RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 SLC25A42Q86VD7 318 aa9.94□□□□□ -0.82
CHMP3-208ENST00000486404 ANKRD13BQ86YJ7 626 aa9.94□□□□□ -0.82
CHMP3-208ENST00000486404 ADAD2Q8NCV1 583 aaKnown RBP9.94□□□□□ -0.82
CHMP3-208ENST00000486404 OR6Q1Q8NGQ2 317 aa9.94□□□□□ -0.82
CHMP3-208ENST00000486404 GIMAP1Q8WWP7 306 aa9.94□□□□□ -0.82
CHMP3-208ENST00000486404 USMG5Q96IX5 58 aa9.94□□□□□ -0.82
CHMP3-208ENST00000486404 FYTTD1Q96QD9 318 aaKnown RBP9.94□□□□□ -0.82
CHMP3-208ENST00000486404 OR4C12Q96R67 309 aa9.94□□□□□ -0.82
CHMP3-208ENST00000486404 ZNF2Q9BSG1 426 aaPredicted RBP9.94□□□□□ -0.82
CHMP3-208ENST00000486404 RSRP1Q9BUV0 290 aa9.94□□□□□ -0.82
CHMP3-208ENST00000486404 ELOVL1Q9BW60 279 aa9.94□□□□□ -0.82
CHMP3-208ENST00000486404 NAA50Q9GZZ1 169 aaKnown RBP9.94□□□□□ -0.82
CHMP3-208ENST00000486404 SCPEP1Q9HB40 452 aa9.94□□□□□ -0.82
CHMP3-208ENST00000486404 SCOCQ9UIL1 159 aa9.94□□□□□ -0.82
CHMP3-208ENST00000486404 ANAPC10Q9UM13 185 aa9.94□□□□□ -0.82
CHMP3-208ENST00000486404 FAM223BA6NKX1 122 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 RBFOX2O43251 390 aaKnown RBP eCLIP9.93□□□□□ -0.82
CHMP3-208ENST00000486404 BRI3O95415 125 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 RLN1P04808 185 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 HLA-DMAP28067 261 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 S100GP29377 79 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 RCVRNP35243 200 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 HRH1P35367 487 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 MAS1LP35410 378 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 RFX2P48378 723 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 ERVK-16P61578 105 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 TSPAN5P62079 268 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 RPL8P62917 257 aaKnown RBP9.93□□□□□ -0.82
CHMP3-208ENST00000486404 RHOGP84095 191 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 DYRK1AQ13627 763 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 EXOSC2Q13868 293 aaKnown RBP9.93□□□□□ -0.82
CHMP3-208ENST00000486404 FAM223AQ8IWN6 122 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 CMTM1Q8IZ96 169 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 PUSL1Q8N0Z8 303 aaKnown RBP9.93□□□□□ -0.82
CHMP3-208ENST00000486404 DMBX1Q8NFW5 382 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 OR4A5Q8NH83 315 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 TMEM167AQ8TBQ9 72 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 CD300LFQ8TDQ1 290 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 MOB3AQ96BX8 217 aa9.93□□□□□ -0.82
CHMP3-208ENST00000486404 SORL1Q92673 2214 aa9.92□□□□□ -0.82
CHMP3-208ENST00000486404 HPRT1P00492 218 aa9.92□□□□□ -0.82
CHMP3-208ENST00000486404 PRH1P02810 166 aa9.92□□□□□ -0.82
CHMP3-208ENST00000486404 NQO2P16083 231 aa9.92□□□□□ -0.82
CHMP3-208ENST00000486404 ELK1P19419 428 aa9.92□□□□□ -0.82
CHMP3-208ENST00000486404 TAS2R31P59538 309 aa9.92□□□□□ -0.82
CHMP3-208ENST00000486404 CTF1Q16619 201 aa9.92□□□□□ -0.82
CHMP3-208ENST00000486404 RPEL1Q2QD12 228 aa9.92□□□□□ -0.82
CHMP3-208ENST00000486404 RNASE12Q5GAN4 147 aaKnown RBP9.92□□□□□ -0.82
CHMP3-208ENST00000486404 OR4A47Q6IF82 309 aa9.92□□□□□ -0.82
CHMP3-208ENST00000486404 ACSM6Q6P461 480 aa9.92□□□□□ -0.82
CHMP3-208ENST00000486404 OR6F1Q8NGZ6 308 aa9.92□□□□□ -0.82
CHMP3-208ENST00000486404 FXYD6Q9H0Q3 95 aa9.92□□□□□ -0.82
CHMP3-208ENST00000486404 COMMD9Q9P000 198 aa9.92□□□□□ -0.82
CHMP3-208ENST00000486404 PEF1Q9UBV8 284 aaKnown RBP9.92□□□□□ -0.82
CHMP3-208ENST00000486404 ZNF257Q9Y2Q1 563 aa9.92□□□□□ -0.82
CHMP3-208ENST00000486404 HMX3A6NHT5 357 aa9.91□□□□□ -0.82
CHMP3-208ENST00000486404 NOL3O60936 208 aaKnown RBP9.91□□□□□ -0.82
CHMP3-208ENST00000486404 S1PR2O95136 353 aa9.91□□□□□ -0.82
CHMP3-208ENST00000486404 DHFRP00374 187 aa9.91□□□□□ -0.82
CHMP3-208ENST00000486404 ZNF182P17025 639 aaPredicted RBP9.91□□□□□ -0.82
CHMP3-208ENST00000486404 HLA-GP17693 338 aa9.91□□□□□ -0.82
CHMP3-208ENST00000486404 NAT1P18440 290 aa9.91□□□□□ -0.82
CHMP3-208ENST00000486404 ATP5G2Q06055 141 aa9.91□□□□□ -0.82
CHMP3-208ENST00000486404 TTC9CQ8N5M4 171 aa9.91□□□□□ -0.82
CHMP3-208ENST00000486404 NECAP1Q8NC96 275 aa9.91□□□□□ -0.82
CHMP3-208ENST00000486404 GPX8Q8TED1 209 aa9.91□□□□□ -0.82
CHMP3-208ENST00000486404 B9D2Q9BPU9 175 aa9.91□□□□□ -0.82
CHMP3-208ENST00000486404 AKIP1Q9NQ31 210 aa9.91□□□□□ -0.82
CHMP3-208ENST00000486404 TMEM140Q9NV12 185 aa9.91□□□□□ -0.82
CHMP3-208ENST00000486404 BET1LQ9NYM9 111 aa9.91□□□□□ -0.82
CHMP3-208ENST00000486404 EXTL2Q9UBQ6 330 aa9.91□□□□□ -0.82
CHMP3-208ENST00000486404 ADAM30Q9UKF2 790 aa9.91□□□□□ -0.82
CHMP3-208ENST00000486404 NPIPB5A8MRT5 1133 aa9.9□□□□□ -0.82
CHMP3-208ENST00000486404 TEX22C9J3V5 150 aa9.9□□□□□ -0.82
CHMP3-208ENST00000486404 GPR31O00270 319 aa9.9□□□□□ -0.82
CHMP3-208ENST00000486404 OR2J3O76001 311 aa9.9□□□□□ -0.82
CHMP3-208ENST00000486404 GNRHRP30968 328 aa9.9□□□□□ -0.82
CHMP3-208ENST00000486404 SYNJ2BPP57105 145 aa9.9□□□□□ -0.82
CHMP3-208ENST00000486404 BRWD1-AS2P59051 145 aa9.9□□□□□ -0.82
CHMP3-208ENST00000486404 TATDN3Q17R31 274 aa9.9□□□□□ -0.82
CHMP3-208ENST00000486404 C15orf32Q32M92 178 aa9.9□□□□□ -0.82
CHMP3-208ENST00000486404 FAM209BQ5JX69 171 aa9.9□□□□□ -0.82
CHMP3-208ENST00000486404 ZNF343Q6P1L6 599 aa9.9□□□□□ -0.82
CHMP3-208ENST00000486404 DHRS11Q6UWP2 260 aa9.9□□□□□ -0.82
CHMP3-208ENST00000486404 COMMD5Q9GZQ3 224 aa9.9□□□□□ -0.82
CHMP3-208ENST00000486404 PLEKHA2Q9HB19 425 aa9.9□□□□□ -0.82
CHMP3-208ENST00000486404 MARCH11A6NNE9 402 aa9.89□□□□□ -0.83
CHMP3-208ENST00000486404 RGS5O15539 181 aa9.89□□□□□ -0.83
CHMP3-208ENST00000486404 TRBV12-3P01733 135 aa9.89□□□□□ -0.83
CHMP3-208ENST00000486404 IFNA6P05013 189 aa9.89□□□□□ -0.83
CHMP3-208ENST00000486404 ZNF735P0CB33 412 aa9.89□□□□□ -0.83
CHMP3-208ENST00000486404 DEFA4P12838 97 aa9.89□□□□□ -0.83
CHMP3-208ENST00000486404 AREGP15514 252 aa9.89□□□□□ -0.83
CHMP3-208ENST00000486404 SPNP16150 400 aa9.89□□□□□ -0.83
CHMP3-208ENST00000486404 ZNF45Q02386 682 aa9.89□□□□□ -0.83
CHMP3-208ENST00000486404 PHLDA2Q53GA4 152 aa9.89□□□□□ -0.83
CHMP3-208ENST00000486404 LPCAT3Q6P1A2 487 aa9.89□□□□□ -0.83
CHMP3-208ENST00000486404 HAPLN4Q86UW8 402 aa9.89□□□□□ -0.83
CHMP3-208ENST00000486404 CLVS1Q8IUQ0 354 aaPredicted RBP9.89□□□□□ -0.83
CHMP3-208ENST00000486404 OR9G4Q8NGQ1 327 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms