RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 DOPEY2Q9Y3R5 2298 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 HELZ2Q9BYK8 2649 aaKnown RBP7.64□□□□□ -1.19
SF3B1-211ENST00000487698 POLQO75417 2590 aa7.64□□□□□ -1.19
SF3B1-211ENST00000487698 BORCS7-ASMTA0A0B4J1R7 106 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 H7C2Y5 167 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 SHOXO15266 292 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 ARG1P05089 322 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 DYNLT3P51808 116 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 CLEC2AQ6UVW9 174 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 VMO1Q7Z5L0 202 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 TMED6Q8WW62 240 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 LHX4Q969G2 390 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 FLYWCH2Q96CP2 140 aaKnown RBP7.63□□□□□ -1.19
SF3B1-211ENST00000487698 HARBI1Q96MB7 349 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 OR4C12Q96R67 309 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 GINS3Q9BRX5 216 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 ABCA12Q86UK0 2595 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 IGHV1-3A0A0C4DH29 117 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 IGHV4-61A0A0C4DH41 118 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 A0A1W2PPI3 338 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 UPK2O00526 184 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 FGF16O43320 207 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 FOXH1O75593 365 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 LY86O95711 162 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 IGLV2-23P01705 113 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 VDAC2P45880 294 aaPredicted RBP7.63□□□□□ -1.19
SF3B1-211ENST00000487698 ARL16Q0P5N6 197 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 KLRD1Q13241 179 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 CLINT1Q14677 625 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 SPANXN5Q5MJ07 72 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 TMEM217Q8N7C4 229 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 ATP5SQ99766 215 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 MMP26Q9NRE1 261 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 TCF19Q9Y242 345 aa7.63□□□□□ -1.19
SF3B1-211ENST00000487698 CELSR2Q9HCU4 2923 aa7.62□□□□□ -1.19
SF3B1-211ENST00000487698 CEBPZOSA8MTT3 80 aa7.62□□□□□ -1.19
SF3B1-211ENST00000487698 FAM157AC9JC47 383 aa7.62□□□□□ -1.19
SF3B1-211ENST00000487698 KBTBD11O94819 623 aa7.62□□□□□ -1.19
SF3B1-211ENST00000487698 IFNA17P01571 189 aa7.62□□□□□ -1.19
SF3B1-211ENST00000487698 METTL15P1P0C7V9 234 aa7.62□□□□□ -1.19
SF3B1-211ENST00000487698 FAM157CP0CG43 387 aa7.62□□□□□ -1.19
SF3B1-211ENST00000487698 HOXB4P17483 251 aaPredicted RBP7.62□□□□□ -1.19
SF3B1-211ENST00000487698 ZNF266Q14584 549 aa7.62□□□□□ -1.19
SF3B1-211ENST00000487698 SPINK9Q5DT21 86 aa7.62□□□□□ -1.19
SF3B1-211ENST00000487698 TPTE2P1Q5T6R2 138 aa7.62□□□□□ -1.19
SF3B1-211ENST00000487698 OR1S2Q8NGQ3 325 aa7.62□□□□□ -1.19
SF3B1-211ENST00000487698 RPEQ96AT9 228 aa7.62□□□□□ -1.19
SF3B1-211ENST00000487698 PERPQ96FX8 193 aa7.62□□□□□ -1.19
SF3B1-211ENST00000487698 MS4A7Q9GZW8 240 aaPredicted RBP7.62□□□□□ -1.19
SF3B1-211ENST00000487698 MED9Q9NWA0 146 aa7.62□□□□□ -1.19
SF3B1-211ENST00000487698 PRNDQ9UKY0 176 aa7.62□□□□□ -1.19
SF3B1-211ENST00000487698 ZNF257Q9Y2Q1 563 aa7.62□□□□□ -1.19
SF3B1-211ENST00000487698 IGHV4-30-2A0A087WSY4 118 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 PMS2P5A8MQ11 134 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 RNASEK-C17orf49H0YIS7 233 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 SPP1P10451 314 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 COL8A1P27658 744 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 HTR1DP28221 377 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 HSPE1P61604 102 aaKnown RBP7.61□□□□□ -1.19
SF3B1-211ENST00000487698 ZNF787Q6DD87 383 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 EIF5AL1Q6IS14 154 aaKnown RBP7.61□□□□□ -1.19
SF3B1-211ENST00000487698 PDZD9Q8IXQ8 264 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 TMEM167AQ8TBQ9 72 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 CXorf58Q96LI9 332 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 TBX15Q96SF7 602 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 PLA2G2EQ9NZK7 142 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 DPM3Q9P2X0 92 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 NUP50Q9UKX7 468 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 VPS13CQ709C8 3753 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 NAV3Q8IVL0 2385 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 PLXNB1O43157 2135 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 IGHV3-72A0A0B4J1Y9 119 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 C15orf62A8K5M9 175 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 LEUTXA8MZ59 168 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 J3QKU1 62 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 DFFBO76075 338 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 FGF2P09038 288 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 SEC11BP0C7V7 166 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 DSCR9P59020 149 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 HBG1P69891 147 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 HBG2P69892 147 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 HABP2Q14520 560 aaPredicted RBP7.61□□□□□ -1.19
SF3B1-211ENST00000487698 OR4A5Q8NH83 315 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 VSTM2AQ8TAG5 236 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 LRRC20Q8TCA0 184 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 RITA1Q96K30 269 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 STRAPQ9Y3F4 350 aaKnown RBP7.61□□□□□ -1.19
SF3B1-211ENST00000487698 OR51B2Q9Y5P1 312 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 INSIG2Q9Y5U4 225 aa7.61□□□□□ -1.19
SF3B1-211ENST00000487698 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.61□□□□□ -1.192e-8■■■■■ 29.3
SF3B1-211ENST00000487698 FBXO24O75426 580 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 TOX4O94842 621 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 MYOD1P15172 320 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 USF1P22415 310 aaPredicted RBP7.6□□□□□ -1.19
SF3B1-211ENST00000487698 CEACAM3P40198 252 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 LGALS7P47929 136 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 DVL1P1P54792 670 aaPredicted RBP7.6□□□□□ -1.19
SF3B1-211ENST00000487698 RPS16P62249 146 aaKnown RBP7.6□□□□□ -1.19
SF3B1-211ENST00000487698 PRCDQ00LT1 54 aa7.6□□□□□ -1.19
SF3B1-211ENST00000487698 SLC38A11Q08AI6 406 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms