RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 EBI3Q14213 229 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 AARDQ4LEZ3 155 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 THOC7Q6I9Y2 204 aaKnown RBP11.62□□□□□ -0.55
LRIF1-202ENST00000485275 FOXRED2Q8IWF2 684 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 FAM71E2Q8N5Q1 922 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 SPIN2AQ99865 258 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 SPIN2BQ9BPZ2 258 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 RNF126Q9BV68 326 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 MAGT1Q9H0U3 335 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 MEGF9Q9H1U4 602 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 COA4Q9NYJ1 87 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 BET1LQ9NYM9 111 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 NUP50Q9UKX7 468 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 HIVEP1P15822 2718 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 C15orf61A6NNL5 157 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 MOSP00540 346 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 S100A10P60903 97 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 UBE2KP61086 200 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 POLR2GP62487 172 aaKnown RBP eCLIP11.62□□□□□ -0.55
LRIF1-202ENST00000485275 SSBP2P81877 361 aaPredicted RBP11.62□□□□□ -0.55
LRIF1-202ENST00000485275 ID3Q02535 119 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 PJVKQ0ZLH3 352 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 PSG5Q15238 335 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 DEFB112Q30KQ8 113 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 OR1S1Q8NH92 325 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 NANPQ8TBE9 248 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 ZNF48Q96MX3 618 aaPredicted RBP11.62□□□□□ -0.55
LRIF1-202ENST00000485275 C11orf1Q9H5F2 150 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 PLSCR3Q9NRY6 295 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 MBD2Q9UBB5 411 aa11.62□□□□□ -0.55
LRIF1-202ENST00000485275 PIGBOS1A0A0B4J2F0 54 aa11.61□□□□□ -0.55
LRIF1-202ENST00000485275 UPK2O00526 184 aa11.61□□□□□ -0.55
LRIF1-202ENST00000485275 ST8SIA3O43173 380 aa11.61□□□□□ -0.55
LRIF1-202ENST00000485275 ATG12O94817 140 aa11.61□□□□□ -0.55
LRIF1-202ENST00000485275 TMEM50AO95807 157 aa11.61□□□□□ -0.55
LRIF1-202ENST00000485275 HNRNPCP07910 306 aaKnown RBP eCLIP11.61□□□□□ -0.552e-6■■□□□ 13.2
LRIF1-202ENST00000485275 PSMB6P28072 239 aa11.61□□□□□ -0.55
LRIF1-202ENST00000485275 NKX2-1P43699 371 aaPredicted RBP11.61□□□□□ -0.55
LRIF1-202ENST00000485275 CYCSP99999 105 aaKnown RBP11.61□□□□□ -0.55
LRIF1-202ENST00000485275 HES1Q14469 280 aa11.61□□□□□ -0.55
LRIF1-202ENST00000485275 ZFP69Q49AA0 526 aa11.61□□□□□ -0.55
LRIF1-202ENST00000485275 SPINK9Q5DT21 86 aa11.61□□□□□ -0.55
LRIF1-202ENST00000485275 FBXL15Q9H469 300 aa11.61□□□□□ -0.55
LRIF1-202ENST00000485275 LSM5Q9Y4Y9 91 aaKnown RBP11.61□□□□□ -0.55
LRIF1-202ENST00000485275 POMT1Q9Y6A1 747 aa11.61□□□□□ -0.55
LRIF1-202ENST00000485275 E7EUB6 86 aa11.6□□□□□ -0.55
LRIF1-202ENST00000485275 NDUFA3O95167 84 aa11.6□□□□□ -0.55
LRIF1-202ENST00000485275 LGALS7P47929 136 aa11.6□□□□□ -0.55
LRIF1-202ENST00000485275 MMDQ15546 238 aa11.6□□□□□ -0.55
LRIF1-202ENST00000485275 C10orf55Q5SWW7 151 aa11.6□□□□□ -0.55
LRIF1-202ENST00000485275 SPNS3Q6ZMD2 512 aa11.6□□□□□ -0.55
LRIF1-202ENST00000485275 C9orf139Q6ZV77 190 aa11.6□□□□□ -0.55
LRIF1-202ENST00000485275 NOXA1Q86UR1 476 aa11.6□□□□□ -0.55
LRIF1-202ENST00000485275 OR2T10Q8NGZ9 312 aa11.6□□□□□ -0.55
LRIF1-202ENST00000485275 TMEM167AQ8TBQ9 72 aa11.6□□□□□ -0.55
LRIF1-202ENST00000485275 ZDHHC16Q969W1 377 aa11.6□□□□□ -0.55
LRIF1-202ENST00000485275 ZNF430Q9H8G1 570 aaPredicted RBP11.6□□□□□ -0.55
LRIF1-202ENST00000485275 TMEM14BQ9NUH8 114 aa11.6□□□□□ -0.55
LRIF1-202ENST00000485275 HSPB7Q9UBY9 170 aa11.6□□□□□ -0.55
LRIF1-202ENST00000485275 A0A1B0GW64 132 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 SSSCA1O60232 199 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 DEDDO75618 318 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 FBP1P09467 338 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 TMEM11P17152 192 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 DYNLT3P51808 116 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 TNFRSF9Q07011 255 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 THNSL2Q86YJ6 484 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 NPBQ8NG41 125 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 SSX3Q99909 188 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.59□□□□□ -0.55
LRIF1-202ENST00000485275 METTL1Q9UBP6 276 aaKnown RBP11.59□□□□□ -0.55
LRIF1-202ENST00000485275 FOXA2Q9Y261 457 aaPredicted RBP11.59□□□□□ -0.55
LRIF1-202ENST00000485275 SIGLEC9Q9Y336 463 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 CGB1A6NKQ9 187 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 FCN1O00602 326 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 NBR2O15453 112 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 OPN1MWP04001 364 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 OPN1MW2P0DN77 364 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 OPN1MW3P0DN78 364 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 LYL1P12980 280 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 PAX9P55771 341 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 VMA21Q3ZAQ7 101 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 PRSS54Q6PEW0 395 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 ZNF429Q86V71 674 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 TMEM219Q86XT9 240 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 OR4A16Q8NH70 328 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 TSNAXQ99598 290 aaKnown RBP11.59□□□□□ -0.55
LRIF1-202ENST00000485275 RNF5Q99942 180 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 TMUB1Q9BVT8 246 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 YAE1D1Q9NRH1 226 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 FAM96BQ9Y3D0 163 aa11.59□□□□□ -0.55
LRIF1-202ENST00000485275 FXYD6-FXYD2A0A087WZ82 144 aa11.58□□□□□ -0.56
LRIF1-202ENST00000485275 MSGN1A6NI15 193 aa11.58□□□□□ -0.56
LRIF1-202ENST00000485275 H3BUX3 64 aa11.58□□□□□ -0.56
LRIF1-202ENST00000485275 RRHO14718 337 aa11.58□□□□□ -0.56
LRIF1-202ENST00000485275 RBMXL2O75526 392 aaKnown RBP11.58□□□□□ -0.56
LRIF1-202ENST00000485275 OR2F2O95006 317 aa11.58□□□□□ -0.56
LRIF1-202ENST00000485275 LY6G6DO95868 133 aa11.58□□□□□ -0.56
LRIF1-202ENST00000485275 BRS3P32247 399 aa11.58□□□□□ -0.56
LRIF1-202ENST00000485275 BPIFB3P59826 476 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms