RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 CCDC59Q9P031 241 aaKnown RBP9.72□□□□□ -0.85
PTCD1-205ENST00000485746 KLK11Q9UBX7 282 aa9.72□□□□□ -0.85
PTCD1-205ENST00000485746 ZMAT5Q9UDW3 170 aaKnown RBP9.72□□□□□ -0.85
PTCD1-205ENST00000485746 SEC14L6B5MCN3 397 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 RAMP3O60896 148 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 PGLYRP1O75594 196 aaPredicted RBP9.71□□□□□ -0.86
PTCD1-205ENST00000485746 TPPPO94811 219 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 KBTBD11O94819 623 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 HSPB1P04792 205 aaKnown RBP9.71□□□□□ -0.86
PTCD1-205ENST00000485746 OR9G9P0C7N8 305 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 NQO2P16083 231 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 MAS1LP35410 378 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 RPL27AP46776 148 aaKnown RBP9.71□□□□□ -0.86
PTCD1-205ENST00000485746 TAS2R31P59538 309 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 SSBP2P81877 361 aaPredicted RBP9.71□□□□□ -0.86
PTCD1-205ENST00000485746 IL18Q14116 193 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 PHLDA2Q53GA4 152 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 RNASE10Q5GAN6 216 aaKnown RBP9.71□□□□□ -0.86
PTCD1-205ENST00000485746 C9orf66Q5T8R8 295 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 SLC25A42Q86VD7 318 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 OR4A5Q8NH83 315 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 DYNC2LI1Q8TCX1 351 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 ISOC1Q96CN7 298 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 FXYD6Q9H0Q3 95 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 MIXL1Q9H2W2 232 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 AURKAIP1Q9NWT8 199 aaPredicted RBP9.71□□□□□ -0.86
PTCD1-205ENST00000485746 WNK1Q9H4A3 2382 aa9.71□□□□□ -0.86
PTCD1-205ENST00000485746 H3BMQ9 156 aa9.7□□□□□ -0.86
PTCD1-205ENST00000485746 RBFOX2O43251 390 aaKnown RBP eCLIP9.7□□□□□ -0.86
PTCD1-205ENST00000485746 RPA2P15927 270 aa9.7□□□□□ -0.86
PTCD1-205ENST00000485746 LPAR6P43657 344 aa9.7□□□□□ -0.86
PTCD1-205ENST00000485746 BRWD1-AS2P59051 145 aa9.7□□□□□ -0.86
PTCD1-205ENST00000485746 RPL8P62917 257 aaKnown RBP9.7□□□□□ -0.86
PTCD1-205ENST00000485746 MRGPRG-AS1Q2M3A8 158 aa9.7□□□□□ -0.86
PTCD1-205ENST00000485746 C10orf55Q5SWW7 151 aa9.7□□□□□ -0.86
PTCD1-205ENST00000485746 PUSL1Q8N0Z8 303 aaKnown RBP9.7□□□□□ -0.86
PTCD1-205ENST00000485746 TMEM167AQ8TBQ9 72 aa9.7□□□□□ -0.86
PTCD1-205ENST00000485746 ABHD1Q96SE0 405 aa9.7□□□□□ -0.86
PTCD1-205ENST00000485746 TINAGL1Q9GZM7 467 aaPredicted RBP9.7□□□□□ -0.86
PTCD1-205ENST00000485746 RABL2AQ9UBK7 228 aaPredicted RBP9.7□□□□□ -0.86
PTCD1-205ENST00000485746 MTFP1Q9UDX5 166 aa9.7□□□□□ -0.86
PTCD1-205ENST00000485746 RABL2BQ9UNT1 228 aa9.7□□□□□ -0.86
PTCD1-205ENST00000485746 CMYA5Q8N3K9 4069 aa9.7□□□□□ -0.86
PTCD1-205ENST00000485746 IGHV4OR15-8A0A075B7B6 117 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 A0A087WW49 117 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 ANKRD34BA5PLL1 514 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 HMX3A6NHT5 357 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 OVOL1O14753 267 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 S1PR2O95136 353 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 CD3DP04234 171 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 VWFP04275 2813 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 F2RP25116 425 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 SLURP1P55000 103 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 TAS2R19P59542 299 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 MRPS10P82664 201 aaKnown RBP9.69□□□□□ -0.86
PTCD1-205ENST00000485746 DEFB121Q5J5C9 76 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 VAX1Q5SQQ9 334 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 ASPHD1Q5U4P2 390 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 OR4A47Q6IF82 309 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 SLC38A6Q8IZM9 456 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 TMEM229BQ8NBD8 167 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 MCFD2Q8NI22 146 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 DCUN1D4Q92564 292 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 DGCR14Q96DF8 476 aaKnown RBP9.69□□□□□ -0.86
PTCD1-205ENST00000485746 USMG5Q96IX5 58 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 PLEKHA2Q9HB19 425 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 RANGRFQ9HD47 186 aaPredicted RBP9.69□□□□□ -0.86
PTCD1-205ENST00000485746 BET1LQ9NYM9 111 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 COMMD9Q9P000 198 aa9.69□□□□□ -0.86
PTCD1-205ENST00000485746 GABARAPH6UMI1 98 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 SNAPC5O75971 98 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 RAB3DO95716 219 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 PRH1P02810 166 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 DEFA4P12838 97 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 HLA-GP17693 338 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 TBPP20226 339 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 KRTAP10-11P60412 298 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 DGCR2P98153 550 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 DEFA5Q01523 94 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 ATP5G2Q06055 141 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 FHL3Q13643 280 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 SCGB2B2Q4G0G5 96 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 TBC1D26Q86UD7 250 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 ADAD2Q8NCV1 583 aaKnown RBP9.68□□□□□ -0.86
PTCD1-205ENST00000485746 DLX4Q92988 240 aaPredicted RBP9.68□□□□□ -0.86
PTCD1-205ENST00000485746 RSRP1Q9BUV0 290 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 COMMD5Q9GZQ3 224 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 TMEM140Q9NV12 185 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 CEPT1Q9Y6K0 416 aa9.68□□□□□ -0.86
PTCD1-205ENST00000485746 DISC1C4P0D8 188 aa9.67□□□□□ -0.86
PTCD1-205ENST00000485746 UPK2O00526 184 aa9.67□□□□□ -0.86
PTCD1-205ENST00000485746 SAP30O75446 220 aa9.67□□□□□ -0.86
PTCD1-205ENST00000485746 DHFRP00374 187 aa9.67□□□□□ -0.86
PTCD1-205ENST00000485746 KRASP01116 189 aa9.67□□□□□ -0.86
PTCD1-205ENST00000485746 ZP3P21754 424 aa9.67□□□□□ -0.86
PTCD1-205ENST00000485746 ECI1P42126 302 aa9.67□□□□□ -0.86
PTCD1-205ENST00000485746 UCP3P55916 312 aa9.67□□□□□ -0.86
PTCD1-205ENST00000485746 RHOGP84095 191 aa9.67□□□□□ -0.86
PTCD1-205ENST00000485746 SSBP1Q04837 148 aaKnown RBP9.67□□□□□ -0.86
PTCD1-205ENST00000485746 TATDN3Q17R31 274 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms