RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 PAGE4O60829 102 aa21.54■■□□□ 1.04
HLA-C-208ENST00000487245 RPS16P62249 146 aaKnown RBP21.54■■□□□ 1.04
HLA-C-208ENST00000487245 TLE1Q04724 770 aa21.54■■□□□ 1.04
HLA-C-208ENST00000487245 TRGV10A0A0A0MS01 117 aa21.54■■□□□ 1.04
HLA-C-208ENST00000487245 PRSS46E5RG02 174 aa21.54■■□□□ 1.04
HLA-C-208ENST00000487245 PLA2G5P39877 138 aa21.54■■□□□ 1.04
HLA-C-208ENST00000487245 OPRK1P41145 380 aa21.54■■□□□ 1.04
HLA-C-208ENST00000487245 RELBQ01201 579 aa21.54■■□□□ 1.04
HLA-C-208ENST00000487245 C17orf58Q2M2W7 97 aa21.54■■□□□ 1.04
HLA-C-208ENST00000487245 DOLPP1Q86YN1 238 aa21.54■■□□□ 1.04
HLA-C-208ENST00000487245 DDB2Q92466 427 aa21.54■■□□□ 1.04
HLA-C-208ENST00000487245 C16orf97H3BN30 126 aa21.53■■□□□ 1.04
HLA-C-208ENST00000487245 IRF2P14316 349 aa21.53■■□□□ 1.04
HLA-C-208ENST00000487245 OR5B12Q96R08 314 aa21.53■■□□□ 1.04
HLA-C-208ENST00000487245 PITPNC1Q9UKF7 332 aa21.53■■□□□ 1.04
HLA-C-208ENST00000487245 DIDO1Q9BTC0 2240 aaKnown RBP21.53■■□□□ 1.04
HLA-C-208ENST00000487245 TRGV8A0A0C4DH27 118 aa21.52■■□□□ 1.04
HLA-C-208ENST00000487245 PDE6DO43924 150 aa21.52■■□□□ 1.04
HLA-C-208ENST00000487245 GALR1P47211 349 aa21.52■■□□□ 1.04
HLA-C-208ENST00000487245 ZNF134P52741 427 aa21.52■■□□□ 1.04
HLA-C-208ENST00000487245 GPR61Q9BZJ8 451 aa21.52■■□□□ 1.04
HLA-C-208ENST00000487245 HRASP01112 189 aa21.52■■□□□ 1.03
HLA-C-208ENST00000487245 GYPAP02724 150 aa21.52■■□□□ 1.03
HLA-C-208ENST00000487245 TDGF1P3P51864 188 aa21.52■■□□□ 1.03
HLA-C-208ENST00000487245 RPL39P5Q59GN2 51 aa21.52■■□□□ 1.03
HLA-C-208ENST00000487245 OR4X1Q8NH49 305 aa21.52■■□□□ 1.03
HLA-C-208ENST00000487245 OR4S2Q8NH73 311 aa21.52■■□□□ 1.03
HLA-C-208ENST00000487245 ADTRPQ96IZ2 230 aa21.52■■□□□ 1.03
HLA-C-208ENST00000487245 TXNDC17Q9BRA2 123 aa21.52■■□□□ 1.03
HLA-C-208ENST00000487245 GFI1BQ5VTD9 330 aa21.51■■□□□ 1.03
HLA-C-208ENST00000487245 OR10D4PQ8NGN7 298 aa21.51■■□□□ 1.03
HLA-C-208ENST00000487245 PLPPR2Q96GM1 343 aa21.51■■□□□ 1.03
HLA-C-208ENST00000487245 ABHD17AQ96GS6 310 aa21.51■■□□□ 1.03
HLA-C-208ENST00000487245 GAFA1Q96PS6 74 aa21.51■■□□□ 1.03
HLA-C-208ENST00000487245 A0A0G2JNJ9 132 aa21.5■■□□□ 1.03
HLA-C-208ENST00000487245 ZNF729A6NN14 1252 aaPredicted RBP21.5■■□□□ 1.03
HLA-C-208ENST00000487245 C11orf94C9JXX5 98 aa21.5■■□□□ 1.03
HLA-C-208ENST00000487245 GFRA3O60609 400 aa21.5■■□□□ 1.03
HLA-C-208ENST00000487245 SRP14P37108 136 aaKnown RBP21.5■■□□□ 1.03
HLA-C-208ENST00000487245 THBS3P49746 956 aa21.5■■□□□ 1.03
HLA-C-208ENST00000487245 FAM201AQ5SY85 155 aa21.5■■□□□ 1.03
HLA-C-208ENST00000487245 ZNF788Q6ZQV5 615 aa21.5■■□□□ 1.03
HLA-C-208ENST00000487245 CORO2AQ92828 525 aa21.5■■□□□ 1.03
HLA-C-208ENST00000487245 LINC00574Q9H8X3 128 aa21.5■■□□□ 1.03
HLA-C-208ENST00000487245 KCNIP2Q9NS61 270 aa21.5■■□□□ 1.03
HLA-C-208ENST00000487245 Q9UFV3 132 aa21.5■■□□□ 1.03
HLA-C-208ENST00000487245 DOCK11Q5JSL3 2073 aa21.5■■□□□ 1.03
HLA-C-208ENST00000487245 HCFC1P51610 2035 aa21.5■■□□□ 1.03
HLA-C-208ENST00000487245 F6UZH7 168 aa21.49■■□□□ 1.03
HLA-C-208ENST00000487245 TMPRSS2O15393 492 aa21.49■■□□□ 1.03
HLA-C-208ENST00000487245 IFNA10P01566 189 aa21.49■■□□□ 1.03
HLA-C-208ENST00000487245 TEX36Q5VZQ5 186 aa21.49■■□□□ 1.03
HLA-C-208ENST00000487245 TREML4Q6UXN2 200 aa21.49■■□□□ 1.03
HLA-C-208ENST00000487245 C22orf34Q6ZV56 151 aa21.49■■□□□ 1.03
HLA-C-208ENST00000487245 HEYLQ9NQ87 328 aaPredicted RBP21.49■■□□□ 1.03
HLA-C-208ENST00000487245 SSUH2Q9Y2M2 353 aa21.49■■□□□ 1.03
HLA-C-208ENST00000487245 GGCTO75223 188 aaKnown RBP21.49■■□□□ 1.03
HLA-C-208ENST00000487245 CD99P14209 185 aa21.49■■□□□ 1.03
HLA-C-208ENST00000487245 NPPCP23582 126 aa21.49■■□□□ 1.03
HLA-C-208ENST00000487245 CCKARP32238 428 aa21.49■■□□□ 1.03
HLA-C-208ENST00000487245 CT45A1Q5HYN5 189 aa21.49■■□□□ 1.03
HLA-C-208ENST00000487245 COA6Q5JTJ3 125 aaKnown RBP21.49■■□□□ 1.03
HLA-C-208ENST00000487245 CT45A3Q8NHU0 189 aa21.49■■□□□ 1.03
HLA-C-208ENST00000487245 TMEM140Q9NV12 185 aa21.49■■□□□ 1.03
HLA-C-208ENST00000487245 IDI2-AS1Q9NZ38 188 aa21.49■■□□□ 1.03
HLA-C-208ENST00000487245 TYMSP04818 313 aa21.48■■□□□ 1.03
HLA-C-208ENST00000487245 TNFRSF1AP19438 455 aa21.48■■□□□ 1.03
HLA-C-208ENST00000487245 TP53TG5Q9Y2B4 290 aa21.48■■□□□ 1.03
HLA-C-208ENST00000487245 RRHO14718 337 aa21.47■■□□□ 1.03
HLA-C-208ENST00000487245 SLC31A2O15432 143 aa21.47■■□□□ 1.03
HLA-C-208ENST00000487245 SELLP14151 372 aa21.47■■□□□ 1.03
HLA-C-208ENST00000487245 FAM3BP58499 235 aaPredicted RBP21.47■■□□□ 1.03
HLA-C-208ENST00000487245 SSX9Q7RTT3 188 aa21.47■■□□□ 1.03
HLA-C-208ENST00000487245 TCF19Q9Y242 345 aa21.47■■□□□ 1.03
HLA-C-208ENST00000487245 A0A1W2PPV4 95 aa21.46■■□□□ 1.03
HLA-C-208ENST00000487245 C15orf61A6NNL5 157 aa21.46■■□□□ 1.03
HLA-C-208ENST00000487245 PPP5D1E7EU14 171 aa21.46■■□□□ 1.03
HLA-C-208ENST00000487245 LURAP1LQ8IV03 231 aa21.46■■□□□ 1.03
HLA-C-208ENST00000487245 TMEM183AQ8IXX5 376 aa21.46■■□□□ 1.03
HLA-C-208ENST00000487245 CISD2Q8N5K1 135 aaKnown RBP21.46■■□□□ 1.03
HLA-C-208ENST00000487245 DEFB108BQ8NET1 73 aa21.46■■□□□ 1.03
HLA-C-208ENST00000487245 TMEM170AQ8WVE7 144 aa21.46■■□□□ 1.03
HLA-C-208ENST00000487245 CCL13Q99616 98 aa21.46■■□□□ 1.03
HLA-C-208ENST00000487245 MGST2Q99735 147 aa21.46■■□□□ 1.03
HLA-C-208ENST00000487245 GGTLC1Q9BX51 225 aa21.46■■□□□ 1.03
HLA-C-208ENST00000487245 MS4A5Q9H3V2 200 aa21.46■■□□□ 1.03
HLA-C-208ENST00000487245 STAG3L2P0CL84 134 aa21.45■■□□□ 1.02
HLA-C-208ENST00000487245 STAG3L3P0CL85 134 aa21.45■■□□□ 1.02
HLA-C-208ENST00000487245 MRPS11P82912 194 aaKnown RBP21.45■■□□□ 1.02
HLA-C-208ENST00000487245 POU2AF1Q16633 256 aa21.45■■□□□ 1.02
HLA-C-208ENST00000487245 C4orf17Q53FE4 359 aa21.45■■□□□ 1.02
HLA-C-208ENST00000487245 GFRALQ6UXV0 394 aa21.45■■□□□ 1.02
HLA-C-208ENST00000487245 JKAMPQ9P055 326 aa21.45■■□□□ 1.02
HLA-C-208ENST00000487245 FOXA2Q9Y261 457 aaPredicted RBP21.45■■□□□ 1.02
HLA-C-208ENST00000487245 ZNF835Q9Y2P0 537 aa21.45■■□□□ 1.02
HLA-C-208ENST00000487245 LSM4Q9Y4Z0 139 aaKnown RBP21.45■■□□□ 1.02
HLA-C-208ENST00000487245 TRAV38-1A0A0B4J264 116 aa21.45■■□□□ 1.02
HLA-C-208ENST00000487245 NKX6-3A6NJ46 265 aa21.45■■□□□ 1.02
HLA-C-208ENST00000487245 HIST1H1BP16401 226 aaKnown RBP21.45■■□□□ 1.02
HLA-C-208ENST00000487245 GNB1P62873 340 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms