RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 CAPSLQ8WWF8 208 aa4.84□□□□□ -1.63
USP41-204ENST00000486536 RTN4IP1Q8WWV3 396 aaPredicted RBP4.84□□□□□ -1.63
USP41-204ENST00000486536 ZNF714Q96N38 554 aa4.84□□□□□ -1.63
USP41-204ENST00000486536 PHB2Q99623 299 aa4.84□□□□□ -1.63
USP41-204ENST00000486536 DCTN5Q9BTE1 182 aa4.84□□□□□ -1.63
USP41-204ENST00000486536 SUCNR1Q9BXA5 334 aa4.84□□□□□ -1.63
USP41-204ENST00000486536 NAA60Q9H7X0 242 aa4.84□□□□□ -1.63
USP41-204ENST00000486536 SLC2A9Q9NRM0 540 aa4.84□□□□□ -1.63
USP41-204ENST00000486536 IDI2-AS1Q9NZ38 188 aa4.84□□□□□ -1.63
USP41-204ENST00000486536 OR1A1Q9P1Q5 309 aa4.84□□□□□ -1.63
USP41-204ENST00000486536 GAB2Q9UQC2 676 aa4.84□□□□□ -1.63
USP41-204ENST00000486536 RBM7Q9Y580 266 aaKnown RBP4.84□□□□□ -1.63
USP41-204ENST00000486536 CACNA1DQ01668 2161 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 IGKV1D-13A0A0B4J2D9 117 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 RNF212BA8MTL3 300 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 CCL24O00175 119 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 FCN3O75636 299 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 LY6HO94772 140 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 IGHV4-39P01824 125 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 APOHP02749 345 aaPredicted RBP4.83□□□□□ -1.64
USP41-204ENST00000486536 IGKV1-13P0DP09 117 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 CD34P28906 385 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 CNN1P51911 297 aaKnown RBP4.83□□□□□ -1.64
USP41-204ENST00000486536 SUPT4H1P63272 117 aaKnown RBP4.83□□□□□ -1.64
USP41-204ENST00000486536 FCN2Q15485 313 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 AVPI1Q5T686 147 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 HEPN1Q6WQI6 88 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 ZNF818PQ6ZRF7 136 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 C5orf24Q7Z6I8 188 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 TCTE3Q8IZS6 198 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 ZNF645Q8N7E2 425 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 TCTEX1D1Q8N7M0 179 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 MAPKAPK5-AS1Q8N8E1 139 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 LRTM2Q8N967 370 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 C8orf31Q8N9H6 132 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.83□□□□□ -1.64
USP41-204ENST00000486536 LY6G5BQ8NDX9 201 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 OR11H7Q8NGC8 314 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 RFESDQ8TAC1 157 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 H1FXQ92522 213 aaKnown RBP4.83□□□□□ -1.64
USP41-204ENST00000486536 ST6GAL2Q96JF0 529 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 ALKBH7Q9BT30 221 aaPredicted RBP4.83□□□□□ -1.64
USP41-204ENST00000486536 CCL28Q9NRJ3 127 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 C19orf12Q9NSK7 152 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 FAM212BQ9NTI7 297 aaPredicted RBP4.83□□□□□ -1.64
USP41-204ENST00000486536 GNG12Q9UBI6 72 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 RPUSD1Q9UJJ7 312 aaKnown RBP4.83□□□□□ -1.64
USP41-204ENST00000486536 FBN2P35556 2912 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 CSMD1Q96PZ7 3565 aa4.83□□□□□ -1.64
USP41-204ENST00000486536 SPTBN1Q01082 2364 aaKnown RBP4.83□□□□□ -1.64
USP41-204ENST00000486536 RTTNQ86VV8 2226 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 ESPL1Q14674 2120 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 IGHV3-43A0A0B4J1X8 118 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 PPIAL4CA0A0B4J2A2 164 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 C3orf85A0A1B0GTC6 90 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 DUXBA0A1W2PPF3 345 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 C17orf98A8MV24 154 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 A8MXK9 166 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 H0Y980 276 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 HSD17B6O14756 317 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 PGLYRP1O75594 196 aaPredicted RBP4.82□□□□□ -1.64
USP41-204ENST00000486536 SNAPC5O75971 98 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 OR2A4O95047 310 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 IGHV2-5P01817 119 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 GIPP09681 153 aaPredicted RBP4.82□□□□□ -1.64
USP41-204ENST00000486536 OR8U9P0C7N5 309 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 PPIAL4GP0DN37 164 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 IGHV3-43DP0DP04 118 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 F2RP25116 425 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 PPP1CCP36873 323 aaKnown RBP4.82□□□□□ -1.64
USP41-204ENST00000486536 ATP5J2P56134 94 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 DLX6P56179 175 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 GNB2P62879 340 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 CATR1Q13166 79 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 TMEM187Q14656 261 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 GNMTQ14749 295 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 KRTAP21-3Q3LHN1 58 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 CLEC2AQ6UVW9 174 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 SLC25A48Q6ZT89 311 aaKnown RBP4.82□□□□□ -1.64
USP41-204ENST00000486536 LGI3Q8N145 548 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 LRRC75A-AS1Q8N1F1 130 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 FGFRL1Q8N441 504 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 ZNF525Q8N782 197 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 ZNF439Q8NDP4 499 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 OR8U1Q8NH10 309 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 UBALD1Q8TB05 177 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 ZNF596Q8TC21 504 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 CASTOR1Q8WTX7 329 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 TNFRSF14Q92956 283 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 IL22RA2Q969J5 263 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 TMEM56Q96MV1 263 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 OR2A7Q96R45 310 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 AGMATQ9BSE5 352 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 KRTAP4-8Q9BYQ9 185 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 ZNF436Q9C0F3 470 aaPredicted RBP4.82□□□□□ -1.64
USP41-204ENST00000486536 OR2D2Q9H210 308 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 RAB18Q9NP72 206 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 PIPOXQ9P0Z9 390 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 TMEM56-RWDD3S4R434 201 aa4.82□□□□□ -1.64
USP41-204ENST00000486536 MYO7BQ6PIF6 2116 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms