RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, human

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-231	ENST00000488905	HACD4	Q5VWC8	232 aa		13.88	□□□□□ -0.19
HDAC6-231	ENST00000488905	C22orf42	Q6IC83	251 aa		13.88	□□□□□ -0.19
HDAC6-231	ENST00000488905	NUDCD2	Q8WVJ2	157 aa		13.88	□□□□□ -0.19
HDAC6-231	ENST00000488905	TCTEX1D2	Q8WW35	142 aa		13.88	□□□□□ -0.19
HDAC6-231	ENST00000488905	OR51E2	Q9H255	320 aa		13.88	□□□□□ -0.19
HDAC6-231	ENST00000488905	TECR	Q9NZ01	308 aa	Known RBP	13.88	□□□□□ -0.19
HDAC6-231	ENST00000488905	SMIM30	A4D0T7	59 aa		13.87	□□□□□ -0.19
HDAC6-231	ENST00000488905	OR11H12	B2RN74	326 aa		13.87	□□□□□ -0.19
HDAC6-231	ENST00000488905	LGALS9	O00182	355 aa		13.87	□□□□□ -0.19
HDAC6-231	ENST00000488905	GAL	P22466	123 aa		13.87	□□□□□ -0.19
HDAC6-231	ENST00000488905	KIR2DS2	P43631	304 aa		13.87	□□□□□ -0.19
HDAC6-231	ENST00000488905	RPL27A	P46776	148 aa	Known RBP	13.87	□□□□□ -0.19
HDAC6-231	ENST00000488905	GUCA2B	Q16661	112 aa		13.87	□□□□□ -0.19
HDAC6-231	ENST00000488905	PUSL1	Q8N0Z8	303 aa	Known RBP	13.87	□□□□□ -0.19
HDAC6-231	ENST00000488905	WDR89	Q96FK6	387 aa	Predicted RBP	13.87	□□□□□ -0.19
HDAC6-231	ENST00000488905	CCDC140	Q96MF4	163 aa		13.87	□□□□□ -0.19
HDAC6-231	ENST00000488905	OR2A7	Q96R45	310 aa		13.87	□□□□□ -0.19
HDAC6-231	ENST00000488905	HSD17B10	Q99714	261 aa	Known RBP	13.87	□□□□□ -0.19
HDAC6-231	ENST00000488905	DCSTAMP	Q9H295	470 aa		13.87	□□□□□ -0.19
HDAC6-231	ENST00000488905	FBXL7	Q9UJT9	491 aa		13.87	□□□□□ -0.19
HDAC6-231	ENST00000488905	DPPA5	A6NC42	116 aa		13.86	□□□□□ -0.19
HDAC6-231	ENST00000488905	TMEM235	A6NFC5	223 aa		13.86	□□□□□ -0.19
HDAC6-231	ENST00000488905	OR2C1	O95371	312 aa		13.86	□□□□□ -0.19
HDAC6-231	ENST00000488905	IL6R	P08887	468 aa	Predicted RBP	13.86	□□□□□ -0.19
HDAC6-231	ENST00000488905	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.86	□□□□□ -0.19
HDAC6-231	ENST00000488905	CNIH2	Q6PI25	160 aa		13.86	□□□□□ -0.19
HDAC6-231	ENST00000488905	TMEM167A	Q8TBQ9	72 aa		13.86	□□□□□ -0.19
HDAC6-231	ENST00000488905	CACNG8	Q8WXS5	425 aa		13.86	□□□□□ -0.19
HDAC6-231	ENST00000488905	CNBD2	Q96M20	576 aa		13.86	□□□□□ -0.19
HDAC6-231	ENST00000488905	FYTTD1	Q96QD9	318 aa	Known RBP	13.86	□□□□□ -0.19
HDAC6-231	ENST00000488905	SPATA2	Q9UM82	520 aa		13.86	□□□□□ -0.19
HDAC6-231	ENST00000488905		A0A1B0GW64	132 aa		13.85	□□□□□ -0.19
HDAC6-231	ENST00000488905		E7EUB6	86 aa		13.85	□□□□□ -0.19
HDAC6-231	ENST00000488905	IGHV3-23	P01764	117 aa		13.85	□□□□□ -0.19
HDAC6-231	ENST00000488905	ZNF735	P0CB33	412 aa		13.85	□□□□□ -0.19
HDAC6-231	ENST00000488905	MAS1L	P35410	378 aa		13.85	□□□□□ -0.19
HDAC6-231	ENST00000488905	ARL3	P36405	182 aa		13.85	□□□□□ -0.19
HDAC6-231	ENST00000488905	IZUMO2	Q6UXV1	221 aa		13.85	□□□□□ -0.19
HDAC6-231	ENST00000488905	GPHB5	Q86YW7	130 aa		13.85	□□□□□ -0.19
HDAC6-231	ENST00000488905	FANCD2OS	Q96PS1	177 aa		13.85	□□□□□ -0.19
HDAC6-231	ENST00000488905	VCX3B	Q9H321	246 aa		13.85	□□□□□ -0.19
HDAC6-231	ENST00000488905	SLC2A9	Q9NRM0	540 aa		13.85	□□□□□ -0.19
HDAC6-231	ENST00000488905	TAS2R8	Q9NYW2	309 aa		13.85	□□□□□ -0.19
HDAC6-231	ENST00000488905	NOTO	A8MTQ0	251 aa		13.84	□□□□□ -0.19
HDAC6-231	ENST00000488905		A8MWP6	167 aa		13.84	□□□□□ -0.19
HDAC6-231	ENST00000488905	SCGN	O76038	276 aa		13.84	□□□□□ -0.19
HDAC6-231	ENST00000488905	NDUFB8	O95169	186 aa		13.84	□□□□□ -0.19
HDAC6-231	ENST00000488905	CRYGC	P07315	174 aa		13.84	□□□□□ -0.19
HDAC6-231	ENST00000488905	AREG	P15514	252 aa		13.84	□□□□□ -0.19
HDAC6-231	ENST00000488905	CBLN1	P23435	193 aa		13.84	□□□□□ -0.19
HDAC6-231	ENST00000488905	HSPA13	P48723	471 aa		13.84	□□□□□ -0.19
HDAC6-231	ENST00000488905	BRWD1-AS2	P59051	145 aa		13.84	□□□□□ -0.19
HDAC6-231	ENST00000488905	GNG2	P59768	71 aa		13.84	□□□□□ -0.19
HDAC6-231	ENST00000488905	CLEC19A	Q6UXS0	136 aa		13.84	□□□□□ -0.19
HDAC6-231	ENST00000488905	SLC16A13	Q7RTY0	426 aa		13.84	□□□□□ -0.19
HDAC6-231	ENST00000488905	TMEM61	Q8N0U2	210 aa		13.84	□□□□□ -0.19
HDAC6-231	ENST00000488905	ANXA10	Q9UJ72	324 aa		13.84	□□□□□ -0.19
HDAC6-231	ENST00000488905		S4R3C0	116 aa		13.84	□□□□□ -0.19
HDAC6-231	ENST00000488905	FRAS1	Q86XX4	4008 aa		13.83	□□□□□ -0.19
HDAC6-231	ENST00000488905	TMEM213	A2RRL7	107 aa		13.83	□□□□□ -0.2
HDAC6-231	ENST00000488905	SSX5	O60225	188 aa		13.83	□□□□□ -0.2
HDAC6-231	ENST00000488905	DHFR	P00374	187 aa		13.83	□□□□□ -0.2
HDAC6-231	ENST00000488905	PSMB6	P28072	239 aa		13.83	□□□□□ -0.2
HDAC6-231	ENST00000488905	ZNF66	Q6ZN08	573 aa		13.83	□□□□□ -0.2
HDAC6-231	ENST00000488905	MFSD4A	Q8N468	514 aa		13.83	□□□□□ -0.2
HDAC6-231	ENST00000488905	EEF1AKMT3	Q96AZ1	226 aa		13.83	□□□□□ -0.2
HDAC6-231	ENST00000488905	SELENOK	Q9Y6D0	94 aa		13.83	□□□□□ -0.2
HDAC6-231	ENST00000488905	HRAS	P01112	189 aa		13.82	□□□□□ -0.2
HDAC6-231	ENST00000488905	CTRB1	P17538	263 aa		13.82	□□□□□ -0.2
HDAC6-231	ENST00000488905	FGF9	P31371	208 aa	Predicted RBP	13.82	□□□□□ -0.2
HDAC6-231	ENST00000488905	GABARAPL2	P60520	117 aa		13.82	□□□□□ -0.2
HDAC6-231	ENST00000488905	RPL8	P62917	257 aa	Known RBP	13.82	□□□□□ -0.2
HDAC6-231	ENST00000488905	KLK9	Q2XQG4	91 aa		13.82	□□□□□ -0.2
HDAC6-231	ENST00000488905	ZNF57	Q68EA5	555 aa	Predicted RBP	13.82	□□□□□ -0.2
HDAC6-231	ENST00000488905	CTRB2	Q6GPI1	263 aa		13.82	□□□□□ -0.2
HDAC6-231	ENST00000488905	SSX9	Q7RTT3	188 aa		13.82	□□□□□ -0.2
HDAC6-231	ENST00000488905	LGALS14	Q8TCE9	139 aa		13.82	□□□□□ -0.2
HDAC6-231	ENST00000488905	GPHA2	Q96T91	129 aa		13.82	□□□□□ -0.2
HDAC6-231	ENST00000488905	TXNL4B	Q9NX01	149 aa	Known RBP	13.82	□□□□□ -0.2
HDAC6-231	ENST00000488905	MLX	Q9UH92	298 aa		13.82	□□□□□ -0.2
HDAC6-231	ENST00000488905	DAPK2	Q9UIK4	370 aa		13.82	□□□□□ -0.2
HDAC6-231	ENST00000488905	KLK9	Q9UKQ9	250 aa		13.82	□□□□□ -0.2
HDAC6-231	ENST00000488905	IGLV11-55	A0A075B6I3	123 aa		13.81	□□□□□ -0.2
HDAC6-231	ENST00000488905	REG1A	P05451	166 aa		13.81	□□□□□ -0.2
HDAC6-231	ENST00000488905	HIST1H1B	P16401	226 aa	Known RBP	13.81	□□□□□ -0.2
HDAC6-231	ENST00000488905	HLA-G	P17693	338 aa		13.81	□□□□□ -0.2
HDAC6-231	ENST00000488905	TIMM50	Q3ZCQ8	353 aa		13.81	□□□□□ -0.2
HDAC6-231	ENST00000488905	FAM106A	Q4KMX7	169 aa		13.81	□□□□□ -0.2
HDAC6-231	ENST00000488905	UBE2U	Q5VVX9	321 aa		13.81	□□□□□ -0.2
HDAC6-231	ENST00000488905	RHBDL2	Q9NX52	303 aa		13.81	□□□□□ -0.2
HDAC6-231	ENST00000488905	BET1L	Q9NYM9	111 aa		13.81	□□□□□ -0.2
HDAC6-231	ENST00000488905	KMT2A	Q03164	3969 aa		13.81	□□□□□ -0.2
HDAC6-231	ENST00000488905	ZNF320	A2RRD8	509 aa		13.8	□□□□□ -0.2
HDAC6-231	ENST00000488905	MFSD2B	A6NFX1	497 aa		13.8	□□□□□ -0.2
HDAC6-231	ENST00000488905	CGB1	A6NKQ9	187 aa		13.8	□□□□□ -0.2
HDAC6-231	ENST00000488905	TNFSF12	O43508	249 aa		13.8	□□□□□ -0.2
HDAC6-231	ENST00000488905	DEFA4	P12838	97 aa		13.8	□□□□□ -0.2
HDAC6-231	ENST00000488905	MYOD1	P15172	320 aa		13.8	□□□□□ -0.2
HDAC6-231	ENST00000488905	PSMB9	P28065	219 aa		13.8	□□□□□ -0.2
HDAC6-231	ENST00000488905	ARPC4	P59998	168 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms