RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 A0A1B0GU03 582 aa8.87□□□□□ -0.99
DDX56-212ENST00000485367 LOC102723971A0A1B0GUV8 181 aa8.87□□□□□ -0.99
DDX56-212ENST00000485367 C5orf63A6NC05 138 aa8.87□□□□□ -0.99
DDX56-212ENST00000485367 CD300LBA8K4G0 201 aa8.87□□□□□ -0.99
DDX56-212ENST00000485367 ZNF850A8MQ14 1090 aa8.87□□□□□ -0.99
DDX56-212ENST00000485367 IRF2P14316 349 aa8.87□□□□□ -0.99
DDX56-212ENST00000485367 CA6P23280 308 aa8.87□□□□□ -0.99
DDX56-212ENST00000485367 NKX2-1P43699 371 aaPredicted RBP8.87□□□□□ -0.99
DDX56-212ENST00000485367 RPL23AP62750 156 aaKnown RBP8.87□□□□□ -0.99
DDX56-212ENST00000485367 FAM57BQ71RH2 274 aa8.87□□□□□ -0.99
DDX56-212ENST00000485367 C6orf201Q7Z4U5 140 aa8.87□□□□□ -0.99
DDX56-212ENST00000485367 C1QL2Q7Z5L3 287 aa8.87□□□□□ -0.99
DDX56-212ENST00000485367 H1FOOQ8IZA3 346 aaPredicted RBP8.87□□□□□ -0.99
DDX56-212ENST00000485367 ZNF418Q8TF45 676 aaPredicted RBP8.87□□□□□ -0.99
DDX56-212ENST00000485367 SPSB1Q96BD6 273 aa8.87□□□□□ -0.99
DDX56-212ENST00000485367 PGAM5Q96HS1 289 aa8.87□□□□□ -0.99
DDX56-212ENST00000485367 ZNF319Q9P2F9 582 aa8.87□□□□□ -0.99
DDX56-212ENST00000485367 RNF150Q9ULK6 438 aa8.87□□□□□ -0.99
DDX56-212ENST00000485367 DOCK11Q5JSL3 2073 aa8.87□□□□□ -0.99
DDX56-212ENST00000485367 TRAPPC2LH3BP13 241 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 GEMIN2O14893 280 aaKnown RBP8.86□□□□□ -0.99
DDX56-212ENST00000485367 DFFBO76075 338 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 VENTXO95231 258 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 ANOS1P23352 680 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 OTX1P32242 354 aaPredicted RBP8.86□□□□□ -0.99
DDX56-212ENST00000485367 FAM201AQ5SY85 155 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 GFI1BQ5VTD9 330 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 PRAMEF6Q5VXH4 476 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 OR11L1Q8NGX0 322 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 TOMM40LQ969M1 308 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 TMEM56Q96MV1 263 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 SNHG12Q9BXW3 62 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 SRD5A3Q9H8P0 318 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 URGCP-MRPS24S4R325 110 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 TMEM56-RWDD3S4R434 201 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 PPIAL4EA0A075B759 164 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 PPIAL4CA0A0B4J2A2 164 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 A0A1W2PPQ1 181 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 IGSF23A1L1A6 192 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 PPIAL4DF5H284 164 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 SNRPCP09234 159 aaKnown RBP8.86□□□□□ -0.99
DDX56-212ENST00000485367 WNT2P09544 360 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 PPIAL4FP0DN26 164 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 TAS2R30P59541 319 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 VAMP2P63027 116 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 IL24Q13007 206 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 PMS2P11Q13670 270 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 SP6Q3SY56 376 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 C5orf24Q7Z6I8 188 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 CMTM1Q8IZ96 169 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 TMEM252Q8N6L7 170 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.86□□□□□ -0.99
DDX56-212ENST00000485367 OR10A7Q8NGE5 316 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 ACY3Q96HD9 319 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 ZNF286AQ9HBT8 521 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 PPIAL4AQ9Y536 164 aa8.86□□□□□ -0.99
DDX56-212ENST00000485367 A0A1W2PN81 502 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 FAM24AA6NFZ4 105 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 GZMBP10144 247 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 CHRNA7P36544 502 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 GATA4P43694 442 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 CDKN1BP46527 198 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 HERV-K104P61576 105 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 ZNF154Q13106 437 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 FAM90A2PQ658T7 463 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 ASCL4Q6XD76 172 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 SLC25A26Q70HW3 274 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 ZNF664Q8N3J9 261 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 SLC35G3Q8N808 338 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 DEFB108BQ8NET1 73 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 OR5D18Q8NGL1 313 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 C22orf15Q8WYQ4 148 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 ATP5SQ99766 215 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 PYGO2Q9BRQ0 406 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 TMEM222Q9H0R3 208 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 ELL3Q9HB65 397 aaPredicted RBP8.85□□□□□ -0.99
DDX56-212ENST00000485367 VAX2Q9UIW0 290 aa8.85□□□□□ -0.99
DDX56-212ENST00000485367 C3orf85A0A1B0GTC6 90 aa8.84□□□□□ -0.99
DDX56-212ENST00000485367 A0A1B0GV50 99 aa8.84□□□□□ -0.99
DDX56-212ENST00000485367 CIDEAO60543 219 aa8.84□□□□□ -0.99
DDX56-212ENST00000485367 RPLP1P05386 114 aaKnown RBP8.84□□□□□ -0.99
DDX56-212ENST00000485367 RBX1P62877 108 aa8.84□□□□□ -0.99
DDX56-212ENST00000485367 OR56B2PQ8NGI1 322 aa8.84□□□□□ -0.99
DDX56-212ENST00000485367 OR5C1Q8NGR4 320 aa8.84□□□□□ -0.99
DDX56-212ENST00000485367 OR1P1Q8NH06 330 aa8.84□□□□□ -0.99
DDX56-212ENST00000485367 Q8TCH9 128 aa8.84□□□□□ -0.99
DDX56-212ENST00000485367 NEIL1Q96FI4 390 aaPredicted RBP8.84□□□□□ -0.99
DDX56-212ENST00000485367 LYZL4Q96KX0 146 aa8.84□□□□□ -0.99
DDX56-212ENST00000485367 CABLES2Q9BTV7 478 aa8.84□□□□□ -0.99
DDX56-212ENST00000485367 SSBP3Q9BWW4 388 aaPredicted RBP8.84□□□□□ -0.99
DDX56-212ENST00000485367 SDF2L1Q9HCN8 221 aa8.84□□□□□ -0.99
DDX56-212ENST00000485367 RNF7Q9UBF6 113 aa8.84□□□□□ -0.99
DDX56-212ENST00000485367 OR14J1Q9UGF5 321 aa8.84□□□□□ -0.99
DDX56-212ENST00000485367 SLC7A11Q9UPY5 501 aa8.84□□□□□ -0.99
DDX56-212ENST00000485367 POLR3KQ9Y2Y1 108 aaPredicted RBP8.84□□□□□ -0.99
DDX56-212ENST00000485367 INSIG2Q9Y5U4 225 aa8.84□□□□□ -0.99
DDX56-212ENST00000485367 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.84□□□□□ -1
DDX56-212ENST00000485367 ANKRD30BLA7E2S9 258 aa8.84□□□□□ -1
DDX56-212ENST00000485367 MPPED1O15442 326 aa8.84□□□□□ -1
DDX56-212ENST00000485367 FSHBP01225 129 aa8.84□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms