0B4J1U6 114 aa19.15■□□□□ 0.66
HMGN1-217ENST00000489072 GABARAPO95166 117 aa19.15■□□□□ 0.66
HMGN1-217ENST00000489072 LY86O95711 162 aa19.15■□□□□ 0.66
HMGN1-217ENST00000489072 HRASP01112 189 aa19.15■□□□□ 0.66
HMGN1-217ENST00000489072 ZP3P21754 424 aa19.15■□□□□ 0.66
HMGN1-217ENST00000489072 GNRHRP30968 328 aa19.15■□□□□ 0.66
HMGN1-217ENST00000489072 HERV-K104P61576 105 aa19.15■□□□□ 0.66
HMGN1-217ENST00000489072 RHOGP84095 191 aa19.15■□□□□ 0.66
HMGN1-217ENST00000489072 ANKRD13BQ86YJ7 626 aa19.15■□□□□ 0.66
HMGN1-217ENST00000489072 LYSMD2Q8IV50 215 aa19.15■□□□□ 0.66
HMGN1-217ENST00000489072 CMTM3Q96MX0 182 aa19.15■□□□□ 0.66
HMGN1-217ENST00000489072 ZNF2Q9BSG1 426 aaPredicted RBP19.15■□□□□ 0.66
HMGN1-217ENST00000489072 PEF1Q9UBV8 284 aaKnown RBP19.15■□□□□ 0.66
HMGN1-217ENST00000489072 RBFOX2O43251 390 aaKnown RBP eCLIP19.14■□□□□ 0.651e-18■□□□□ 8.3
HMGN1-217ENST00000489072 HPGDSO60760 199 aa19.14■□□□□ 0.65
HMGN1-217ENST00000489072 SPNP16150 400 aa19.14■□□□□ 0.65
HMGN1-217ENST00000489072 ELK1P19419 428 aa19.14■□□□□ 0.65
HMGN1-217ENST00000489072 RPL27AP46776 148 aaKnown RBP19.14■□□□□ 0.65
HMGN1-217ENST00000489072 KLF5Q13887 457 aaPredicted RBP19.14■□□□□ 0.65
HMGN1-217ENST00000489072 C19orf35Q6ZS72 473 aa19.14■□□□□ 0.65
HMGN1-217ENST00000489072 OR5H2Q8NGV7 314 aa19.14■□□□□ 0.65
HMGN1-217ENST00000489072 OR51H1Q8NH63 302 aa19.14■□□□□ 0.65
HMGN1-217ENST00000489072 GPX8Q8TED1 209 aa19.14■□□□□ 0.65
HMGN1-217ENST00000489072 MOB3AQ96BX8 217 aa19.14■□□□□ 0.65
HMGN1-217ENST00000489072 ADAM30Q9UKF2 790 aa19.14■□□□□ 0.65
HMGN1-217ENST00000489072 MYOD1P15172 320 aa19.13■□□□□ 0.65
HMGN1-217ENST00000489072 MAS1LP35410 378 aa19.13■□□□□ 0.65
HMGN1-217ENST00000489072 RORCP51449 518 aa19.13■□□□□ 0.65
HMGN1-217ENST00000489072 TAS2R46P59540 309 aa19.13■□□□□ 0.65
HMGN1-217ENST00000489072 CATR1Q13166 79 aa19.13■□□□□ 0.65
HMGN1-217ENST00000489072 OR4A47Q6IF82 309 aa19.13■□□□□ 0.65
HMGN1-217ENST00000489072 HAPLN4Q86UW8 402 aa19.13■□□□□ 0.65
HMGN1-217ENST00000489072 OR4C12Q96R67 309 aa19.13■□□□□ 0.65
HMGN1-217ENST00000489072 BET1LQ9NYM9 111 aa19.13■□□□□ 0.65
HMGN1-217ENST00000489072 ZNF735P0CB33 412 aa19.12■□□□□ 0.65
HMGN1-217ENST00000489072 HLA-DMAP28067 261 aa19.12■□□□□ 0.65
HMGN1-217ENST00000489072 HRH1P35367 487 aa19.12■□□□□ 0.65
HMGN1-217ENST00000489072 AADACL3Q5VUY0 350 aa19.12■□□□□ 0.65
HMGN1-217ENST00000489072 GPR107Q5VW38 600 aa19.12■□□□□ 0.65
HMGN1-217ENST00000489072 SNX29P2Q8IUI4 249 aa19.12■□□□□ 0.65
HMGN1-217ENST00000489072 FYTTD1Q96QD9 318 aaKnown RBP19.12■□□□□ 0.65
HMGN1-217ENST00000489072 FXYD6Q9H0Q3 95 aa19.12■□□□□ 0.65
HMGN1-217ENST00000489072 SMIM31A0A1B0GVY4 71 aa19.11■□□□□ 0.65
HMGN1-217ENST00000489072 FAM223BA6NKX1 122 aa19.11■□□□□ 0.65
HMGN1-217ENST00000489072 HPRT1P00492 218 aa19.11■□□□□ 0.65
HMGN1-217ENST00000489072 RPL8P62917 257 aaKnown RBP19.11■□□□□ 0.65
HMGN1-217ENST00000489072 EXOSC2Q13868 293 aaKnown RBP19.11■□□□□ 0.65
HMGN1-217ENST00000489072 VAX1Q5SQQ9 334 aa19.11■□□□□ 0.65
HMGN1-217ENST00000489072 FAM223AQ8IWN6 122 aa19.11■□□□□ 0.65
HMGN1-217ENST00000489072 OR6Q1Q8NGQ2 317 aa19.11■□□□□ 0.65
HMGN1-217ENST00000489072 ELOVL1Q9BW60 279 aa19.11■□□□□ 0.65
HMGN1-217ENST00000489072 SLC2A9Q9NRM0 540 aa19.11■□□□□ 0.65
HMGN1-217ENST00000489072 ZNF257Q9Y2Q1 563 aa19.11■□□□□ 0.65
HMGN1-217ENST00000489072 TRAV3A0A0B4J244 114 aa19.1■□□□□ 0.65
HMGN1-217ENST00000489072 CGB1A6NKQ9 187 aa19.1■□□□□ 0.65
HMGN1-217ENST00000489072 NPIPB5A8MRT5 1133 aa19.1■□□□□ 0.65
HMGN1-217ENST00000489072 S1PR2O95136 353 aa19.1■□□□□ 0.65
HMGN1-217ENST00000489072 AREGP15514 252 aa19.1■□□□□ 0.65
HMGN1-217ENST00000489072 HLA-GP17693 338 aa19.1■□□□□ 0.65
HMGN1-217ENST00000489072 SYNJ2BPP57105 145 aa19.1■□□□□ 0.65
HMGN1-217ENST00000489072 TAS2R31P59538 309 aa19.1■□□□□ 0.65
HMGN1-217ENST00000489072 ATP5G2Q06055 141 aa19.1■□□□□ 0.65
HMGN1-217ENST00000489072 POU2AF1Q16633 256 aa19.1■□□□□ 0.65
HMGN1-217ENST00000489072 IL34Q6ZMJ4 242 aa19.1■□□□□ 0.65
HMGN1-217ENST00000489072 SLC25A42Q86VD7 318 aa19.1■□□□□ 0.65
HMGN1-217ENST00000489072 OR4A5Q8NH83 315 aa19.1■□□□□ 0.65
HMGN1-217ENST00000489072 SCPEP1Q9HB40 452 aa19.1■□□□□ 0.65
HMGN1-217ENST00000489072 OR2J3O76001 311 aa19.09■□□□□ 0.65
HMGN1-217ENST00000489072 RLN1P04808 185 aa19.09■□□□□ 0.65
HMGN1-217ENST00000489072 NQO2P16083 231 aa19.09■□□□□ 0.65
HMGN1-217ENST00000489072 NECAP1Q8NC96 275 aa19.09■□□□□ 0.65
HMGN1-217ENST00000489072 BORCS5Q969J3 196 aa19.09■□□□□ 0.65
HMGN1-217ENST00000489072 AIFM2Q9BRQ8 373 aa19.09■□□□□ 0.65
HMGN1-217ENST00000489072 RSRP1Q9BUV0 290 aa19.09■□□□□ 0.65
HMGN1-217ENST00000489072 MRPS26Q9BYN8 205 aaKnown RBP19.09■□□□□ 0.65
HMGN1-217ENST00000489072 HRASLSQ9HDD0 168 aa19.09■□□□□ 0.65
HMGN1-217ENST00000489072 TENM3Q9P273 2699 aa19.09■□□□□ 0.65
HMGN1-217ENST00000489072 STAB2Q8WWQ8 2551 aa19.08■□□□□ 0.65
HMGN1-217ENST00000489072 BMPR1BO00238 502 aa19.08■□□□□ 0.64
HMGN1-217ENST00000489072 PGLYRP1O75594 196 aaPredicted RBP19.08■□□□□ 0.64
HMGN1-217ENST00000489072 IGLV1-51P01701 117 aa19.08■□□□□ 0.64
HMGN1-217ENST00000489072 GP9P14770 177 aa19.08■□□□□ 0.64
HMGN1-217ENST00000489072 ALDH3B2P48448 385 aa19.08■□□□□ 0.64
HMGN1-217ENST00000489072 OR9G4Q8NGQ1 327 aa19.08■□□□□ 0.64
HMGN1-217ENST00000489072 OR6F1Q8NGZ6 308 aa19.08■□□□□ 0.64
HMGN1-217ENST00000489072 CD300LFQ8TDQ1 290 aa19.08■□□□□ 0.64
HMGN1-217ENST00000489072 PLEKHA2Q9HB19 425 aa19.08■□□□□ 0.64
HMGN1-217ENST00000489072 DPPA5A6NC42 116 aa19.07■□□□□ 0.64
HMGN1-217ENST00000489072 UPK2O00526 184 aa19.07■□□□□ 0.64
HMGN1-217ENST00000489072 CRYGCP07315 174 aa19.07■□□□□ 0.64
HMGN1-217ENST00000489072 ZNF182P17025 639 aaPredicted RBP19.07■□□□□ 0.64
HMGN1-217ENST00000489072 OR2B8PP59922 312 aa19.07■□□□□ 0.64
HMGN1-217ENST00000489072 RPEL1Q2QD12 228 aa19.07■□□□□ 0.64
HMGN1-217ENST00000489072 C15orf32Q32M92 178 aa19.07■□□□□ 0.64
HMGN1-217ENST00000489072 MZT2AQ6P582 158 aa19.07■□□□□ 0.64
HMGN1-217ENST00000489072 FANCD2OSQ96PS1 177 aa19.07■□□□□ 0.64
HMGN1-217ENST00000489072 TMEM140Q9NV12 185 aa19.07■□□□□ 0.64
HMGN1-217ENST00000489072 SMAD5-AS1Q9Y6J3 95 aa19.07■□□□□ 0.64
HMGN1-217ENST00000489072 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms