RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 BRS3P32247 399 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 MEF2DQ14814 521 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 AANATQ16613 207 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 C2orf68Q2NKX9 166 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 LRRC75BQ2VPJ9 315 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 STEAP1BQ6NZ63 245 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 C9orf47Q6ZRZ4 202 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 LHFPL4Q7Z7J7 247 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 C8orf31Q8N9H6 132 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 OR2AK2Q8NG84 335 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 OR10V1Q8NGI7 309 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 OR4A4PQ8NGN8 299 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 LEAP2Q969E1 77 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 MED28Q9H204 178 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 GPN1Q9HCN4 374 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 IFT46Q9NQC8 304 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 ZNRD1Q9P1U0 126 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 SCP2D1Q9UJQ7 156 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 PSG11Q9UQ72 335 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 KCNK7Q9Y2U2 307 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 HILPDAQ9Y5L2 63 aa6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 SOX21Q9Y651 276 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC12-221ENST00000489032 TRAV6A0A075B6T7 132 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 hDV102S1A0JD36 115 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 C7orf66A4D0T2 115 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 TMEM235A6NFC5 223 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 DISC1C4P0D8 188 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 FABP7O15540 132 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 YPEL1O60688 119 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 RAB3DO95716 219 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 IGLV1-47P01700 117 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 CTXN2P0C2S0 81 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 PTHLHP12272 177 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 IER3P46695 156 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 RAB7AP51149 207 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 CCR6P51684 374 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 RRAS2P62070 204 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 UBA52P62987 128 aaKnown RBP6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 SLC9A3R2Q15599 337 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 ZFP69Q49AA0 526 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 MORN2Q502X0 79 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 ACTBL2Q562R1 376 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 CXorf66Q5JRM2 361 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 LINC00311Q8N616 119 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 ZDHHC22Q8N966 263 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 OR4P4Q8NGL7 312 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 OR6F1Q8NGZ6 308 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 OR10J5Q8NHC4 309 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 NUDCD2Q8WVJ2 157 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 CAPSLQ8WWF8 208 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 TOMM40LQ969M1 308 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 YPEL2Q96QA6 119 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 SSX3Q99909 188 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 SLC25A21Q9BQT8 299 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 GINS4Q9BRT9 223 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 ST6GALNAC5Q9BVH7 336 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 C20orf85Q9H1P6 137 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 RAB18Q9NP72 206 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 TNFRSF19Q9NS68 423 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 ZNF230Q9UIE0 474 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 PITPNC1Q9UKF7 332 aa6.42□□□□□ -1.38
TRAPPC12-221ENST00000489032 A0A1W2PPE3 182 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 H3BUX3 64 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 BET1O15155 118 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 TXNL1O43396 289 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 DIRAS3O95661 229 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 IGHV4-59P01825 116 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 CD74P04233 296 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 CD3DP04234 171 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 GAPDHP04406 335 aaKnown RBP6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 IFNA6P05013 189 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 IL5P05113 134 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 SCTP09683 121 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 PPP1CCP36873 323 aaKnown RBP6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 CEACAM6P40199 344 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 ARPC4P59998 168 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 RNASE10Q5GAN6 216 aaKnown RBP6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 LY6G6FQ5SQ64 297 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 TPTE2P1Q5T6R2 138 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 GLDNQ6ZMI3 551 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 Q6ZS49 121 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 SLC25A48Q6ZT89 311 aaKnown RBP6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 TCTE3Q8IZS6 198 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 OR8H3Q8N146 312 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 LYG1Q8N1E2 194 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 OR4C16Q8NGL9 310 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 C17orf50Q8WW18 174 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 RRNAD1Q96FB5 475 aaKnown RBP6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 DUX5Q96PT3 197 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 PRRT1Q99946 306 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 OR51J1Q9H342 316 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 GHITMQ9H3K2 345 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 ESM1Q9NQ30 184 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 PIPOXQ9P0Z9 390 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 VPREB3Q9UKI3 123 aa6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 RBM7Q9Y580 266 aaKnown RBP6.41□□□□□ -1.38
TRAPPC12-221ENST00000489032 A0A0B4J293 547 aa6.4□□□□□ -1.38
TRAPPC12-221ENST00000489032 SNRPGP15A8MWD9 76 aa6.4□□□□□ -1.38
TRAPPC12-221ENST00000489032 VCYO14598 125 aa6.4□□□□□ -1.38
TRAPPC12-221ENST00000489032 ITGB1BP1O14713 200 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms