RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 CNIH1O95406 144 aa13.41□□□□□ -0.26
SHROOM1-205ENST00000488072 HPRT1P00492 218 aa13.41□□□□□ -0.26
SHROOM1-205ENST00000488072 KRASP01116 189 aa13.41□□□□□ -0.26
SHROOM1-205ENST00000488072 OR9G9P0C7N8 305 aa13.41□□□□□ -0.26
SHROOM1-205ENST00000488072 RND3P61587 244 aa13.41□□□□□ -0.26
SHROOM1-205ENST00000488072 KHDC1LQ5JSQ8 128 aa13.41□□□□□ -0.26
SHROOM1-205ENST00000488072 OR5T1Q8NG75 326 aa13.41□□□□□ -0.26
SHROOM1-205ENST00000488072 PRRT1Q99946 306 aa13.41□□□□□ -0.26
SHROOM1-205ENST00000488072 SLC2A8Q9NY64 477 aa13.41□□□□□ -0.26
SHROOM1-205ENST00000488072 HMX3A6NHT5 357 aa13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 MSGN1A6NI15 193 aa13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 CGB1A6NKQ9 187 aa13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 DBX1A6NMT0 343 aa13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 KBTBD11O94819 623 aa13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 OR2A4O95047 310 aa13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 IL6RP08887 468 aaPredicted RBP13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 VDAC1P21796 283 aa13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 BTCP35070 178 aa13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 ZNF45Q02386 682 aa13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 UNQ5815/PRO19632Q6UWF5 114 aa13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 LHFPL5Q8TAF8 219 aa13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 TMEM167AQ8TBQ9 72 aa13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 ZFAND1Q8TCF1 268 aa13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 MS4A10Q96PG2 267 aa13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 OR2A7Q96R45 310 aa13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 TMEM140Q9NV12 185 aa13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 COPZ2Q9P299 210 aa13.4□□□□□ -0.26
SHROOM1-205ENST00000488072 C3orf85A0A1B0GTC6 90 aa13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 A0A1W2PN81 502 aa13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 UPK2O00526 184 aa13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 RBMXL2O75526 392 aaKnown RBP13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 OR5AC1P0C628 307 aa13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 CHRNA7P36544 502 aa13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 TAS2R31P59538 309 aa13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 KIAA0141Q14154 515 aaPredicted RBP13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 POC5Q8NA72 575 aa13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 MINDY2Q8NBR6 621 aa13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 SGMS2Q8NHU3 365 aa13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 FAM110DQ8TAY7 271 aaPredicted RBP13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 SRSF12Q8WXF0 261 aaKnown RBP13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 BORCS5Q969J3 196 aa13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 DUX3Q96PT4 197 aa13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 PLEKHA2Q9HB19 425 aa13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 SCP2D1Q9UJQ7 156 aa13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 FLVCR2Q9UPI3 526 aa13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 TNCP24821 2201 aa13.39□□□□□ -0.27
SHROOM1-205ENST00000488072 A0A0G2JRQ6 117 aa13.38□□□□□ -0.27
SHROOM1-205ENST00000488072 HRASP01112 189 aa13.38□□□□□ -0.27
SHROOM1-205ENST00000488072 IGKV1-5P01602 117 aa13.38□□□□□ -0.27
SHROOM1-205ENST00000488072 PRH1P02810 166 aa13.38□□□□□ -0.27
SHROOM1-205ENST00000488072 NQO2P16083 231 aa13.38□□□□□ -0.27
SHROOM1-205ENST00000488072 AP3S2P59780 193 aa13.38□□□□□ -0.27
SHROOM1-205ENST00000488072 OR2B8PP59922 312 aa13.38□□□□□ -0.27
SHROOM1-205ENST00000488072 IFITM3Q01628 133 aa13.38□□□□□ -0.27
SHROOM1-205ENST00000488072 POU2AF1Q16633 256 aa13.38□□□□□ -0.27
SHROOM1-205ENST00000488072 DMBX1Q8NFW5 382 aa13.38□□□□□ -0.27
SHROOM1-205ENST00000488072 OR4X2Q8NGF9 303 aa13.38□□□□□ -0.27
SHROOM1-205ENST00000488072 ZNF486Q96H40 463 aaPredicted RBP13.38□□□□□ -0.27
SHROOM1-205ENST00000488072 NAA60Q9H7X0 242 aa13.38□□□□□ -0.27
SHROOM1-205ENST00000488072 C14orf166Q9Y224 244 aaKnown RBP13.38□□□□□ -0.27
SHROOM1-205ENST00000488072 MARCH11A6NNE9 402 aa13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 TEX22C9J3V5 150 aa13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 H0Y980 276 aa13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 IGLV1-40P01703 118 aa13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 IGHG4P01861 327 aa13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 PF4V1P10720 104 aa13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 AKR1C4P17516 323 aa13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 CD40LGP29965 261 aa13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 INPP1P49441 399 aa13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 CRIP2P52943 208 aaPredicted RBP13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 SUPT4H1P63272 117 aaKnown RBP13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 SLC35B1P78383 322 aa13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 TMED4Q7Z7H5 227 aa13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 MMD2Q8IY49 270 aa13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 SEC22AQ96IW7 307 aa13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 FYTTD1Q96QD9 318 aaKnown RBP13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 OR5B12Q96R08 314 aa13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 GNB4Q9HAV0 340 aa13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 BET1LQ9NYM9 111 aa13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 COMMD9Q9P000 198 aa13.37□□□□□ -0.27
SHROOM1-205ENST00000488072 TEX13DA0A0J9YY54 714 aaPredicted RBP13.36□□□□□ -0.27
SHROOM1-205ENST00000488072 CRYM-AS1A6NIL9 109 aa13.36□□□□□ -0.27
SHROOM1-205ENST00000488072 REG1AP05451 166 aa13.36□□□□□ -0.27
SHROOM1-205ENST00000488072 HLA-GP17693 338 aa13.36□□□□□ -0.27
SHROOM1-205ENST00000488072 PSMB8P28062 276 aa13.36□□□□□ -0.27
SHROOM1-205ENST00000488072 FAUP35544 74 aaKnown RBP13.36□□□□□ -0.27
SHROOM1-205ENST00000488072 RPL23AP62750 156 aaKnown RBP13.36□□□□□ -0.27
SHROOM1-205ENST00000488072 SURF2Q15527 256 aaPredicted RBP13.36□□□□□ -0.27
SHROOM1-205ENST00000488072 DEFB136Q30KP8 78 aa13.36□□□□□ -0.27
SHROOM1-205ENST00000488072 TEX38Q6PEX7 206 aa13.36□□□□□ -0.27
SHROOM1-205ENST00000488072 C8orf86Q6ZUL3 223 aa13.36□□□□□ -0.27
SHROOM1-205ENST00000488072 CCDC71LQ8N9Z2 235 aa13.36□□□□□ -0.27
SHROOM1-205ENST00000488072 CD300LFQ8TDQ1 290 aa13.36□□□□□ -0.27
SHROOM1-205ENST00000488072 GLYATL2Q8WU03 294 aa13.36□□□□□ -0.27
SHROOM1-205ENST00000488072 PHB2Q99623 299 aa13.36□□□□□ -0.27
SHROOM1-205ENST00000488072 ALX4Q9H161 411 aaPredicted RBP13.36□□□□□ -0.27
SHROOM1-205ENST00000488072 AREGP15514 252 aa13.35□□□□□ -0.27
SHROOM1-205ENST00000488072 S100GP29377 79 aa13.35□□□□□ -0.27
SHROOM1-205ENST00000488072 RPL27AP46776 148 aaKnown RBP13.35□□□□□ -0.27
SHROOM1-205ENST00000488072 RPL8P62917 257 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms