RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 COA4Q9NYJ1 87 aa12.61□□□□□ -0.39
DDR1-246ENST00000485023 RSL24D1Q9UHA3 163 aaKnown RBP12.61□□□□□ -0.39
DDR1-246ENST00000485023 NOTCH1P46531 2555 aa12.6□□□□□ -0.39
DDR1-246ENST00000485023 GABARAPH6UMI1 98 aa12.6□□□□□ -0.39
DDR1-246ENST00000485023 PPP5CP53041 499 aa12.6□□□□□ -0.39
DDR1-246ENST00000485023 OR4A47Q6IF82 309 aa12.6□□□□□ -0.39
DDR1-246ENST00000485023 FAAP20Q6NZ36 180 aa12.6□□□□□ -0.39
DDR1-246ENST00000485023 PUSL1Q8N0Z8 303 aaKnown RBP12.6□□□□□ -0.39
DDR1-246ENST00000485023 VSTM2AQ8TAG5 236 aa12.6□□□□□ -0.39
DDR1-246ENST00000485023 FYTTD1Q96QD9 318 aaKnown RBP12.6□□□□□ -0.39
DDR1-246ENST00000485023 PLXNB1O43157 2135 aa12.59□□□□□ -0.39
DDR1-246ENST00000485023 I3L521 148 aa12.59□□□□□ -0.39
DDR1-246ENST00000485023 RBFOX2O43251 390 aaKnown RBP eCLIP12.59□□□□□ -0.39
DDR1-246ENST00000485023 TPPPO94811 219 aa12.59□□□□□ -0.39
DDR1-246ENST00000485023 HPRT1P00492 218 aa12.59□□□□□ -0.39
DDR1-246ENST00000485023 PGAM2P15259 253 aa12.59□□□□□ -0.39
DDR1-246ENST00000485023 PI3P19957 117 aa12.59□□□□□ -0.39
DDR1-246ENST00000485023 TNFSF8P32971 234 aa12.59□□□□□ -0.39
DDR1-246ENST00000485023 TAS2R19P59542 299 aa12.59□□□□□ -0.39
DDR1-246ENST00000485023 SCGB2B2Q4G0G5 96 aa12.59□□□□□ -0.39
DDR1-246ENST00000485023 TMEM229BQ8NBD8 167 aa12.59□□□□□ -0.39
DDR1-246ENST00000485023 DMBX1Q8NFW5 382 aa12.59□□□□□ -0.39
DDR1-246ENST00000485023 OR1N2Q8NGR9 330 aa12.59□□□□□ -0.39
DDR1-246ENST00000485023 TMEM167AQ8TBQ9 72 aa12.59□□□□□ -0.39
DDR1-246ENST00000485023 SMIM4Q8WVI0 70 aa12.59□□□□□ -0.39
DDR1-246ENST00000485023 RCC1LQ96I51 464 aaKnown RBP12.59□□□□□ -0.39
DDR1-246ENST00000485023 TRAV3A0A0B4J244 114 aa12.58□□□□□ -0.4
DDR1-246ENST00000485023 HMX3A6NHT5 357 aa12.58□□□□□ -0.4
DDR1-246ENST00000485023 RAB3DO95716 219 aa12.58□□□□□ -0.4
DDR1-246ENST00000485023 PRH1P02810 166 aa12.58□□□□□ -0.4
DDR1-246ENST00000485023 F2RP25116 425 aa12.58□□□□□ -0.4
DDR1-246ENST00000485023 HOXD3P31249 432 aaPredicted RBP12.58□□□□□ -0.4
DDR1-246ENST00000485023 LPAR6P43657 344 aa12.58□□□□□ -0.4
DDR1-246ENST00000485023 TAS2R31P59538 309 aa12.58□□□□□ -0.4
DDR1-246ENST00000485023 MRPS10P82664 201 aaKnown RBP12.58□□□□□ -0.4
DDR1-246ENST00000485023 FOXB2Q5VYV0 432 aa12.58□□□□□ -0.4
DDR1-246ENST00000485023 STEAP1BQ6NZ63 245 aa12.58□□□□□ -0.4
DDR1-246ENST00000485023 TBC1D26Q86UD7 250 aa12.58□□□□□ -0.4
DDR1-246ENST00000485023 SLC38A6Q8IZM9 456 aa12.58□□□□□ -0.4
DDR1-246ENST00000485023 DGCR14Q96DF8 476 aaKnown RBP12.58□□□□□ -0.4
DDR1-246ENST00000485023 RSRP1Q9BUV0 290 aa12.58□□□□□ -0.4
DDR1-246ENST00000485023 NXF2Q9GZY0 626 aaKnown RBP12.58□□□□□ -0.4
DDR1-246ENST00000485023 SLA2Q9H6Q3 261 aa12.58□□□□□ -0.4
DDR1-246ENST00000485023 TMEM140Q9NV12 185 aa12.58□□□□□ -0.4
DDR1-246ENST00000485023 IGHV4OR15-8A0A075B7B6 117 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 A0A087WW49 117 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 FABP12A6NFH5 140 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 LGALS1P09382 135 aaKnown RBP12.57□□□□□ -0.4
DDR1-246ENST00000485023 OR9G9P0C7N8 305 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 NQO2P16083 231 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 TBPP20226 339 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 S100GP29377 79 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 RPL27AP46776 148 aaKnown RBP12.57□□□□□ -0.4
DDR1-246ENST00000485023 RPL8P62917 257 aaKnown RBP12.57□□□□□ -0.4
DDR1-246ENST00000485023 ZNF616Q08AN1 781 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 FHL3Q13643 280 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 KPRPQ5T749 579 aaPredicted RBP12.57□□□□□ -0.4
DDR1-246ENST00000485023 LPCAT3Q6P1A2 487 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 C19orf35Q6ZS72 473 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 ARRDC1Q8N5I2 433 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 CD300LFQ8TDQ1 290 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 DPF1Q92782 380 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 SPIN2AQ99865 258 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 SPIN2BQ9BPZ2 258 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 PLEKHA2Q9HB19 425 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 BET1LQ9NYM9 111 aa12.57□□□□□ -0.4
DDR1-246ENST00000485023 C13orf42A0A1B0GVH6 325 aa12.56□□□□□ -0.4
DDR1-246ENST00000485023 E7EUB6 86 aa12.56□□□□□ -0.4
DDR1-246ENST00000485023 CD74P04233 296 aa12.56□□□□□ -0.4
DDR1-246ENST00000485023 HLA-GP17693 338 aa12.56□□□□□ -0.4
DDR1-246ENST00000485023 SLURP1P55000 103 aa12.56□□□□□ -0.4
DDR1-246ENST00000485023 ERVK-16P61578 105 aa12.56□□□□□ -0.4
DDR1-246ENST00000485023 RUNX1Q01196 453 aa12.56□□□□□ -0.4
DDR1-246ENST00000485023 LHFPL1Q86WI0 220 aa12.56□□□□□ -0.4
DDR1-246ENST00000485023 ADAD2Q8NCV1 583 aaKnown RBP12.56□□□□□ -0.4
DDR1-246ENST00000485023 TMEM68Q96MH6 324 aa12.56□□□□□ -0.4
DDR1-246ENST00000485023 AIFM2Q9BRQ8 373 aa12.56□□□□□ -0.4
DDR1-246ENST00000485023 SLC2A9Q9NRM0 540 aa12.56□□□□□ -0.4
DDR1-246ENST00000485023 COMMD9Q9P000 198 aa12.56□□□□□ -0.4
DDR1-246ENST00000485023 A0A1B0GW64 132 aa12.55□□□□□ -0.4
DDR1-246ENST00000485023 DPPA5A6NC42 116 aa12.55□□□□□ -0.4
DDR1-246ENST00000485023 MARCH11A6NNE9 402 aa12.55□□□□□ -0.4
DDR1-246ENST00000485023 TEX22C9J3V5 150 aa12.55□□□□□ -0.4
DDR1-246ENST00000485023 H3BUA1 57 aa12.55□□□□□ -0.4
DDR1-246ENST00000485023 UPK2O00526 184 aa12.55□□□□□ -0.4
DDR1-246ENST00000485023 CTDSPLO15194 276 aa12.55□□□□□ -0.4
DDR1-246ENST00000485023 RBMXL2O75526 392 aaKnown RBP12.55□□□□□ -0.4
DDR1-246ENST00000485023 DUS4LO95620 317 aaKnown RBP12.55□□□□□ -0.4
DDR1-246ENST00000485023 KRASP01116 189 aa12.55□□□□□ -0.4
DDR1-246ENST00000485023 IL6RP08887 468 aaPredicted RBP12.55□□□□□ -0.4
DDR1-246ENST00000485023 OR8U8P0C7N1 319 aa12.55□□□□□ -0.4
DDR1-246ENST00000485023 G6PCP35575 357 aa12.55□□□□□ -0.4
DDR1-246ENST00000485023 UCP3P55916 312 aa12.55□□□□□ -0.4
DDR1-246ENST00000485023 ZNF585BQ52M93 769 aa12.55□□□□□ -0.4
DDR1-246ENST00000485023 PDLIM3Q53GG5 364 aaPredicted RBP12.55□□□□□ -0.4
DDR1-246ENST00000485023 OR4C16Q8NGL9 310 aa12.55□□□□□ -0.4
DDR1-246ENST00000485023 OR4A5Q8NH83 315 aa12.55□□□□□ -0.4
DDR1-246ENST00000485023 ANKRD34BA5PLL1 514 aa12.54□□□□□ -0.4
DDR1-246ENST00000485023 LINC01619G3V211 115 aa12.54□□□□□ -0.4
DDR1-246ENST00000485023 REG1AP05451 166 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 704.9 ms