RNA–Protein interactions for RNA: ENST00000484986.1

PTPRN-215, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-215ENST00000484986 FBXL7Q9UJT9 491 aa16.7■□□□□ 0.26
PTPRN-215ENST00000484986 HMX3A6NHT5 357 aa16.69■□□□□ 0.26
PTPRN-215ENST00000484986 NOTOA8MTQ0 251 aa16.69■□□□□ 0.26
PTPRN-215ENST00000484986 OR11H12B2RN74 326 aa16.69■□□□□ 0.26
PTPRN-215ENST00000484986 TEX22C9J3V5 150 aa16.69■□□□□ 0.26
PTPRN-215ENST00000484986 PPP5D1E7EU14 171 aa16.69■□□□□ 0.26
PTPRN-215ENST00000484986 OR2C1O95371 312 aa16.69■□□□□ 0.26
PTPRN-215ENST00000484986 ATP6V1G2O95670 118 aa16.69■□□□□ 0.26
PTPRN-215ENST00000484986 IGLV2-14P01704 120 aa16.69■□□□□ 0.26
PTPRN-215ENST00000484986 CD7P09564 240 aa16.69■□□□□ 0.26
PTPRN-215ENST00000484986 GNG2P59768 71 aa16.69■□□□□ 0.26
PTPRN-215ENST00000484986 SLC16A13Q7RTY0 426 aa16.69■□□□□ 0.26
PTPRN-215ENST00000484986 NR2C2APQ86WQ0 139 aa16.69■□□□□ 0.26
PTPRN-215ENST00000484986 DEFB125Q8N687 156 aa16.69■□□□□ 0.26
PTPRN-215ENST00000484986 CNBD2Q96M20 576 aa16.69■□□□□ 0.26
PTPRN-215ENST00000484986 FYTTD1Q96QD9 318 aaKnown RBP16.69■□□□□ 0.26
PTPRN-215ENST00000484986 SRD5A3Q9H8P0 318 aa16.69■□□□□ 0.26
PTPRN-215ENST00000484986 DMRT1Q9Y5R6 373 aa16.69■□□□□ 0.26
PTPRN-215ENST00000484986 HRASP01112 189 aa16.68■□□□□ 0.26
PTPRN-215ENST00000484986 ZNF735P0CB33 412 aa16.68■□□□□ 0.26
PTPRN-215ENST00000484986 FAM106AQ4KMX7 169 aa16.68■□□□□ 0.26
PTPRN-215ENST00000484986 ZNF66Q6ZN08 573 aa16.68■□□□□ 0.26
PTPRN-215ENST00000484986 PUSL1Q8N0Z8 303 aaKnown RBP16.68■□□□□ 0.26
PTPRN-215ENST00000484986 AIFM2Q9BRQ8 373 aa16.68■□□□□ 0.26
PTPRN-215ENST00000484986 SPATA2Q9UM82 520 aa16.68■□□□□ 0.26
PTPRN-215ENST00000484986 IGKV1D-13A0A0B4J2D9 117 aa16.67■□□□□ 0.26
PTPRN-215ENST00000484986 RBMY1BA6NDE4 496 aaKnown RBP16.67■□□□□ 0.26
PTPRN-215ENST00000484986 RBMY1EA6NEQ0 496 aaKnown RBP16.67■□□□□ 0.26
PTPRN-215ENST00000484986 MRPS14O60783 128 aaKnown RBP16.67■□□□□ 0.26
PTPRN-215ENST00000484986 HLA-AP01891 365 aaKnown RBP16.67■□□□□ 0.26
PTPRN-215ENST00000484986 CRYGCP07315 174 aa16.67■□□□□ 0.26
PTPRN-215ENST00000484986 RBMY1DP0C7P1 496 aaKnown RBP16.67■□□□□ 0.26
PTPRN-215ENST00000484986 IGKV1-13P0DP09 117 aa16.67■□□□□ 0.26
PTPRN-215ENST00000484986 HIST1H1BP16401 226 aaKnown RBP16.67■□□□□ 0.26
PTPRN-215ENST00000484986 CBLN1P23435 193 aa16.67■□□□□ 0.26
PTPRN-215ENST00000484986 ARL3P36405 182 aa16.67■□□□□ 0.26
PTPRN-215ENST00000484986 NUDCD2Q8WVJ2 157 aa16.67■□□□□ 0.26
PTPRN-215ENST00000484986 EEF1AKMT3Q96AZ1 226 aa16.67■□□□□ 0.26
PTPRN-215ENST00000484986 FAM110AQ9BQ89 295 aa16.67■□□□□ 0.26
PTPRN-215ENST00000484986 ANXA10Q9UJ72 324 aa16.67■□□□□ 0.26
PTPRN-215ENST00000484986 TMEM235A6NFC5 223 aa16.66■□□□□ 0.26
PTPRN-215ENST00000484986 IL6RP08887 468 aaPredicted RBP16.66■□□□□ 0.26
PTPRN-215ENST00000484986 PSMB6P28072 239 aa16.66■□□□□ 0.26
PTPRN-215ENST00000484986 FGF9P31371 208 aaPredicted RBP16.66■□□□□ 0.26
PTPRN-215ENST00000484986 EIF4EBP1Q13541 118 aaPredicted RBP16.66■□□□□ 0.26
PTPRN-215ENST00000484986 OR4A47Q6IF82 309 aa16.66■□□□□ 0.26
PTPRN-215ENST00000484986 IZUMO2Q6UXV1 221 aa16.66■□□□□ 0.26
PTPRN-215ENST00000484986 TPRA1Q86W33 373 aa16.66■□□□□ 0.26
PTPRN-215ENST00000484986 MFSD4AQ8N468 514 aa16.66■□□□□ 0.26
PTPRN-215ENST00000484986 WDR89Q96FK6 387 aaPredicted RBP16.66■□□□□ 0.26
PTPRN-215ENST00000484986 BIRC6Q9NR09 4857 aa16.66■□□□□ 0.26
PTPRN-215ENST00000484986 TAS2R8Q9NYW2 309 aa16.66■□□□□ 0.26
PTPRN-215ENST00000484986 RRP15Q9Y3B9 282 aaKnown RBP16.66■□□□□ 0.26
PTPRN-215ENST00000484986 DEFA4P12838 97 aa16.65■□□□□ 0.26
PTPRN-215ENST00000484986 RPL8P62917 257 aaKnown RBP16.65■□□□□ 0.26
PTPRN-215ENST00000484986 MSMO1Q15800 293 aa16.65■□□□□ 0.26
PTPRN-215ENST00000484986 KLK9Q2XQG4 91 aa16.65■□□□□ 0.26
PTPRN-215ENST00000484986 ANKRD55Q3KP44 614 aa16.65■□□□□ 0.26
PTPRN-215ENST00000484986 ZNF57Q68EA5 555 aaPredicted RBP16.65■□□□□ 0.26
PTPRN-215ENST00000484986 CLEC19AQ6UXS0 136 aa16.65■□□□□ 0.26
PTPRN-215ENST00000484986 OR4A5Q8NH83 315 aa16.65■□□□□ 0.26
PTPRN-215ENST00000484986 FANCD2OSQ96PS1 177 aa16.65■□□□□ 0.26
PTPRN-215ENST00000484986 DAPK2Q9UIK4 370 aa16.65■□□□□ 0.26
PTPRN-215ENST00000484986 KLK9Q9UKQ9 250 aa16.65■□□□□ 0.26
PTPRN-215ENST00000484986 HYDINQ4G0P3 5121 aa16.65■□□□□ 0.26
PTPRN-215ENST00000484986 TRBV7-1A0A0A6YYK4 115 aa16.64■□□□□ 0.25
PTPRN-215ENST00000484986 ZNF320A2RRD8 509 aa16.64■□□□□ 0.25
PTPRN-215ENST00000484986 SMIM30A4D0T7 59 aa16.64■□□□□ 0.25
PTPRN-215ENST00000484986 NDUFB8O95169 186 aa16.64■□□□□ 0.25
PTPRN-215ENST00000484986 GABARAPL2P60520 117 aa16.64■□□□□ 0.25
PTPRN-215ENST00000484986 CXorf58Q96LI9 332 aa16.64■□□□□ 0.25
PTPRN-215ENST00000484986 CCDC140Q96MF4 163 aa16.64■□□□□ 0.25
PTPRN-215ENST00000484986 WFDC10AQ9H1F0 79 aa16.64■□□□□ 0.25
PTPRN-215ENST00000484986 TXNL4BQ9NX01 149 aaKnown RBP16.64■□□□□ 0.25
PTPRN-215ENST00000484986 A8MWP6 167 aa16.63■□□□□ 0.25
PTPRN-215ENST00000484986 E7EUB6 86 aa16.63■□□□□ 0.25
PTPRN-215ENST00000484986 AREGP15514 252 aa16.63■□□□□ 0.25
PTPRN-215ENST00000484986 CTRB1P17538 263 aa16.63■□□□□ 0.25
PTPRN-215ENST00000484986 HLA-GP17693 338 aa16.63■□□□□ 0.25
PTPRN-215ENST00000484986 BRWD1-AS2P59051 145 aa16.63■□□□□ 0.25
PTPRN-215ENST00000484986 ARPC4P59998 168 aa16.63■□□□□ 0.25
PTPRN-215ENST00000484986 UBE2UQ5VVX9 321 aa16.63■□□□□ 0.25
PTPRN-215ENST00000484986 CTRB2Q6GPI1 263 aa16.63■□□□□ 0.25
PTPRN-215ENST00000484986 C19orf35Q6ZS72 473 aa16.63■□□□□ 0.25
PTPRN-215ENST00000484986 ZBTB34Q8NCN2 500 aa16.63■□□□□ 0.25
PTPRN-215ENST00000484986 BET1LQ9NYM9 111 aa16.63■□□□□ 0.25
PTPRN-215ENST00000484986 TMEM213A2RRL7 107 aa16.62■□□□□ 0.25
PTPRN-215ENST00000484986 SSX5O60225 188 aa16.62■□□□□ 0.25
PTPRN-215ENST00000484986 IGHV3-23P01764 117 aa16.62■□□□□ 0.25
PTPRN-215ENST00000484986 EDN2P20800 178 aa16.62■□□□□ 0.25
PTPRN-215ENST00000484986 SSX9Q7RTT3 188 aa16.62■□□□□ 0.25
PTPRN-215ENST00000484986 TMEM61Q8N0U2 210 aa16.62■□□□□ 0.25
PTPRN-215ENST00000484986 OR52B4Q8NGK2 314 aa16.62■□□□□ 0.25
PTPRN-215ENST00000484986 FCGR1BQ92637 280 aa16.62■□□□□ 0.25
PTPRN-215ENST00000484986 MARC2Q969Z3 335 aa16.62■□□□□ 0.25
PTPRN-215ENST00000484986 RHBDL2Q9NX52 303 aa16.62■□□□□ 0.25
PTPRN-215ENST00000484986 RAB26Q9ULW5 256 aa16.62■□□□□ 0.25
PTPRN-215ENST00000484986 SSR3Q9UNL2 185 aa16.62■□□□□ 0.25
PTPRN-215ENST00000484986 A0A1B0GW64 132 aa16.61■□□□□ 0.25
PTPRN-215ENST00000484986 RBFOX2O43251 390 aaKnown RBP eCLIP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms