RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 LINC00614P0C842 121 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 CD36P16671 472 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 OMGP23515 440 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 ELK4P28324 431 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 CCR7P32248 378 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 PSMD8P48556 350 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 RAB25P57735 213 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 TAS2R43P59537 309 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 RPL19P84098 196 aaKnown RBP2.29□□□□□ -2.04
UBR3-211ENST00000487689 REG3AQ06141 175 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 SMAGPQ0VAQ4 97 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 PAFAH1B3Q15102 231 aaKnown RBP2.29□□□□□ -2.04
UBR3-211ENST00000487689 TAF1AQ15573 450 aaPredicted RBP2.29□□□□□ -2.04
UBR3-211ENST00000487689 IL17AQ16552 155 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 LRRC75BQ2VPJ9 315 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 FBXL19-AS1Q494R0 122 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 Q499Y3 187 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 TMEM97Q5BJF2 176 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 C1orf195Q5TG92 126 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 TMEM42Q69YG0 159 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 PLET1Q6UQ28 207 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 SLC51BQ86UW2 128 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 ZCCHC24Q8N2G6 241 aaKnown RBP2.29□□□□□ -2.04
UBR3-211ENST00000487689 SLC35G3Q8N808 338 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 NPBQ8NG41 125 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 OR51D1Q8NGF3 324 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 OR10G4Q8NGN3 311 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 OR2V1Q8NHB1 315 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 SLC37A2Q8TED4 501 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 DCAKDQ8WVC6 231 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 SRSF12Q8WXF0 261 aaKnown RBP2.29□□□□□ -2.04
UBR3-211ENST00000487689 ASB17Q8WXJ9 295 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 CCL17Q92583 94 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 RDH5Q92781 318 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 RPUSD4Q96CM3 377 aaKnown RBP2.29□□□□□ -2.04
UBR3-211ENST00000487689 BTF3L4Q96K17 158 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 SMIM8Q96KF7 97 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 TIPINQ9BVW5 301 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 PECRQ9BY49 303 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 MROQ9BYG7 248 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 CHST5Q9GZS9 411 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 SLC25A31Q9H0C2 315 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 ZNF331Q9NQX6 463 aaPredicted RBP2.29□□□□□ -2.04
UBR3-211ENST00000487689 RBFOX1Q9NWB1 397 aaKnown RBP2.29□□□□□ -2.04
UBR3-211ENST00000487689 MED29Q9NX70 200 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 NUFIP1Q9UHK0 495 aaKnown RBP2.29□□□□□ -2.04
UBR3-211ENST00000487689 ZNF391Q9UJN7 358 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 PSG8Q9UQ74 426 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 MPDZO75970 2070 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 MYH10P35580 1976 aa2.29□□□□□ -2.04
UBR3-211ENST00000487689 DNAJC13O75165 2243 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 A0A096LNT2 108 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 IGKV1-8A0A0C4DH67 115 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 LOC105371267A0A1B0GV96 52 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 GNG14A0A1W2PPG7 69 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 CD300LBA8K4G0 201 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 PIRO00625 290 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 PLIN3O60664 434 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 NOS1APO75052 506 aaPredicted RBP2.28□□□□□ -2.04
UBR3-211ENST00000487689 NPIPB7O75200 414 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 SPAG7O75391 227 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 HAND1O96004 215 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 CD5P06127 495 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 CST2P09228 141 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 CBR1P16152 277 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 CRISP2P16562 243 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 PRTN3P24158 256 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 DDTP30046 118 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 MIPP30301 263 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 SLC6A1P30531 599 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 ACOT2P49753 483 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 H2BFSP57053 126 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 RAB4BP61018 213 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 RAB5BP61020 215 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 RPL23P62829 140 aaKnown RBP2.28□□□□□ -2.04
UBR3-211ENST00000487689 S100A12P80511 92 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 PNOCQ13519 176 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 EBPQ15125 230 aaKnown RBP2.28□□□□□ -2.04
UBR3-211ENST00000487689 ELOCQ15369 112 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 RBMY1FQ15415 496 aaKnown RBP2.28□□□□□ -2.04
UBR3-211ENST00000487689 BATFQ16520 125 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 RSPO1Q2MKA7 263 aaPredicted RBP2.28□□□□□ -2.04
UBR3-211ENST00000487689 ZNF404Q494X3 552 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 PYCR3Q53H96 274 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 YIF1BQ5BJH7 314 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 KPRPQ5T749 579 aaPredicted RBP2.28□□□□□ -2.04
UBR3-211ENST00000487689 HES5Q5TA89 166 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 TSPO2Q5TGU0 170 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 TRIQKQ629K1 86 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 KDM4DQ6B0I6 523 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 DHRS4L2Q6PKH6 230 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 OPN5Q6U736 354 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 SCGB1D4Q6XE38 83 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 SLC36A1Q7Z2H8 476 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 LYG2Q86SG7 212 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 GALNT10Q86SR1 603 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 MDP1Q86V88 176 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 OR6V1Q8N148 313 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 TMEM161BQ8NDZ6 487 aa2.28□□□□□ -2.04
UBR3-211ENST00000487689 OR10X1Q8NGY0 326 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms