RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 UXS1Q8NBZ7 420 aa14.51□□□□□ -0.09
SMPDL3A-202ENST00000487215 S4R3C0 116 aa14.51□□□□□ -0.09
SMPDL3A-202ENST00000487215 KMT2AQ03164 3969 aa14.51□□□□□ -0.09
SMPDL3A-202ENST00000487215 ZNF320A2RRD8 509 aa14.5□□□□□ -0.09
SMPDL3A-202ENST00000487215 IFITM5A6NNB3 132 aa14.5□□□□□ -0.09
SMPDL3A-202ENST00000487215 NPIPB5A8MRT5 1133 aa14.5□□□□□ -0.09
SMPDL3A-202ENST00000487215 MFNGO00587 321 aa14.5□□□□□ -0.09
SMPDL3A-202ENST00000487215 FCGR3BO75015 233 aa14.5□□□□□ -0.09
SMPDL3A-202ENST00000487215 GNB3P16520 340 aa14.5□□□□□ -0.09
SMPDL3A-202ENST00000487215 TNFRSF9Q07011 255 aa14.5□□□□□ -0.09
SMPDL3A-202ENST00000487215 BTNL8Q6UX41 500 aa14.5□□□□□ -0.09
SMPDL3A-202ENST00000487215 LYG2Q86SG7 212 aa14.5□□□□□ -0.09
SMPDL3A-202ENST00000487215 WFDC3Q8IUB2 231 aa14.5□□□□□ -0.09
SMPDL3A-202ENST00000487215 RPP25LQ8N5L8 163 aaKnown RBP14.5□□□□□ -0.09
SMPDL3A-202ENST00000487215 FANCD2OSQ96PS1 177 aa14.5□□□□□ -0.09
SMPDL3A-202ENST00000487215 IGKV1D-8A0A087WSZ0 117 aa14.49□□□□□ -0.09
SMPDL3A-202ENST00000487215 E7EUB6 86 aa14.49□□□□□ -0.09
SMPDL3A-202ENST00000487215 IL6RP08887 468 aaPredicted RBP14.49□□□□□ -0.09
SMPDL3A-202ENST00000487215 HIST1H1DP16402 221 aaKnown RBP14.49□□□□□ -0.09
SMPDL3A-202ENST00000487215 GALP22466 123 aa14.49□□□□□ -0.09
SMPDL3A-202ENST00000487215 ARFRP1Q13795 201 aa14.49□□□□□ -0.09
SMPDL3A-202ENST00000487215 ANKRD55Q3KP44 614 aa14.49□□□□□ -0.09
SMPDL3A-202ENST00000487215 FAM106AQ4KMX7 169 aa14.49□□□□□ -0.09
SMPDL3A-202ENST00000487215 TM4SF20Q53R12 229 aa14.49□□□□□ -0.09
SMPDL3A-202ENST00000487215 OR2B11Q5JQS5 317 aa14.49□□□□□ -0.09
SMPDL3A-202ENST00000487215 KCTD9Q7L273 389 aa14.49□□□□□ -0.09
SMPDL3A-202ENST00000487215 VKORC1L1Q8N0U8 176 aa14.49□□□□□ -0.09
SMPDL3A-202ENST00000487215 OR51E2Q9H255 320 aa14.49□□□□□ -0.09
SMPDL3A-202ENST00000487215 A0A075B6Q4 140 aa14.48□□□□□ -0.09
SMPDL3A-202ENST00000487215 A0A1B0GW64 132 aa14.48□□□□□ -0.09
SMPDL3A-202ENST00000487215 TRDV1A0A1B0GX56 115 aa14.48□□□□□ -0.09
SMPDL3A-202ENST00000487215 DPPA5A6NC42 116 aa14.48□□□□□ -0.09
SMPDL3A-202ENST00000487215 J3QRK9 145 aa14.48□□□□□ -0.09
SMPDL3A-202ENST00000487215 RAB3BP20337 219 aa14.48□□□□□ -0.09
SMPDL3A-202ENST00000487215 RPL27AP46776 148 aaKnown RBP14.48□□□□□ -0.09
SMPDL3A-202ENST00000487215 RPL30P62888 115 aaKnown RBP14.48□□□□□ -0.09
SMPDL3A-202ENST00000487215 OR4A47Q6IF82 309 aa14.48□□□□□ -0.09
SMPDL3A-202ENST00000487215 Q6ZS49 121 aa14.48□□□□□ -0.09
SMPDL3A-202ENST00000487215 ZNF645Q8N7E2 425 aa14.48□□□□□ -0.09
SMPDL3A-202ENST00000487215 FYTTD1Q96QD9 318 aaKnown RBP14.48□□□□□ -0.09
SMPDL3A-202ENST00000487215 NDUFB11Q9NX14 153 aa14.48□□□□□ -0.09
SMPDL3A-202ENST00000487215 TP53TG1Q9Y2A0 90 aa14.48□□□□□ -0.09
SMPDL3A-202ENST00000487215 RAB27BO00194 218 aa14.47□□□□□ -0.09
SMPDL3A-202ENST00000487215 KBTBD11O94819 623 aa14.47□□□□□ -0.09
SMPDL3A-202ENST00000487215 CRYGCP07315 174 aa14.47□□□□□ -0.09
SMPDL3A-202ENST00000487215 AREGP15514 252 aa14.47□□□□□ -0.09
SMPDL3A-202ENST00000487215 Q6ZWC4 215 aa14.47□□□□□ -0.09
SMPDL3A-202ENST00000487215 EEF1AKMT3Q96AZ1 226 aa14.47□□□□□ -0.09
SMPDL3A-202ENST00000487215 CNBD2Q96M20 576 aa14.47□□□□□ -0.09
SMPDL3A-202ENST00000487215 SLC2A9Q9NRM0 540 aa14.47□□□□□ -0.09
SMPDL3A-202ENST00000487215 MRPS7Q9Y2R9 242 aaKnown RBP14.47□□□□□ -0.09
SMPDL3A-202ENST00000487215 PRELID3BQ9Y3B1 194 aa14.47□□□□□ -0.09
SMPDL3A-202ENST00000487215 TRAV25A0A0B4J276 109 aa14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 SPRY2O43597 315 aa14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 MRPS14O60783 128 aaKnown RBP14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 ZNF735P0CB33 412 aa14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 PSMB6P28072 239 aa14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 BMI1P35226 326 aa14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 OR10A3P58181 314 aa14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 SSX1Q16384 188 aa14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 KLK9Q2XQG4 91 aa14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 DEFB135Q30KP9 77 aa14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 UNQ9165/PRO28630Q6UXU0 137 aa14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 IZUMO2Q6UXV1 221 aa14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 OR1L6Q8NGR2 347 aa14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 VSTM2AQ8TAG5 236 aa14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 TMEM167AQ8TBQ9 72 aa14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 OR2A7Q96R45 310 aa14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 KLK9Q9UKQ9 250 aa14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 KLK5Q9Y337 293 aaPredicted RBP14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 RBMX2Q9Y388 322 aaKnown RBP14.46□□□□□ -0.09
SMPDL3A-202ENST00000487215 DEDDO75618 318 aa14.45□□□□□ -0.1
SMPDL3A-202ENST00000487215 IGLV2-14P01704 120 aa14.45□□□□□ -0.1
SMPDL3A-202ENST00000487215 CTXN2P0C2S0 81 aa14.45□□□□□ -0.1
SMPDL3A-202ENST00000487215 C8orf88P0DMB2 117 aa14.45□□□□□ -0.1
SMPDL3A-202ENST00000487215 CTRB1P17538 263 aa14.45□□□□□ -0.1
SMPDL3A-202ENST00000487215 DTYMKP23919 212 aa14.45□□□□□ -0.1
SMPDL3A-202ENST00000487215 APOC4P55056 127 aa14.45□□□□□ -0.1
SMPDL3A-202ENST00000487215 CTRB2Q6GPI1 263 aa14.45□□□□□ -0.1
SMPDL3A-202ENST00000487215 RBPMS2Q6ZRY4 209 aaKnown RBP14.45□□□□□ -0.1
SMPDL3A-202ENST00000487215 PUSL1Q8N0Z8 303 aaKnown RBP14.45□□□□□ -0.1
SMPDL3A-202ENST00000487215 MARC2Q969Z3 335 aa14.45□□□□□ -0.1
SMPDL3A-202ENST00000487215 ATG5Q9H1Y0 275 aa14.45□□□□□ -0.1
SMPDL3A-202ENST00000487215 RAB26Q9ULW5 256 aa14.45□□□□□ -0.1
SMPDL3A-202ENST00000487215 PCLOQ9Y6V0 5065 aa14.45□□□□□ -0.1
SMPDL3A-202ENST00000487215 MFSD2BA6NFX1 497 aa14.44□□□□□ -0.1
SMPDL3A-202ENST00000487215 SCGNO76038 276 aa14.44□□□□□ -0.1
SMPDL3A-202ENST00000487215 SLC22A5O76082 557 aa14.44□□□□□ -0.1
SMPDL3A-202ENST00000487215 DHFRP00374 187 aa14.44□□□□□ -0.1
SMPDL3A-202ENST00000487215 CD36P16671 472 aa14.44□□□□□ -0.1
SMPDL3A-202ENST00000487215 ATF4P18848 351 aaPredicted RBP14.44□□□□□ -0.1
SMPDL3A-202ENST00000487215 NFYAP23511 347 aaPredicted RBP14.44□□□□□ -0.1
SMPDL3A-202ENST00000487215 MAS1LP35410 378 aa14.44□□□□□ -0.1
SMPDL3A-202ENST00000487215 ZNF585BQ52M93 769 aa14.44□□□□□ -0.1
SMPDL3A-202ENST00000487215 OR2C3Q8N628 320 aa14.44□□□□□ -0.1
SMPDL3A-202ENST00000487215 OR4S2Q8NH73 311 aa14.44□□□□□ -0.1
SMPDL3A-202ENST00000487215 ELF5Q9UKW6 265 aaPredicted RBP14.44□□□□□ -0.1
SMPDL3A-202ENST00000487215 OR2W1Q9Y3N9 320 aa14.44□□□□□ -0.1
SMPDL3A-202ENST00000487215 IGLV11-55A0A075B6I3 123 aa14.43□□□□□ -0.1
SMPDL3A-202ENST00000487215 HLA-DQB1P01920 261 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms