RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 DUTP33316 252 aaKnown RBP9.44□□□□□ -0.9
SDC3-204ENST00000487984 DEFA5Q01523 94 aa9.44□□□□□ -0.9
SDC3-204ENST00000487984 ZNF57Q68EA5 555 aaPredicted RBP9.44□□□□□ -0.9
SDC3-204ENST00000487984 HAPLN4Q86UW8 402 aa9.44□□□□□ -0.9
SDC3-204ENST00000487984 TOMM5Q8N4H5 51 aa9.44□□□□□ -0.9
SDC3-204ENST00000487984 IFT46Q9NQC8 304 aa9.44□□□□□ -0.9
SDC3-204ENST00000487984 SORL1Q92673 2214 aa9.44□□□□□ -0.9
SDC3-204ENST00000487984 RYR3Q15413 4870 aa9.43□□□□□ -0.9
SDC3-204ENST00000487984 CRYZL1O95825 349 aa9.43□□□□□ -0.9
SDC3-204ENST00000487984 RCVRNP35243 200 aa9.43□□□□□ -0.9
SDC3-204ENST00000487984 FAUP35544 74 aaKnown RBP9.43□□□□□ -0.9
SDC3-204ENST00000487984 UBE2KP61086 200 aa9.43□□□□□ -0.9
SDC3-204ENST00000487984 BAK1Q16611 211 aa9.43□□□□□ -0.9
SDC3-204ENST00000487984 PRSS8Q16651 343 aa9.43□□□□□ -0.9
SDC3-204ENST00000487984 VMA21Q3ZAQ7 101 aa9.43□□□□□ -0.9
SDC3-204ENST00000487984 MZT2BQ6NZ67 158 aa9.43□□□□□ -0.9
SDC3-204ENST00000487984 IDO2Q6ZQW0 420 aa9.43□□□□□ -0.9
SDC3-204ENST00000487984 OR52I2Q8NH67 350 aa9.43□□□□□ -0.9
SDC3-204ENST00000487984 GPX8Q8TED1 209 aa9.43□□□□□ -0.9
SDC3-204ENST00000487984 ADTRPQ96IZ2 230 aa9.43□□□□□ -0.9
SDC3-204ENST00000487984 TMEM68Q96MH6 324 aa9.43□□□□□ -0.9
SDC3-204ENST00000487984 OR4C12Q96R67 309 aa9.43□□□□□ -0.9
SDC3-204ENST00000487984 SDHCQ99643 169 aaPredicted RBP9.43□□□□□ -0.9
SDC3-204ENST00000487984 C7orf50Q9BRJ6 194 aaKnown RBP9.43□□□□□ -0.9
SDC3-204ENST00000487984 ST6GALNAC5Q9BVH7 336 aa9.43□□□□□ -0.9
SDC3-204ENST00000487984 TINAGL1Q9GZM7 467 aaPredicted RBP9.43□□□□□ -0.9
SDC3-204ENST00000487984 RANGRFQ9HD47 186 aaPredicted RBP9.43□□□□□ -0.9
SDC3-204ENST00000487984 MTFP1Q9UDX5 166 aa9.43□□□□□ -0.9
SDC3-204ENST00000487984 A0A0G2JLM5 398 aa9.42□□□□□ -0.9
SDC3-204ENST00000487984 ANKRD34BA5PLL1 514 aa9.42□□□□□ -0.9
SDC3-204ENST00000487984 MSGN1A6NI15 193 aa9.42□□□□□ -0.9
SDC3-204ENST00000487984 BRI3O95415 125 aa9.42□□□□□ -0.9
SDC3-204ENST00000487984 APELAP0DMC3 54 aa9.42□□□□□ -0.9
SDC3-204ENST00000487984 ZP3P21754 424 aa9.42□□□□□ -0.9
SDC3-204ENST00000487984 NFYAP23511 347 aaPredicted RBP9.42□□□□□ -0.9
SDC3-204ENST00000487984 DYRK1AQ13627 763 aa9.42□□□□□ -0.9
SDC3-204ENST00000487984 RNASE12Q5GAN4 147 aaKnown RBP9.42□□□□□ -0.9
SDC3-204ENST00000487984 OVCH2Q7RTZ1 564 aa9.42□□□□□ -0.9
SDC3-204ENST00000487984 LYSMD2Q8IV50 215 aa9.42□□□□□ -0.9
SDC3-204ENST00000487984 SBSPONQ8IVN8 264 aa9.42□□□□□ -0.9
SDC3-204ENST00000487984 ZNF645Q8N7E2 425 aa9.42□□□□□ -0.9
SDC3-204ENST00000487984 TEX45Q8NA69 505 aa9.42□□□□□ -0.9
SDC3-204ENST00000487984 NUDCD2Q8WVJ2 157 aa9.42□□□□□ -0.9
SDC3-204ENST00000487984 PHB2Q99623 299 aa9.42□□□□□ -0.9
SDC3-204ENST00000487984 RSRP1Q9BUV0 290 aa9.42□□□□□ -0.9
SDC3-204ENST00000487984 ELOVL1Q9BW60 279 aa9.42□□□□□ -0.9
SDC3-204ENST00000487984 COA4Q9NYJ1 87 aa9.42□□□□□ -0.9
SDC3-204ENST00000487984 RBMX2Q9Y388 322 aaKnown RBP9.42□□□□□ -0.9
SDC3-204ENST00000487984 HUWE1Q7Z6Z7 4374 aaKnown RBP9.42□□□□□ -0.9
SDC3-204ENST00000487984 DNAH7Q8WXX0 4024 aa9.41□□□□□ -0.9
SDC3-204ENST00000487984 NAP1L6A6NFF2 107 aa9.41□□□□□ -0.9
SDC3-204ENST00000487984 RBMXL2O75526 392 aaKnown RBP9.41□□□□□ -0.9
SDC3-204ENST00000487984 IGLV1-51P01701 117 aa9.41□□□□□ -0.9
SDC3-204ENST00000487984 FRMD6-AS1P0C7T7 363 aa9.41□□□□□ -0.9
SDC3-204ENST00000487984 TBPP20226 339 aa9.41□□□□□ -0.9
SDC3-204ENST00000487984 TAS2R19P59542 299 aa9.41□□□□□ -0.9
SDC3-204ENST00000487984 ASAH1Q13510 395 aa9.41□□□□□ -0.9
SDC3-204ENST00000487984 KLF5Q13887 457 aaPredicted RBP9.41□□□□□ -0.9
SDC3-204ENST00000487984 TNXAQ16473 311 aa9.41□□□□□ -0.9
SDC3-204ENST00000487984 RGS21Q2M5E4 152 aa9.41□□□□□ -0.9
SDC3-204ENST00000487984 ADAD2Q8NCV1 583 aaKnown RBP9.41□□□□□ -0.9
SDC3-204ENST00000487984 OSR1Q8TAX0 266 aaPredicted RBP9.41□□□□□ -0.9
SDC3-204ENST00000487984 SRSF12Q8WXF0 261 aaKnown RBP9.41□□□□□ -0.9
SDC3-204ENST00000487984 TRIM63Q969Q1 353 aa9.41□□□□□ -0.9
SDC3-204ENST00000487984 OR2W1Q9Y3N9 320 aa9.41□□□□□ -0.9
SDC3-204ENST00000487984 IGKV1D-13A0A0B4J2D9 117 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 ANKRD20A5PA0PJZ0 165 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 SSX5O60225 188 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 FCGR3BO75015 233 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 IGLV2-14P01704 120 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 TRBV12-3P01733 135 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 CTXN2P0C2S0 81 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 SAA1P0DJI8 122 aaPredicted RBP9.4□□□□□ -0.9
SDC3-204ENST00000487984 IGKV1-13P0DP09 117 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 PTHLHP12272 177 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 AADACP22760 399 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 SYNJ2BPP57105 145 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 RPL30P62888 115 aaKnown RBP9.4□□□□□ -0.9
SDC3-204ENST00000487984 OR2B11Q5JQS5 317 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 ZNF343Q6P1L6 599 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 IL34Q6ZMJ4 242 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 KCTD9Q7L273 389 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 TMEM229BQ8NBD8 167 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 USMG5Q96IX5 58 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 ZNF430Q9H8G1 570 aaPredicted RBP9.4□□□□□ -0.9
SDC3-204ENST00000487984 PEF1Q9UBV8 284 aaKnown RBP9.4□□□□□ -0.9
SDC3-204ENST00000487984 KLK11Q9UBX7 282 aa9.4□□□□□ -0.9
SDC3-204ENST00000487984 MPPED1O15442 326 aa9.39□□□□□ -0.91
SDC3-204ENST00000487984 TUSC2O75896 110 aa9.39□□□□□ -0.91
SDC3-204ENST00000487984 PTTG1O95997 202 aa9.39□□□□□ -0.91
SDC3-204ENST00000487984 OR9G9P0C7N8 305 aa9.39□□□□□ -0.91
SDC3-204ENST00000487984 AKAIN1P0CW23 69 aa9.39□□□□□ -0.91
SDC3-204ENST00000487984 TAS2R46P59540 309 aa9.39□□□□□ -0.91
SDC3-204ENST00000487984 MEF2DQ14814 521 aa9.39□□□□□ -0.91
SDC3-204ENST00000487984 CDK10Q15131 360 aa9.39□□□□□ -0.91
SDC3-204ENST00000487984 C10orf55Q5SWW7 151 aa9.39□□□□□ -0.91
SDC3-204ENST00000487984 HOGA1Q86XE5 327 aa9.39□□□□□ -0.91
SDC3-204ENST00000487984 OR9G4Q8NGQ1 327 aa9.39□□□□□ -0.91
SDC3-204ENST00000487984 RCHY1Q96PM5 261 aa9.39□□□□□ -0.91
SDC3-204ENST00000487984 ANXA10Q9UJ72 324 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms